RNA–Protein interactions for RNA: ENST00000567949.5

CTU2-210, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-210ENST00000567949 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
CTU2-210ENST00000567949 SPG7Q9UQ90 795 aa25.85■■□□□ 1.73
CTU2-210ENST00000567949 HOXB7P09629 217 aa25.84■■□□□ 1.73
CTU2-210ENST00000567949 CACNA1FO60840 1977 aa25.83■■□□□ 1.73
CTU2-210ENST00000567949 SIPA1L3O60292 1781 aaPredicted RBP25.82■■□□□ 1.72
CTU2-210ENST00000567949 C1orf115Q9H7X2 142 aa25.82■■□□□ 1.72
CTU2-210ENST00000567949 KCNQ3O43525 872 aa25.81■■□□□ 1.72
CTU2-210ENST00000567949 C8orf34Q49A92 452 aa25.81■■□□□ 1.72
CTU2-210ENST00000567949 HDGFL1Q5TGJ6 251 aa25.81■■□□□ 1.72
CTU2-210ENST00000567949 CHMP4AQ9BY43 222 aa25.81■■□□□ 1.72
CTU2-210ENST00000567949 WDR17Q8IZU2 1322 aa25.81■■□□□ 1.72
CTU2-210ENST00000567949 PHKG2P15735 406 aa25.8■■□□□ 1.72
CTU2-210ENST00000567949 FLIIQ13045 1269 aa25.8■■□□□ 1.72
CTU2-210ENST00000567949 NECTIN2Q92692 538 aa25.8■■□□□ 1.72
CTU2-210ENST00000567949 PKD1L3Q7Z443 1732 aa25.79■■□□□ 1.72
CTU2-210ENST00000567949 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
CTU2-210ENST00000567949 CCT4P50991 539 aaKnown RBP25.78■■□□□ 1.72
CTU2-210ENST00000567949 IFNL2Q8IZJ0 200 aa25.78■■□□□ 1.72
CTU2-210ENST00000567949 SCN11AQ9UI33 1791 aa25.78■■□□□ 1.72
CTU2-210ENST00000567949 KDM6AO15550 1401 aaPredicted RBP25.77■■□□□ 1.72
CTU2-210ENST00000567949 SIRT2Q8IXJ6 389 aa25.77■■□□□ 1.72
CTU2-210ENST00000567949 F6X3S4 739 aa25.76■■□□□ 1.72
CTU2-210ENST00000567949 GCC1Q96CN9 775 aa25.76■■□□□ 1.72
CTU2-210ENST00000567949 ANP32AP39687 249 aaKnown RBP25.76■■□□□ 1.71
CTU2-210ENST00000567949 FKBP5Q13451 457 aaPredicted RBP25.76■■□□□ 1.71
CTU2-210ENST00000567949 LTBP4Q8N2S1 1624 aa25.76■■□□□ 1.71
CTU2-210ENST00000567949 HEG1Q9ULI3 1381 aa25.75■■□□□ 1.71
CTU2-210ENST00000567949 NUCB1Q02818 461 aa25.75■■□□□ 1.71
CTU2-210ENST00000567949 SLC4A10Q6U841 1118 aa25.75■■□□□ 1.71
CTU2-210ENST00000567949 TOM1L2Q6ZVM7 507 aa25.75■■□□□ 1.71
CTU2-210ENST00000567949 EIF2S2P20042 333 aaKnown RBP25.74■■□□□ 1.71
CTU2-210ENST00000567949 SLC52A2Q9HAB3 445 aa25.74■■□□□ 1.71
CTU2-210ENST00000567949 ROBO1Q9Y6N7 1651 aa25.74■■□□□ 1.71
CTU2-210ENST00000567949 PARP4Q9UKK3 1724 aaKnown RBP25.73■■□□□ 1.71
CTU2-210ENST00000567949 CYP27B1O15528 508 aa25.73■■□□□ 1.71
CTU2-210ENST00000567949 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
CTU2-210ENST00000567949 MEIS3Q99687 375 aa25.73■■□□□ 1.71
CTU2-210ENST00000567949 GIGYF1O75420 1035 aaPredicted RBP25.72■■□□□ 1.71
CTU2-210ENST00000567949 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
CTU2-210ENST00000567949 AHDC1Q5TGY3 1603 aaPredicted RBP25.71■■□□□ 1.71
CTU2-210ENST00000567949 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
CTU2-210ENST00000567949 PXDNLA1KZ92 1463 aa25.71■■□□□ 1.71
CTU2-210ENST00000567949 RPAP2Q8IXW5 612 aaPredicted RBP25.71■■□□□ 1.71
CTU2-210ENST00000567949 CARD10Q9BWT7 1032 aa25.71■■□□□ 1.71
CTU2-210ENST00000567949 MRC1P22897 1456 aa25.71■■□□□ 1.71
CTU2-210ENST00000567949 ANKRD44Q8N8A2 993 aa25.71■■□□□ 1.71
CTU2-210ENST00000567949 N4BP2Q86UW6 1770 aaPredicted RBP25.7■■□□□ 1.7
CTU2-210ENST00000567949 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
CTU2-210ENST00000567949 CHPF2Q9P2E5 772 aa25.7■■□□□ 1.7
CTU2-210ENST00000567949 CHD1LQ86WJ1 897 aa25.69■■□□□ 1.7
CTU2-210ENST00000567949 MSH5O43196 834 aa25.68■■□□□ 1.7
CTU2-210ENST00000567949 CEP85Q6P2H3 762 aa25.68■■□□□ 1.7
CTU2-210ENST00000567949 NFATC2IPQ8NCF5 419 aa25.68■■□□□ 1.7
CTU2-210ENST00000567949 EVA1CP58658 441 aa25.67■■□□□ 1.7
CTU2-210ENST00000567949 ZNF790Q6PG37 636 aa25.67■■□□□ 1.7
CTU2-210ENST00000567949 NPM2Q86SE8 214 aaKnown RBP25.67■■□□□ 1.7
CTU2-210ENST00000567949 DBF4Q9UBU7 674 aaPredicted RBP25.67■■□□□ 1.7
CTU2-210ENST00000567949 LARP1Q6PKG0 1096 aaKnown RBP25.66■■□□□ 1.7
CTU2-210ENST00000567949 ZCRB1Q8TBF4 217 aaKnown RBP25.66■■□□□ 1.7
CTU2-210ENST00000567949 STRN4Q9NRL3 753 aa25.66■■□□□ 1.7
CTU2-210ENST00000567949 PCDH11XQ9BZA7 1347 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 PCDH11YQ9BZA8 1340 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 ANKRD45Q5TZF3 282 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 LNPKQ9C0E8 428 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 DCTPP1Q9H773 170 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 IL2RBP14784 551 aa25.65■■□□□ 1.7
CTU2-210ENST00000567949 COL22A1Q8NFW1 1626 aaPredicted RBP25.64■■□□□ 1.7
CTU2-210ENST00000567949 SLC39A6Q13433 755 aa25.64■■□□□ 1.69
CTU2-210ENST00000567949 IPO9Q96P70 1041 aaKnown RBP25.64■■□□□ 1.69
CTU2-210ENST00000567949 GNAI3P08754 354 aa25.63■■□□□ 1.69
CTU2-210ENST00000567949 PRAMEF22A3QJZ6 481 aa25.62■■□□□ 1.69
CTU2-210ENST00000567949 GNAI2P04899 355 aa25.62■■□□□ 1.69
CTU2-210ENST00000567949 CABP4P57796 275 aa25.61■■□□□ 1.69
CTU2-210ENST00000567949 COL14A1Q05707 1796 aaKnown RBP25.6■■□□□ 1.69
CTU2-210ENST00000567949 ANXA1P04083 346 aa25.6■■□□□ 1.69
CTU2-210ENST00000567949 HMMRO75330 724 aa25.59■■□□□ 1.69
CTU2-210ENST00000567949 NKX1-1Q15270 411 aaPredicted RBP25.59■■□□□ 1.69
CTU2-210ENST00000567949 DNAAF4Q8WXU2 420 aa25.59■■□□□ 1.69
CTU2-210ENST00000567949 HYPKQ9NX55 129 aa25.59■■□□□ 1.69
CTU2-210ENST00000567949 BTG4Q9NY30 223 aa25.59■■□□□ 1.69
CTU2-210ENST00000567949 PI4KAP2A4QPH2 592 aa25.58■■□□□ 1.69
CTU2-210ENST00000567949 TTC5Q8N0Z6 440 aa25.58■■□□□ 1.69
CTU2-210ENST00000567949 PI4KAP1Q8N8J0 262 aa25.58■■□□□ 1.69
CTU2-210ENST00000567949 SRCIN1Q9C0H9 1055 aa25.58■■□□□ 1.69
CTU2-210ENST00000567949 C5P01031 1676 aa25.58■■□□□ 1.68
CTU2-210ENST00000567949 PROSER3Q2NL68 480 aa25.57■■□□□ 1.68
CTU2-210ENST00000567949 ZNF496Q96IT1 587 aaPredicted RBP25.57■■□□□ 1.68
CTU2-210ENST00000567949 USP44Q9H0E7 712 aa25.57■■□□□ 1.68
CTU2-210ENST00000567949 DDX21Q9NR30 783 aaKnown RBP eCLIP25.57■■□□□ 1.68
CTU2-210ENST00000567949 SHANK3Q9BYB0 1731 aa25.57■■□□□ 1.68
CTU2-210ENST00000567949 ADCY9O60503 1353 aa25.57■■□□□ 1.68
CTU2-210ENST00000567949 BEND3Q5T5X7 828 aa25.56■■□□□ 1.68
CTU2-210ENST00000567949 ERVV-2B6SEH9 535 aa25.55■■□□□ 1.68
CTU2-210ENST00000567949 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
CTU2-210ENST00000567949 FMNL2Q96PY5 1086 aa25.55■■□□□ 1.68
CTU2-210ENST00000567949 SNRPA1P09661 255 aaKnown RBP25.54■■□□□ 1.68
CTU2-210ENST00000567949 PDIA6Q15084 440 aa25.54■■□□□ 1.68
CTU2-210ENST00000567949 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
CTU2-210ENST00000567949 SEC24BO95487 1268 aa25.53■■□□□ 1.68
CTU2-210ENST00000567949 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms