RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
LINC00556-201ENST00000569603 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
LINC00556-201ENST00000569603 EIF5BO60841 1220 aaKnown RBP9.35□□□□□ -0.91
LINC00556-201ENST00000569603 MDM2Q00987 491 aaPredicted RBP9.35□□□□□ -0.91
LINC00556-201ENST00000569603 NAIPQ13075 1403 aa9.35□□□□□ -0.91
LINC00556-201ENST00000569603 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
LINC00556-201ENST00000569603 PROSER2Q86WR7 435 aaPredicted RBP9.35□□□□□ -0.91
LINC00556-201ENST00000569603 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.35□□□□□ -0.91
LINC00556-201ENST00000569603 TRPM2O94759 1503 aa9.35□□□□□ -0.91
LINC00556-201ENST00000569603 CLTCL1P53675 1640 aa9.34□□□□□ -0.91
LINC00556-201ENST00000569603 IRF6O14896 467 aa9.34□□□□□ -0.91
LINC00556-201ENST00000569603 MMP16P51512 607 aa9.34□□□□□ -0.91
LINC00556-201ENST00000569603 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.92
LINC00556-201ENST00000569603 NEXMIFQ5QGS0 1516 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
LINC00556-201ENST00000569603 KDM4AO75164 1064 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 TRIM32Q13049 653 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 Q3C1V9 767 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC00556-201ENST00000569603 SLAIN2Q9P270 581 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 AHDC1Q5TGY3 1603 aaPredicted RBP9.33□□□□□ -0.92
LINC00556-201ENST00000569603 MSH6P52701 1360 aa9.33□□□□□ -0.92
LINC00556-201ENST00000569603 PHLPP1O60346 1717 aa9.32□□□□□ -0.92
LINC00556-201ENST00000569603 HFM1A2PYH4 1435 aa9.31□□□□□ -0.92
LINC00556-201ENST00000569603 PRAG1Q86YV5 1406 aa9.31□□□□□ -0.92
LINC00556-201ENST00000569603 AXIN1O15169 862 aa9.31□□□□□ -0.92
LINC00556-201ENST00000569603 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
LINC00556-201ENST00000569603 NUTM2DQ5VT03 806 aaPredicted RBP9.31□□□□□ -0.92
LINC00556-201ENST00000569603 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
LINC00556-201ENST00000569603 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
LINC00556-201ENST00000569603 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
LINC00556-201ENST00000569603 DCCP43146 1447 aa9.31□□□□□ -0.92
LINC00556-201ENST00000569603 EP400Q96L91 3159 aa9.3□□□□□ -0.92
LINC00556-201ENST00000569603 METP08581 1390 aa9.3□□□□□ -0.92
LINC00556-201ENST00000569603 TTC24A2A3L6 582 aaPredicted RBP9.3□□□□□ -0.92
LINC00556-201ENST00000569603 WNT7AO00755 349 aa9.3□□□□□ -0.92
LINC00556-201ENST00000569603 PPP1R15AO75807 674 aaPredicted RBP9.3□□□□□ -0.92
LINC00556-201ENST00000569603 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
LINC00556-201ENST00000569603 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
LINC00556-201ENST00000569603 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
LINC00556-201ENST00000569603 LRP6O75581 1613 aa9.3□□□□□ -0.92
LINC00556-201ENST00000569603 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 HOXA2O43364 376 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 SMPD1P17405 629 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 C19orf44Q9H6X5 657 aa9.29□□□□□ -0.92
LINC00556-201ENST00000569603 KIF1BO60333 1816 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 LAMC1P11047 1609 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 JCADQ9P266 1359 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 ITGAEP38570 1179 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 SMCPP49901 116 aaPredicted RBP9.28□□□□□ -0.92
LINC00556-201ENST00000569603 MRGPRX2Q96LB1 330 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 AMOTL2Q9Y2J4 779 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 MST1RQ04912 1400 aa9.28□□□□□ -0.92
LINC00556-201ENST00000569603 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
LINC00556-201ENST00000569603 USP46P62068 366 aa9.27□□□□□ -0.93
LINC00556-201ENST00000569603 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
LINC00556-201ENST00000569603 PPLO60437 1756 aa9.27□□□□□ -0.93
LINC00556-201ENST00000569603 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 PTCH1Q13635 1447 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 J3QL48 77 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
LINC00556-201ENST00000569603 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
LINC00556-201ENST00000569603 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
LINC00556-201ENST00000569603 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
LINC00556-201ENST00000569603 SKOR1P84550 965 aa9.25□□□□□ -0.93
LINC00556-201ENST00000569603 SNIP1Q8TAD8 396 aaKnown RBP9.25□□□□□ -0.93
LINC00556-201ENST00000569603 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
LINC00556-201ENST00000569603 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
LINC00556-201ENST00000569603 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
LINC00556-201ENST00000569603 SPATA31A6Q5VVP1 1343 aa9.24□□□□□ -0.93
LINC00556-201ENST00000569603 ROBO2Q9HCK4 1378 aa9.24□□□□□ -0.93
LINC00556-201ENST00000569603 SPATA31E1Q6ZUB1 1445 aa9.23□□□□□ -0.93
LINC00556-201ENST00000569603 IFT172Q9UG01 1749 aa9.23□□□□□ -0.93
LINC00556-201ENST00000569603 ATF3P18847 181 aa9.22□□□□□ -0.93
LINC00556-201ENST00000569603 CLCN1P35523 988 aa9.22□□□□□ -0.93
LINC00556-201ENST00000569603 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
LINC00556-201ENST00000569603 HPS1Q92902 700 aa9.22□□□□□ -0.93
LINC00556-201ENST00000569603 REPIN1Q9BWE0 567 aaKnown RBP9.22□□□□□ -0.93
LINC00556-201ENST00000569603 JUNDP17535 347 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 TMEM132AQ24JP5 1023 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
LINC00556-201ENST00000569603 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 RPGRIP1LQ68CZ1 1315 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 TECPR2O15040 1411 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.94
LINC00556-201ENST00000569603 ZNF326Q5BKZ1 582 aaKnown RBP9.2□□□□□ -0.94
LINC00556-201ENST00000569603 SNRPBP14678 240 aaKnown RBP9.19□□□□□ -0.94
LINC00556-201ENST00000569603 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
LINC00556-201ENST00000569603 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
LINC00556-201ENST00000569603 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
LINC00556-201ENST00000569603 PNPLA6Q8IY17 1366 aa9.19□□□□□ -0.94
LINC00556-201ENST00000569603 CDC42BPGQ6DT37 1551 aa9.19□□□□□ -0.94
LINC00556-201ENST00000569603 WFS1O76024 890 aa9.18□□□□□ -0.94
LINC00556-201ENST00000569603 WNT7BP56706 349 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms