RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 USP3Q9Y6I4 520 aa6.68□□□□□ -1.34
BBS4-215ENST00000569001 TMEM229AB2RXF0 380 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 SPATA31C2B4DYI2 1134 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 GAS6Q14393 721 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
BBS4-215ENST00000569001 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 GTPBP3Q969Y2 492 aaKnown RBP6.67□□□□□ -1.34
BBS4-215ENST00000569001 STK17AQ9UEE5 414 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 PCDHGA11Q9Y5H2 935 aa6.67□□□□□ -1.34
BBS4-215ENST00000569001 INHAP05111 366 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 THBS1P07996 1170 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 GTF2IP78347 998 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 PSME1Q06323 249 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 EML3Q32P44 896 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 GLMNQ92990 594 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 DYRK1BQ9Y463 629 aa6.66□□□□□ -1.34
BBS4-215ENST00000569001 PLA2G4AP47712 749 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 GNASQ5JWF2 1037 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 TRIM22Q8IYM9 498 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
BBS4-215ENST00000569001 SIRT1Q96EB6 747 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 RUBCNLQ9H714 662 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 KIAA1024Q9UPX6 916 aa6.65□□□□□ -1.34
BBS4-215ENST00000569001 USP17L3A6NCW0 530 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 USP17L4A6NCW7 530 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 USP17L2Q6R6M4 530 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 USP17L1Q7RTZ2 530 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 NOD1Q9Y239 953 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
BBS4-215ENST00000569001 F11P03951 625 aa6.63□□□□□ -1.35
BBS4-215ENST00000569001 MSX1P28360 303 aa6.63□□□□□ -1.35
BBS4-215ENST00000569001 SMTNP53814 917 aa6.63□□□□□ -1.35
BBS4-215ENST00000569001 PPARGC1BQ86YN6 1023 aaKnown RBP6.63□□□□□ -1.35
BBS4-215ENST00000569001 ZNF358Q9NW07 568 aa6.63□□□□□ -1.35
BBS4-215ENST00000569001 ATP9BO43861 1147 aa6.62□□□□□ -1.35
BBS4-215ENST00000569001 ADAMTS2O95450 1211 aa6.62□□□□□ -1.35
BBS4-215ENST00000569001 GTF2E1P29083 439 aaPredicted RBP6.62□□□□□ -1.35
BBS4-215ENST00000569001 CLDN10P78369 228 aa6.62□□□□□ -1.35
BBS4-215ENST00000569001 ZNF385CQ66K41 422 aaPredicted RBP6.62□□□□□ -1.35
BBS4-215ENST00000569001 NFATC2IPQ8NCF5 419 aa6.62□□□□□ -1.35
BBS4-215ENST00000569001 RHBDD1Q8TEB9 315 aa6.62□□□□□ -1.35
BBS4-215ENST00000569001 NUCKS1Q9H1E3 243 aaKnown RBP6.62□□□□□ -1.35
BBS4-215ENST00000569001 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
BBS4-215ENST00000569001 ZBTB7BO15156 539 aaPredicted RBP6.61□□□□□ -1.35
BBS4-215ENST00000569001 LGR5O75473 907 aa6.61□□□□□ -1.35
BBS4-215ENST00000569001 WDR44Q5JSH3 913 aa6.61□□□□□ -1.35
BBS4-215ENST00000569001 TNS4Q8IZW8 715 aa6.61□□□□□ -1.35
BBS4-215ENST00000569001 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
BBS4-215ENST00000569001 AIDAQ96BJ3 306 aa6.61□□□□□ -1.35
BBS4-215ENST00000569001 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
BBS4-215ENST00000569001 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
BBS4-215ENST00000569001 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
BBS4-215ENST00000569001 A6NJY4 79 aa6.6□□□□□ -1.35
BBS4-215ENST00000569001 ZNF295-AS1Q8N0V1 137 aa6.6□□□□□ -1.35
BBS4-215ENST00000569001 CALR3Q96L12 384 aaKnown RBP6.6□□□□□ -1.35
BBS4-215ENST00000569001 MKRN1Q9UHC7 482 aaKnown RBP6.6□□□□□ -1.35
BBS4-215ENST00000569001 IQSEC3Q9UPP2 1182 aaPredicted RBP6.6□□□□□ -1.35
BBS4-215ENST00000569001 A6NJR5 290 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 H7C1W4 665 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 ATP4AP20648 1035 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 LYPD4Q6UWN0 246 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 SVOPQ8N4V2 548 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 OGFOD1Q8N543 542 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 GAS2L2Q8NHY3 880 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 ZDHHC1Q8WTX9 485 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 SLC4A9Q96Q91 983 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 CABP1Q9NZU7 370 aa6.59□□□□□ -1.35
BBS4-215ENST00000569001 PALM3A6NDB9 673 aaPredicted RBP6.58□□□□□ -1.36
BBS4-215ENST00000569001 UBAP2LQ14157 1087 aaKnown RBP6.58□□□□□ -1.36
BBS4-215ENST00000569001 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
BBS4-215ENST00000569001 PLEKHM2Q8IWE5 1019 aa6.58□□□□□ -1.36
BBS4-215ENST00000569001 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
BBS4-215ENST00000569001 NIFKQ9BYG3 293 aaKnown RBP6.58□□□□□ -1.36
BBS4-215ENST00000569001 DNAAF2Q9NVR5 837 aaKnown RBP6.58□□□□□ -1.36
BBS4-215ENST00000569001 MAFBQ9Y5Q3 323 aaPredicted RBP6.58□□□□□ -1.36
BBS4-215ENST00000569001 IGF1RP08069 1367 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 SFI1A8K8P3 1242 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 SLURP2P0DP57 97 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 CSB-PGBD3P0DP91 1061 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 TXLNAP40222 546 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 EPHA4P54764 986 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 MTFR1Q15390 333 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 FOXR1Q6PIV2 292 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 SLC9A9Q8IVB4 645 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 PGBD3Q8N328 593 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 TSEN2Q8NCE0 465 aaKnown RBP6.57□□□□□ -1.36
BBS4-215ENST00000569001 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 TRERF1Q96PN7 1200 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 MBIPQ9NS73 344 aa6.57□□□□□ -1.36
BBS4-215ENST00000569001 SCHIP1Q9P0W5 487 aaPredicted RBP6.57□□□□□ -1.36
BBS4-215ENST00000569001 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
BBS4-215ENST00000569001 CDK2AP1O14519 115 aa6.56□□□□□ -1.36
BBS4-215ENST00000569001 LZTS3O60299 673 aaPredicted RBP6.56□□□□□ -1.36
BBS4-215ENST00000569001 SRSF11Q05519 484 aaKnown RBP6.56□□□□□ -1.36
BBS4-215ENST00000569001 TRIM50Q86XT4 487 aa6.56□□□□□ -1.36
BBS4-215ENST00000569001 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
BBS4-215ENST00000569001 HCN2Q9UL51 889 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms