RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 C2CD2LO14523 706 aa8.9□□□□□ -0.98
UBR1-209ENST00000569243 TRIM66O15016 1216 aa8.9□□□□□ -0.98
UBR1-209ENST00000569243 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.98
UBR1-209ENST00000569243 PPP2R2DQ66LE6 453 aa8.9□□□□□ -0.98
UBR1-209ENST00000569243 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
UBR1-209ENST00000569243 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
UBR1-209ENST00000569243 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
UBR1-209ENST00000569243 EPXP11678 715 aa8.88□□□□□ -0.99
UBR1-209ENST00000569243 NKAPLQ5M9Q1 402 aa8.87□□□□□ -0.99
UBR1-209ENST00000569243 POLR3EQ9NVU0 708 aa8.87□□□□□ -0.99
UBR1-209ENST00000569243 CTBSQ01459 385 aa8.86□□□□□ -0.99
UBR1-209ENST00000569243 CLN3Q13286 438 aa8.86□□□□□ -0.99
UBR1-209ENST00000569243 UBAP2LQ14157 1087 aaKnown RBP8.86□□□□□ -0.99
UBR1-209ENST00000569243 PHKA2P46019 1235 aa8.85□□□□□ -0.99
UBR1-209ENST00000569243 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
UBR1-209ENST00000569243 ABHD17AQ96GS6 310 aa8.85□□□□□ -0.99
UBR1-209ENST00000569243 FGFR3P22607 806 aa8.84□□□□□ -0.99
UBR1-209ENST00000569243 EPS8L1Q8TE68 723 aa8.84□□□□□ -0.99
UBR1-209ENST00000569243 TPSG1Q9NRR2 321 aa8.84□□□□□ -0.99
UBR1-209ENST00000569243 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
UBR1-209ENST00000569243 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
UBR1-209ENST00000569243 DYRK3O43781 588 aa8.83□□□□□ -1
UBR1-209ENST00000569243 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
UBR1-209ENST00000569243 CHSY3Q70JA7 882 aa8.83□□□□□ -1
UBR1-209ENST00000569243 RUBCNLQ9H714 662 aa8.83□□□□□ -1
UBR1-209ENST00000569243 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
UBR1-209ENST00000569243 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
UBR1-209ENST00000569243 A0A1B0GTH6 734 aa8.81□□□□□ -1
UBR1-209ENST00000569243 CSB-PGBD3P0DP91 1061 aa8.81□□□□□ -1
UBR1-209ENST00000569243 ERVK-9P63128 1117 aa8.81□□□□□ -1
UBR1-209ENST00000569243 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
UBR1-209ENST00000569243 PGBD3Q8N328 593 aa8.81□□□□□ -1
UBR1-209ENST00000569243 TRIM11Q96F44 468 aa8.81□□□□□ -1
UBR1-209ENST00000569243 PLVAPQ9BX97 442 aa8.81□□□□□ -1
UBR1-209ENST00000569243 BNIP3LO60238 219 aa8.8□□□□□ -1
UBR1-209ENST00000569243 SPATA31C1P0DKV0 1188 aa8.8□□□□□ -1
UBR1-209ENST00000569243 ARAFP10398 606 aa8.8□□□□□ -1
UBR1-209ENST00000569243 PDE4DQ08499 809 aa8.8□□□□□ -1
UBR1-209ENST00000569243 CYP2U1Q7Z449 544 aa8.8□□□□□ -1
UBR1-209ENST00000569243 LBRQ14739 615 aaKnown RBP8.79□□□□□ -1
UBR1-209ENST00000569243 EFHC2Q5JST6 749 aa8.79□□□□□ -1
UBR1-209ENST00000569243 PNMA1Q8ND90 353 aa8.79□□□□□ -1
UBR1-209ENST00000569243 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
UBR1-209ENST00000569243 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
UBR1-209ENST00000569243 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
UBR1-209ENST00000569243 SCTRP47872 440 aa8.77□□□□□ -1.01
UBR1-209ENST00000569243 MSX1P28360 303 aa8.76□□□□□ -1.01
UBR1-209ENST00000569243 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
UBR1-209ENST00000569243 AP1G2O75843 785 aa8.75□□□□□ -1.01
UBR1-209ENST00000569243 CENPCQ03188 943 aa8.75□□□□□ -1.01
UBR1-209ENST00000569243 LRP8Q14114 963 aa8.75□□□□□ -1.01
UBR1-209ENST00000569243 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
UBR1-209ENST00000569243 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
UBR1-209ENST00000569243 CNKSR1Q969H4 720 aa8.74□□□□□ -1.01
UBR1-209ENST00000569243 BCANQ96GW7 911 aa8.74□□□□□ -1.01
UBR1-209ENST00000569243 OSBPL3Q9H4L5 887 aa8.74□□□□□ -1.01
UBR1-209ENST00000569243 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
UBR1-209ENST00000569243 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
UBR1-209ENST00000569243 KLF15Q9UIH9 416 aa8.73□□□□□ -1.01
UBR1-209ENST00000569243 HYAL3O43820 417 aaPredicted RBP8.72□□□□□ -1.01
UBR1-209ENST00000569243 TRAK2O60296 914 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 APBA3O96018 575 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 IL2RAP01589 272 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 ADH6P28332 368 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 ESYT1Q9BSJ8 1104 aa8.72□□□□□ -1.01
UBR1-209ENST00000569243 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
UBR1-209ENST00000569243 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
UBR1-209ENST00000569243 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.02
UBR1-209ENST00000569243 PRRT3Q5FWE3 981 aa8.7□□□□□ -1.02
UBR1-209ENST00000569243 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
UBR1-209ENST00000569243 PCDHB11Q9Y5F2 797 aa8.7□□□□□ -1.02
UBR1-209ENST00000569243 COBLO75128 1261 aa8.69□□□□□ -1.02
UBR1-209ENST00000569243 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
UBR1-209ENST00000569243 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
UBR1-209ENST00000569243 ZCCHC2Q9C0B9 1178 aaKnown RBP8.68□□□□□ -1.02
UBR1-209ENST00000569243 CRISPLD1Q9H336 500 aa8.68□□□□□ -1.02
UBR1-209ENST00000569243 ATP1B4Q9UN42 357 aaPredicted RBP8.68□□□□□ -1.02
UBR1-209ENST00000569243 PCDHGC4Q9Y5F7 938 aa8.68□□□□□ -1.02
UBR1-209ENST00000569243 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
UBR1-209ENST00000569243 GNRH1P01148 92 aa8.67□□□□□ -1.02
UBR1-209ENST00000569243 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
UBR1-209ENST00000569243 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
UBR1-209ENST00000569243 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
UBR1-209ENST00000569243 CD33P20138 364 aa8.66□□□□□ -1.02
UBR1-209ENST00000569243 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
UBR1-209ENST00000569243 LCE1DQ5T752 114 aa8.66□□□□□ -1.02
UBR1-209ENST00000569243 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
UBR1-209ENST00000569243 FHDC1Q9C0D6 1143 aaPredicted RBP8.66□□□□□ -1.02
UBR1-209ENST00000569243 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
UBR1-209ENST00000569243 ZBBXA8MT70 800 aa8.65□□□□□ -1.02
UBR1-209ENST00000569243 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
UBR1-209ENST00000569243 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
UBR1-209ENST00000569243 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.02
UBR1-209ENST00000569243 HCN2Q9UL51 889 aa8.65□□□□□ -1.02
UBR1-209ENST00000569243 DCDC2BA2VCK2 349 aa8.64□□□□□ -1.03
UBR1-209ENST00000569243 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
UBR1-209ENST00000569243 ATXN7O15265 892 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms