RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 USP17L5A8MUK1 530 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 KRT76Q01546 638 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 TLR1Q15399 786 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 CNTNAP3BQ96NU0 1288 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 CNTNAP3Q9BZ76 1288 aa14.24□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 TRIM22Q8IYM9 498 aa14.23□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 PCDHGA11Q9Y5H2 935 aa14.23□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 A6NJR5 290 aa14.22□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 PHKA2P46019 1235 aa14.22□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 UCN2Q96RP3 112 aa14.22□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 H7C1W4 665 aa14.21□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
DNAAF4-CCPG1-202ENST00000568310 F11P03951 625 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 GTF2IP78347 998 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 DBN1Q16643 649 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 RNFT1Q5M7Z0 435 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 RHBDD1Q8TEB9 315 aa14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 ZNF837Q96EG3 531 aaPredicted RBP14.2□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 FAM181BA6NEQ2 426 aa14.19□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 TMEM229AB2RXF0 380 aa14.19□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 GLMNQ92990 594 aa14.19□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 SERTAD1Q9UHV2 236 aa14.19□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 SMTNP53814 917 aa14.18□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 A0A1B0GTH6 734 aa14.17□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 ATP9BO43861 1147 aa14.17□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 PLEKHM2Q8IWE5 1019 aa14.17□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 PSME1Q06323 249 aa14.16□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 FOXR1Q6PIV2 292 aa14.16□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 USP17L3A6NCW0 530 aa14.15□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 USP17L4A6NCW7 530 aa14.15□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 USP17L1Q7RTZ2 530 aa14.15□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 GPAMQ9HCL2 828 aa14.15□□□□□ -0.14
DNAAF4-CCPG1-202ENST00000568310 TRIM50Q86XT4 487 aa14.14□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 GTPBP3Q969Y2 492 aaKnown RBP14.13□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 NUCKS1Q9H1E3 243 aaKnown RBP14.13□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 A6NJY4 79 aa14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 GPR25O00155 361 aa14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 BACH1O14867 736 aa14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 GAS6Q14393 721 aa14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 MTFR1Q15390 333 aa14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 CALR3Q96L12 384 aaKnown RBP14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 NIFKQ9BYG3 293 aaKnown RBP14.12□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.11□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 CDK2AP1O14519 115 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 MSX1P28360 303 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 PLA2G4AP47712 749 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 ATP1A2P50993 1020 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 TRERF1Q96PN7 1200 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 ZNF358Q9NW07 568 aa14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 TFIP11Q9UBB9 837 aaKnown RBP14.1□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 SLURP2P0DP57 97 aa14.09□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 PGBD3Q8N328 593 aa14.09□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 NACADO15069 1562 aa14.09□□□□□ -0.15
DNAAF4-CCPG1-202ENST00000568310 IQSEC3Q9UPP2 1182 aaPredicted RBP14.08□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 CLDN10P78369 228 aa14.07□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 SRSF11Q05519 484 aaKnown RBP14.07□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 RUBCNLQ9H714 662 aa14.07□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 THBS1P07996 1170 aa14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 LBRQ14739 615 aaKnown RBP14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 ZNF295-AS1Q8N0V1 137 aa14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 OGFOD1Q8N543 542 aa14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 TPCN2Q8NHX9 752 aa14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 DNAAF2Q9NVR5 837 aaKnown RBP14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 KIAA1024Q9UPX6 916 aa14.06□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 CCDC102BQ68D86 513 aa14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 AIDAQ96BJ3 306 aa14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 MAFBQ9Y5Q3 323 aaPredicted RBP14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 USP3Q9Y6I4 520 aa14.05□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 EFHC2Q5JST6 749 aa14.04□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 LARGE2Q8N3Y3 721 aa14.04□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 CABP1Q9NZU7 370 aa14.04□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 SCHIP1Q9P0W5 487 aaPredicted RBP14.04□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 C1orf216Q8TAB5 229 aa14.03□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 PPP1R12CQ9BZL4 782 aa14.03□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 CRISPLD1Q9H336 500 aa14.03□□□□□ -0.16
DNAAF4-CCPG1-202ENST00000568310 ZNF385CQ66K41 422 aaPredicted RBP14.02□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 SVOPQ8N4V2 548 aa14.02□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 EPHA4P54764 986 aa14.01□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 ZNF777Q9ULD5 760 aaPredicted RBP14.01□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 MX2P20592 715 aa14□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 ATP4AP20648 1035 aa14□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 UBAP2LQ14157 1087 aaKnown RBP14□□□□□ -0.17
DNAAF4-CCPG1-202ENST00000568310 TNS4Q8IZW8 715 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms