RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
TCF4-245ENST00000570177 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
TCF4-245ENST00000570177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.4
TCF4-245ENST00000570177 PCDHB15Q9Y5E8 787 aa12.55□□□□□ -0.4
TCF4-245ENST00000570177 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
TCF4-245ENST00000570177 RGS12O14924 1447 aa12.54□□□□□ -0.4
TCF4-245ENST00000570177 KCNQ3O43525 872 aa12.54□□□□□ -0.4
TCF4-245ENST00000570177 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TCF4-245ENST00000570177 CYP27B1O15528 508 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 ABCC4O15439 1325 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
TCF4-245ENST00000570177 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
TCF4-245ENST00000570177 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
TCF4-245ENST00000570177 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
TCF4-245ENST00000570177 MS4A1P11836 297 aa12.52□□□□□ -0.41
TCF4-245ENST00000570177 PHKG2P15735 406 aa12.52□□□□□ -0.41
TCF4-245ENST00000570177 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.41
TCF4-245ENST00000570177 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
TCF4-245ENST00000570177 SKAP1Q86WV1 359 aa12.52□□□□□ -0.41
TCF4-245ENST00000570177 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 CARD10Q9BWT7 1032 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
TCF4-245ENST00000570177 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 G2E3Q7L622 706 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
TCF4-245ENST00000570177 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
TCF4-245ENST00000570177 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
TCF4-245ENST00000570177 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
TCF4-245ENST00000570177 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
TCF4-245ENST00000570177 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
TCF4-245ENST00000570177 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
TCF4-245ENST00000570177 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
TCF4-245ENST00000570177 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 TMEM132AQ24JP5 1023 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
TCF4-245ENST00000570177 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 DDX19BQ9UMR2 479 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 TEFQ10587 303 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 ITPRIPQ8IWB1 547 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
TCF4-245ENST00000570177 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
TCF4-245ENST00000570177 TOM1O60784 492 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
TCF4-245ENST00000570177 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 MRC1P22897 1456 aa12.47□□□□□ -0.41
TCF4-245ENST00000570177 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
TCF4-245ENST00000570177 PTPRCP08575 1304 aa12.46□□□□□ -0.42
TCF4-245ENST00000570177 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.42
TCF4-245ENST00000570177 BRD2P25440 801 aaKnown RBP12.46□□□□□ -0.42
TCF4-245ENST00000570177 PIP4K2BP78356 416 aa12.46□□□□□ -0.42
TCF4-245ENST00000570177 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.42
TCF4-245ENST00000570177 DCAF5Q96JK2 942 aa12.46□□□□□ -0.42
TCF4-245ENST00000570177 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.42
TCF4-245ENST00000570177 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
TCF4-245ENST00000570177 HOXB7P09629 217 aa12.45□□□□□ -0.42
TCF4-245ENST00000570177 IL2RBP14784 551 aa12.45□□□□□ -0.42
TCF4-245ENST00000570177 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
TCF4-245ENST00000570177 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
TCF4-245ENST00000570177 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
TCF4-245ENST00000570177 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
TCF4-245ENST00000570177 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
TCF4-245ENST00000570177 EVA1CP58658 441 aa12.44□□□□□ -0.42
TCF4-245ENST00000570177 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
TCF4-245ENST00000570177 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
TCF4-245ENST00000570177 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
TCF4-245ENST00000570177 HDAC1Q13547 482 aaPredicted RBP12.44□□□□□ -0.42
TCF4-245ENST00000570177 PARP4Q9UKK3 1724 aaKnown RBP12.43□□□□□ -0.42
TCF4-245ENST00000570177 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
TCF4-245ENST00000570177 FLIIQ13045 1269 aa12.43□□□□□ -0.42
TCF4-245ENST00000570177 HDGFL1Q5TGJ6 251 aa12.43□□□□□ -0.42
TCF4-245ENST00000570177 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
TCF4-245ENST00000570177 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
TCF4-245ENST00000570177 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
TCF4-245ENST00000570177 F6X3S4 739 aa12.42□□□□□ -0.42
TCF4-245ENST00000570177 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
TCF4-245ENST00000570177 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
TCF4-245ENST00000570177 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
TCF4-245ENST00000570177 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
TCF4-245ENST00000570177 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
TCF4-245ENST00000570177 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
TCF4-245ENST00000570177 STK31Q9BXU1 1019 aa12.41□□□□□ -0.42
TCF4-245ENST00000570177 RWDD1Q9H446 243 aaPredicted RBP12.41□□□□□ -0.42
TCF4-245ENST00000570177 GLI3P10071 1580 aa12.41□□□□□ -0.42
TCF4-245ENST00000570177 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
TCF4-245ENST00000570177 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 PDIA6Q15084 440 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 PROSER3Q2NL68 480 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 CHPF2Q9P2E5 772 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 ANXA1P04083 346 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
TCF4-245ENST00000570177 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms