RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 USP17L19D6RCP7 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L20D6RJB6 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 RASA1P20936 1047 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 PIP4K2BP78356 416 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L24Q0WX57 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 EMID1Q96A84 441 aaPredicted RBP9□□□□□ -0.97
SF3B3-214ENST00000572365 KCTD15Q96SI1 283 aaPredicted RBP9□□□□□ -0.97
SF3B3-214ENST00000572365 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
SF3B3-214ENST00000572365 NOD1Q9Y239 953 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 FER1L4A9Z1Z3 1794 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 YEATS2Q9ULM3 1422 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 BRD1O95696 1058 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
SF3B3-214ENST00000572365 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 CDK15Q96Q40 435 aa8.99□□□□□ -0.97
SF3B3-214ENST00000572365 CARNS1A5YM72 827 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 HSPA1LP34931 641 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 RANGAP1P46060 587 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-214ENST00000572365 CLDN10P78369 228 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 OXLD1Q5BKU9 147 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 RC3H1Q5TC82 1133 aaKnown RBP8.98□□□□□ -0.97
SF3B3-214ENST00000572365 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 AEBP1Q8IUX7 1158 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 MPNDQ8N594 471 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
SF3B3-214ENST00000572365 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-214ENST00000572365 UGGT2Q9NYU1 1516 aa8.97□□□□□ -0.97
SF3B3-214ENST00000572365 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
SF3B3-214ENST00000572365 VASH1Q7L8A9 365 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-214ENST00000572365 PCDHB11Q9Y5F2 797 aa8.97□□□□□ -0.97
SF3B3-214ENST00000572365 USP4Q13107 963 aa8.96□□□□□ -0.98
SF3B3-214ENST00000572365 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.98
SF3B3-214ENST00000572365 ANKMY2Q8IV38 441 aa8.96□□□□□ -0.98
SF3B3-214ENST00000572365 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
SF3B3-214ENST00000572365 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
SF3B3-214ENST00000572365 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
SF3B3-214ENST00000572365 ATP10BO94823 1461 aa8.96□□□□□ -0.98
SF3B3-214ENST00000572365 SETD1BQ9UPS6 1966 aaKnown RBP8.95□□□□□ -0.98
SF3B3-214ENST00000572365 ABCA8O94911 1581 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 LTBP4Q8N2S1 1624 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 PREX1Q8TCU6 1659 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
SF3B3-214ENST00000572365 SIAH2O43255 324 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 GTF2IP78347 998 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 KCNA1Q09470 495 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 SIX5Q8N196 739 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 PCDHGA11Q9Y5H2 935 aa8.95□□□□□ -0.98
SF3B3-214ENST00000572365 ZNF335Q9H4Z2 1342 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-214ENST00000572365 WNT7AO00755 349 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-214ENST00000572365 DKK1O94907 266 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 SLC19A1P41440 591 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 GRM5P41594 1212 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 FAM200AQ8TCP9 573 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
SF3B3-214ENST00000572365 ERVH48-1M5A8F1 160 aa8.93□□□□□ -0.98
SF3B3-214ENST00000572365 DPYDQ12882 1025 aa8.93□□□□□ -0.98
SF3B3-214ENST00000572365 ZNF594Q96JF6 807 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-214ENST00000572365 KIAA1024Q9UPX6 916 aa8.93□□□□□ -0.98
SF3B3-214ENST00000572365 ABCA9Q8IUA7 1624 aa8.92□□□□□ -0.98
SF3B3-214ENST00000572365 POGZQ7Z3K3 1410 aa8.92□□□□□ -0.98
SF3B3-214ENST00000572365 RAB15P59190 212 aa8.92□□□□□ -0.98
SF3B3-214ENST00000572365 MED1Q15648 1581 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-214ENST00000572365 ARHGEF40Q8TER5 1519 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 FANCAO15360 1455 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 DENND4BO75064 1496 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-214ENST00000572365 ADH1CP00326 375 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 FSHRP23945 695 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 ERVK-9P63128 1117 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 SWI5Q1ZZU3 235 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 SPRYD7Q5W111 196 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 CLP1Q92989 425 aaKnown RBP8.91□□□□□ -0.98
SF3B3-214ENST00000572365 TLL2Q9Y6L7 1015 aa8.91□□□□□ -0.98
SF3B3-214ENST00000572365 NEO1Q92859 1461 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 RAPGEF2Q9Y4G8 1499 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 AKNAQ7Z591 1439 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 PHLDB1Q86UU1 1377 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-214ENST00000572365 SCTRP47872 440 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 DHX9Q08211 1270 aaKnown RBP8.9□□□□□ -0.98
SF3B3-214ENST00000572365 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
SF3B3-214ENST00000572365 UHRF1BP1Q6BDS2 1440 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 A0A0G2JS52 829 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 SEC13P55735 322 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 NR5A1Q13285 461 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 SLAIN2Q9P270 581 aa8.89□□□□□ -0.99
SF3B3-214ENST00000572365 TTC37Q6PGP7 1564 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 CC2D2BQ6DHV5 1058 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 PHLDB3Q6NSJ2 640 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
SF3B3-214ENST00000572365 PTPRTO14522 1441 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms