RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 KCNQ4P56696 695 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCAPER-223ENST00000569784 GPR162Q16538 588 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 MPRIPQ6WCQ1 1025 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 LRRC4BQ9NT99 713 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
SCAPER-223ENST00000569784 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
SCAPER-223ENST00000569784 KIF24Q5T7B8 1368 aa11.72□□□□□ -0.53
SCAPER-223ENST00000569784 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
SCAPER-223ENST00000569784 PTGER2P43116 358 aa11.72□□□□□ -0.53
SCAPER-223ENST00000569784 SYT17Q9BSW7 474 aa11.72□□□□□ -0.53
SCAPER-223ENST00000569784 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
SCAPER-223ENST00000569784 SRCAPQ6ZRS2 3230 aa11.72□□□□□ -0.53
SCAPER-223ENST00000569784 SHANK3Q9BYB0 1731 aa11.71□□□□□ -0.54
SCAPER-223ENST00000569784 PAPPAQ13219 1627 aa11.71□□□□□ -0.54
SCAPER-223ENST00000569784 LY75O60449 1722 aa11.7□□□□□ -0.54
SCAPER-223ENST00000569784 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
SCAPER-223ENST00000569784 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
SCAPER-223ENST00000569784 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
SCAPER-223ENST00000569784 SMARCC1Q92922 1105 aaPredicted RBP11.69□□□□□ -0.54
SCAPER-223ENST00000569784 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
SCAPER-223ENST00000569784 AK7Q96M32 723 aa11.69□□□□□ -0.54
SCAPER-223ENST00000569784 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
SCAPER-223ENST00000569784 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 ANKRD26Q9UPS8 1709 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 RGL2O15211 777 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 GABBR2O75899 941 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
SCAPER-223ENST00000569784 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
SCAPER-223ENST00000569784 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 C5P01031 1676 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
SCAPER-223ENST00000569784 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 ITGB4P16144 1822 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
SCAPER-223ENST00000569784 PHF14O94880 888 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 PANK3Q9H999 370 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 CHD4Q14839 1912 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 NSD2O96028 1365 aa11.66□□□□□ -0.54
SCAPER-223ENST00000569784 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 EYA1Q99502 592 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
SCAPER-223ENST00000569784 PKD1L3Q7Z443 1732 aa11.64□□□□□ -0.55
SCAPER-223ENST00000569784 CYP27B1O15528 508 aa11.64□□□□□ -0.55
SCAPER-223ENST00000569784 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
SCAPER-223ENST00000569784 POLKQ9UBT6 870 aa11.64□□□□□ -0.55
SCAPER-223ENST00000569784 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
SCAPER-223ENST00000569784 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
SCAPER-223ENST00000569784 TAF1LQ8IZX4 1826 aa11.63□□□□□ -0.55
SCAPER-223ENST00000569784 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
SCAPER-223ENST00000569784 ATP6V1AP38606 617 aa11.62□□□□□ -0.55
SCAPER-223ENST00000569784 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
SCAPER-223ENST00000569784 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
SCAPER-223ENST00000569784 PIGBQ92521 554 aa11.62□□□□□ -0.55
SCAPER-223ENST00000569784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.554e-7■■■□□ 18.1
SCAPER-223ENST00000569784 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
SCAPER-223ENST00000569784 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
SCAPER-223ENST00000569784 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
SCAPER-223ENST00000569784 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
SCAPER-223ENST00000569784 PHKG2P15735 406 aa11.61□□□□□ -0.55
SCAPER-223ENST00000569784 SIK1P57059 783 aa11.61□□□□□ -0.55
SCAPER-223ENST00000569784 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
SCAPER-223ENST00000569784 GNPATO15228 680 aa11.6□□□□□ -0.55
SCAPER-223ENST00000569784 CABP4P57796 275 aa11.6□□□□□ -0.55
SCAPER-223ENST00000569784 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-223ENST00000569784 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
SCAPER-223ENST00000569784 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-223ENST00000569784 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-223ENST00000569784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
SCAPER-223ENST00000569784 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
SCAPER-223ENST00000569784 NLGN2Q8NFZ4 835 aa11.59□□□□□ -0.55
SCAPER-223ENST00000569784 MTHFSP49914 203 aa11.58□□□□□ -0.56
SCAPER-223ENST00000569784 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
SCAPER-223ENST00000569784 ASAP1Q9ULH1 1129 aa11.58□□□□□ -0.56
SCAPER-223ENST00000569784 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
SCAPER-223ENST00000569784 SSFA2P28290 1259 aa11.57□□□□□ -0.56
SCAPER-223ENST00000569784 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
SCAPER-223ENST00000569784 RTCBQ9Y3I0 505 aaKnown RBP11.57□□□□□ -0.56
SCAPER-223ENST00000569784 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
SCAPER-223ENST00000569784 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
SCAPER-223ENST00000569784 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
SCAPER-223ENST00000569784 NCAPD2Q15021 1401 aa11.56□□□□□ -0.56
SCAPER-223ENST00000569784 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
SCAPER-223ENST00000569784 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
SCAPER-223ENST00000569784 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
SCAPER-223ENST00000569784 UBR3Q6ZT12 1888 aa11.55□□□□□ -0.56
SCAPER-223ENST00000569784 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
SCAPER-223ENST00000569784 RFC4P35249 363 aa11.55□□□□□ -0.56
SCAPER-223ENST00000569784 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
SCAPER-223ENST00000569784 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms