RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 HSPA6P17066 643 aa7.5□□□□□ -1.21
SNX29-206ENST00000568359 RRS1Q15050 365 aaKnown RBP7.5□□□□□ -1.21
SNX29-206ENST00000568359 IGSF1Q8N6C5 1336 aa7.5□□□□□ -1.21
SNX29-206ENST00000568359 FLT4P35916 1363 aa7.49□□□□□ -1.21
SNX29-206ENST00000568359 SMARCC1Q92922 1105 aaPredicted RBP7.49□□□□□ -1.21
SNX29-206ENST00000568359 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
SNX29-206ENST00000568359 ADCY9O60503 1353 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 CEP350Q5VT06 3117 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 FBLN1P23142 703 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX29-206ENST00000568359 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 GGNBP2Q9H3C7 697 aa7.48□□□□□ -1.21
SNX29-206ENST00000568359 INSRP06213 1382 aa7.47□□□□□ -1.21
SNX29-206ENST00000568359 N4BP2Q86UW6 1770 aaPredicted RBP7.47□□□□□ -1.21
SNX29-206ENST00000568359 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
SNX29-206ENST00000568359 PPM1GO15355 546 aaPredicted RBP7.47□□□□□ -1.21
SNX29-206ENST00000568359 NEUROD2Q15784 382 aa7.47□□□□□ -1.21
SNX29-206ENST00000568359 HS6ST3Q8IZP7 471 aa7.47□□□□□ -1.21
SNX29-206ENST00000568359 ZMYND15Q9H091 742 aa7.47□□□□□ -1.21
SNX29-206ENST00000568359 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
SNX29-206ENST00000568359 CICQ96RK0 1608 aaPredicted RBP7.47□□□□□ -1.21
SNX29-206ENST00000568359 ST20-MTHFSA0A0A6YYL1 179 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 GNPATO15228 680 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 SSFA2P28290 1259 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 TMF1P82094 1093 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 TMOD3Q9NYL9 352 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 ZNF219Q9P2Y4 722 aaPredicted RBP7.46□□□□□ -1.22
SNX29-206ENST00000568359 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 ANKRD26Q9UPS8 1709 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.22
SNX29-206ENST00000568359 KIF13BQ9NQT8 1826 aa7.45□□□□□ -1.22
SNX29-206ENST00000568359 WDR90Q96KV7 1748 aa7.45□□□□□ -1.22
SNX29-206ENST00000568359 APLP1P51693 650 aa7.45□□□□□ -1.22
SNX29-206ENST00000568359 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
SNX29-206ENST00000568359 HSP90AB2PQ58FF8 381 aa7.45□□□□□ -1.22
SNX29-206ENST00000568359 C16orf71Q8IYS4 520 aaPredicted RBP7.45□□□□□ -1.22
SNX29-206ENST00000568359 ARID3AQ99856 593 aa7.45□□□□□ -1.22
SNX29-206ENST00000568359 MAP2P11137 1827 aaKnown RBP7.45□□□□□ -1.22
SNX29-206ENST00000568359 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 FYB1O15117 783 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 CYP27B1O15528 508 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 ATP6V1AP38606 617 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 SIK1P57059 783 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 SMIM5Q71RC9 77 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 PIGBQ92521 554 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 TESK2Q96S53 571 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 C4AP0C0L4 1744 aa7.44□□□□□ -1.22
SNX29-206ENST00000568359 PXDNLA1KZ92 1463 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 MMP10P09238 476 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 LINC00116Q8NCU8 138 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 EMILIN1Q9Y6C2 1016 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 COL5A3P25940 1745 aaPredicted RBP7.43□□□□□ -1.22
SNX29-206ENST00000568359 KIAA1551Q9HCM1 1747 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 ARFGEF1Q9Y6D6 1849 aa7.43□□□□□ -1.22
SNX29-206ENST00000568359 BRCA1P38398 1863 aaKnown RBP7.43□□□□□ -1.22
SNX29-206ENST00000568359 TNRC6CQ9HCJ0 1690 aaKnown RBP7.42□□□□□ -1.22
SNX29-206ENST00000568359 KIF3CO14782 793 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 TOMM70O94826 608 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 SAMD1Q6SPF0 538 aaPredicted RBP7.42□□□□□ -1.22
SNX29-206ENST00000568359 ARHGAP27Q6ZUM4 889 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 AMIGO3Q86WK7 504 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 NECTIN2Q92692 538 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 RBM42Q9BTD8 480 aaKnown RBP7.42□□□□□ -1.22
SNX29-206ENST00000568359 CCDC87Q9NVE4 849 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 RTCBQ9Y3I0 505 aaKnown RBP7.42□□□□□ -1.22
SNX29-206ENST00000568359 PARP3Q9Y6F1 533 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 PLEKHG2Q9H7P9 1386 aa7.42□□□□□ -1.22
SNX29-206ENST00000568359 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 GTPBP6O43824 516 aaPredicted RBP7.41□□□□□ -1.22
SNX29-206ENST00000568359 FCHSD2O94868 740 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 RFC4P35249 363 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 TGFB2P61812 414 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 TRAPPC3LQ5T215 181 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 ASAP1Q9ULH1 1129 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 C10orf71Q711Q0 1435 aa7.41□□□□□ -1.22
SNX29-206ENST00000568359 A0A0G2JLW4 131 aa7.4□□□□□ -1.22
SNX29-206ENST00000568359 ITPK1Q13572 414 aa7.4□□□□□ -1.22
SNX29-206ENST00000568359 NLGN1Q8N2Q7 840 aa7.4□□□□□ -1.22
SNX29-206ENST00000568359 NCAPD2Q15021 1401 aa7.4□□□□□ -1.22
SNX29-206ENST00000568359 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
SNX29-206ENST00000568359 HSP90AB1P08238 724 aaKnown RBP7.39□□□□□ -1.23
SNX29-206ENST00000568359 PHKG2P15735 406 aa7.39□□□□□ -1.23
SNX29-206ENST00000568359 POLR3GLQ9BT43 218 aa7.39□□□□□ -1.23
SNX29-206ENST00000568359 NMRK2Q9NPI5 230 aa7.39□□□□□ -1.23
SNX29-206ENST00000568359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNX29-206ENST00000568359 KCPQ6ZWJ8 1503 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 KDRP35968 1356 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 WASHC2AQ641Q2 1341 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 CAPN15O75808 1086 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 DPEP1P16444 411 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 TNNT2P45379 298 aaPredicted RBP7.38□□□□□ -1.23
SNX29-206ENST00000568359 C9orf131Q5VYM1 1079 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 RBM46Q8TBY0 533 aaKnown RBP7.38□□□□□ -1.23
SNX29-206ENST00000568359 EYA1Q99502 592 aa7.38□□□□□ -1.23
SNX29-206ENST00000568359 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms