RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 MAP2P11137 1827 aaKnown RBP29.15■■■□□ 2.26
UBFD1-210ENST00000571064 FLT4P35916 1363 aa29.13■■■□□ 2.25
UBFD1-210ENST00000571064 LOC102724428A0A0B4J2F2 783 aa29.12■■■□□ 2.25
UBFD1-210ENST00000571064 SIK1P57059 783 aa29.12■■■□□ 2.25
UBFD1-210ENST00000571064 POLKQ9UBT6 870 aa29.11■■■□□ 2.25
UBFD1-210ENST00000571064 EMILIN1Q9Y6C2 1016 aa29.11■■■□□ 2.25
UBFD1-210ENST00000571064 APLP1P51693 650 aa29.1■■■□□ 2.25
UBFD1-210ENST00000571064 CICQ96RK0 1608 aaPredicted RBP29.09■■■□□ 2.25
UBFD1-210ENST00000571064 GNPATO15228 680 aa29.09■■■□□ 2.25
UBFD1-210ENST00000571064 NKX1-1Q15270 411 aaPredicted RBP29.09■■■□□ 2.25
UBFD1-210ENST00000571064 PKD1L3Q7Z443 1732 aa29.08■■■□□ 2.25
UBFD1-210ENST00000571064 ITPK1Q13572 414 aa29.08■■■□□ 2.25
UBFD1-210ENST00000571064 MMP10P09238 476 aa29.07■■■□□ 2.24
UBFD1-210ENST00000571064 DNAJC5GQ8N7S2 189 aa29.07■■■□□ 2.24
UBFD1-210ENST00000571064 ASAP1Q9ULH1 1129 aa29.07■■■□□ 2.24
UBFD1-210ENST00000571064 PXDNLA1KZ92 1463 aa29.06■■■□□ 2.24
UBFD1-210ENST00000571064 KIF24Q5T7B8 1368 aa29.06■■■□□ 2.24
UBFD1-210ENST00000571064 TOMM70O94826 608 aa29.05■■■□□ 2.24
UBFD1-210ENST00000571064 ATP6V1AP38606 617 aa29.04■■■□□ 2.24
UBFD1-210ENST00000571064 TMOD3Q9NYL9 352 aa29.04■■■□□ 2.24
UBFD1-210ENST00000571064 SPG7Q9UQ90 795 aa29.04■■■□□ 2.24
UBFD1-210ENST00000571064 BCS1LQ9Y276 419 aa29.04■■■□□ 2.24
UBFD1-210ENST00000571064 A0A0G2JLW4 131 aa29.02■■■□□ 2.24
UBFD1-210ENST00000571064 N4BP2Q86UW6 1770 aaPredicted RBP29.02■■■□□ 2.24
UBFD1-210ENST00000571064 KIAA1551Q9HCM1 1747 aa29.02■■■□□ 2.24
UBFD1-210ENST00000571064 PPM1GO15355 546 aaPredicted RBP29.01■■■□□ 2.23
UBFD1-210ENST00000571064 NMRK2Q9NPI5 230 aa29.01■■■□□ 2.23
UBFD1-210ENST00000571064 NCAPD2Q15021 1401 aa29.01■■■□□ 2.23
UBFD1-210ENST00000571064 PPP2R1AP30153 589 aa29■■■□□ 2.23
UBFD1-210ENST00000571064 TGFB2P61812 414 aa29■■■□□ 2.23
UBFD1-210ENST00000571064 ARHGAP27Q6ZUM4 889 aa29■■■□□ 2.23
UBFD1-210ENST00000571064 KIF13BQ9NQT8 1826 aa28.99■■■□□ 2.23
UBFD1-210ENST00000571064 MTHFSP49914 203 aa28.99■■■□□ 2.23
UBFD1-210ENST00000571064 ATG3Q9NT62 314 aa28.98■■■□□ 2.23
UBFD1-210ENST00000571064 PRKRIP1Q9H875 184 aaPredicted RBP28.97■■■□□ 2.23
UBFD1-210ENST00000571064 RALBP1Q15311 655 aa28.96■■■□□ 2.23
UBFD1-210ENST00000571064 C10orf71Q711Q0 1435 aa28.95■■■□□ 2.23
UBFD1-210ENST00000571064 DPEP1P16444 411 aa28.95■■■□□ 2.22
UBFD1-210ENST00000571064 TRAPPC3LQ5T215 181 aa28.95■■■□□ 2.22
UBFD1-210ENST00000571064 EYA1Q99502 592 aa28.95■■■□□ 2.22
UBFD1-210ENST00000571064 PHKG2P15735 406 aa28.94■■■□□ 2.22
UBFD1-210ENST00000571064 IFNL2Q8IZJ0 200 aa28.94■■■□□ 2.22
UBFD1-210ENST00000571064 NLGN1Q8N2Q7 840 aa28.94■■■□□ 2.22
UBFD1-210ENST00000571064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.94■■■□□ 2.223e-6■■□□□ 13.5
UBFD1-210ENST00000571064 RTCBQ9Y3I0 505 aaKnown RBP28.94■■■□□ 2.22
UBFD1-210ENST00000571064 FCHSD2O94868 740 aa28.93■■■□□ 2.22
UBFD1-210ENST00000571064 HTRA3P83110 453 aa28.92■■■□□ 2.22
UBFD1-210ENST00000571064 SLC4A9Q96Q91 983 aa28.92■■■□□ 2.22
UBFD1-210ENST00000571064 ARHGEF1Q92888 912 aaKnown RBP28.91■■■□□ 2.22
UBFD1-210ENST00000571064 CCDC87Q9NVE4 849 aa28.91■■■□□ 2.22
UBFD1-210ENST00000571064 KDRP35968 1356 aa28.9■■■□□ 2.22
UBFD1-210ENST00000571064 WDR90Q96KV7 1748 aa28.9■■■□□ 2.22
UBFD1-210ENST00000571064 EIF4A2Q14240 407 aaKnown RBP28.89■■■□□ 2.22
UBFD1-210ENST00000571064 C9orf131Q5VYM1 1079 aa28.89■■■□□ 2.22
UBFD1-210ENST00000571064 RBM46Q8TBY0 533 aaKnown RBP28.89■■■□□ 2.22
UBFD1-210ENST00000571064 RBM42Q9BTD8 480 aaKnown RBP28.89■■■□□ 2.22
UBFD1-210ENST00000571064 COL3A1P02461 1466 aaPredicted RBP28.89■■■□□ 2.22
UBFD1-210ENST00000571064 GYS1P13807 737 aa28.88■■■□□ 2.21
UBFD1-210ENST00000571064 C4AP0C0L4 1744 aa28.88■■■□□ 2.21
UBFD1-210ENST00000571064 KCNA3P22001 575 aa28.87■■■□□ 2.21
UBFD1-210ENST00000571064 MYBBP1AQ9BQG0 1328 aaKnown RBP28.87■■■□□ 2.21
UBFD1-210ENST00000571064 RFC4P35249 363 aa28.86■■■□□ 2.21
UBFD1-210ENST00000571064 C16orf71Q8IYS4 520 aaPredicted RBP28.86■■■□□ 2.21
UBFD1-210ENST00000571064 KLRG1Q96E93 195 aa28.86■■■□□ 2.21
UBFD1-210ENST00000571064 PARP3Q9Y6F1 533 aa28.86■■■□□ 2.21
UBFD1-210ENST00000571064 BRCA1P38398 1863 aaKnown RBP28.86■■■□□ 2.21
UBFD1-210ENST00000571064 ADRA2BP18089 450 aa28.85■■■□□ 2.21
UBFD1-210ENST00000571064 COL13A1Q5TAT6 717 aaPredicted RBP28.85■■■□□ 2.21
UBFD1-210ENST00000571064 RC3H1Q5TC82 1133 aaKnown RBP28.85■■■□□ 2.21
UBFD1-210ENST00000571064 IL13P35225 146 aa28.84■■■□□ 2.21
UBFD1-210ENST00000571064 RPS6KA4O75676 772 aa28.83■■■□□ 2.21
UBFD1-210ENST00000571064 ANP32CO43423 234 aa28.82■■■□□ 2.2
UBFD1-210ENST00000571064 CNTNAP4Q9C0A0 1308 aa28.82■■■□□ 2.2
UBFD1-210ENST00000571064 KCPQ6ZWJ8 1503 aa28.81■■■□□ 2.2
UBFD1-210ENST00000571064 PLEKHG2Q9H7P9 1386 aa28.81■■■□□ 2.2
UBFD1-210ENST00000571064 JMYQ8N9B5 988 aa28.81■■■□□ 2.2
UBFD1-210ENST00000571064 COL5A3P25940 1745 aaPredicted RBP28.8■■■□□ 2.2
UBFD1-210ENST00000571064 ERVV-2B6SEH9 535 aa28.8■■■□□ 2.2
UBFD1-210ENST00000571064 FSTL1Q12841 308 aa28.8■■■□□ 2.2
UBFD1-210ENST00000571064 PIM2Q9P1W9 311 aa28.8■■■□□ 2.2
UBFD1-210ENST00000571064 ZNF831Q5JPB2 1677 aa28.8■■■□□ 2.2
UBFD1-210ENST00000571064 ARFGEF1Q9Y6D6 1849 aa28.79■■■□□ 2.2
UBFD1-210ENST00000571064 DIAPH1O60610 1272 aaKnown RBP28.79■■■□□ 2.2
UBFD1-210ENST00000571064 DCAF5Q96JK2 942 aa28.79■■■□□ 2.2
UBFD1-210ENST00000571064 RRAGCQ9HB90 399 aa28.78■■■□□ 2.2
UBFD1-210ENST00000571064 RNF181Q9P0P0 153 aa28.78■■■□□ 2.2
UBFD1-210ENST00000571064 MYH14Q7Z406 1995 aaKnown RBP28.77■■■□□ 2.2
UBFD1-210ENST00000571064 KDM2BQ8NHM5 1336 aa28.77■■■□□ 2.2
UBFD1-210ENST00000571064 CAPN15O75808 1086 aa28.77■■■□□ 2.2
UBFD1-210ENST00000571064 DALRD3Q5D0E6 543 aaKnown RBP28.77■■■□□ 2.2
UBFD1-210ENST00000571064 DIEXFQ68CQ4 756 aaKnown RBP28.77■■■□□ 2.2
UBFD1-210ENST00000571064 CFAP53Q96M91 514 aa28.77■■■□□ 2.2
UBFD1-210ENST00000571064 SRP68Q9UHB9 627 aaKnown RBP28.76■■■□□ 2.19
UBFD1-210ENST00000571064 CHRNA5P30532 468 aa28.74■■■□□ 2.19
UBFD1-210ENST00000571064 DDR1Q08345 913 aa28.74■■■□□ 2.19
UBFD1-210ENST00000571064 FKBP8Q14318 412 aa28.74■■■□□ 2.19
UBFD1-210ENST00000571064 CABP4P57796 275 aa28.73■■■□□ 2.19
UBFD1-210ENST00000571064 CCDC184Q52MB2 194 aa28.73■■■□□ 2.19
UBFD1-210ENST00000571064 KDM6AO15550 1401 aaPredicted RBP28.72■■■□□ 2.19
UBFD1-210ENST00000571064 PTCD1O75127 700 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms