RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 HMOX1P09601 288 aa10.22□□□□□ -0.77
GINS3-207ENST00000567400 CNGB1Q14028 1251 aaPredicted RBP10.22□□□□□ -0.77
GINS3-207ENST00000567400 ARXQ96QS3 562 aa10.22□□□□□ -0.77
GINS3-207ENST00000567400 SYT17Q9BSW7 474 aa10.22□□□□□ -0.77
GINS3-207ENST00000567400 MRC1P22897 1456 aa10.22□□□□□ -0.77
GINS3-207ENST00000567400 ERVV-2B6SEH9 535 aa10.21□□□□□ -0.77
GINS3-207ENST00000567400 CICQ96RK0 1608 aaPredicted RBP10.21□□□□□ -0.78
GINS3-207ENST00000567400 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
GINS3-207ENST00000567400 DIAPH1O60610 1272 aaKnown RBP10.2□□□□□ -0.78
GINS3-207ENST00000567400 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
GINS3-207ENST00000567400 TJP1Q07157 1748 aa10.2□□□□□ -0.78
GINS3-207ENST00000567400 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
GINS3-207ENST00000567400 MYH14Q7Z406 1995 aaKnown RBP10.19□□□□□ -0.78
GINS3-207ENST00000567400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.18□□□□□ -0.78
GINS3-207ENST00000567400 PHF14O94880 888 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 CABP4P57796 275 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
GINS3-207ENST00000567400 C1orf141Q5JVX7 400 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 NFATC2IPQ8NCF5 419 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 AK7Q96M32 723 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 LGR6Q9HBX8 967 aa10.18□□□□□ -0.78
GINS3-207ENST00000567400 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 GNPATO15228 680 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 MSH5O43196 834 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 SSFA2P28290 1259 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 POLD1P28340 1107 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 AKAP4Q5JQC9 854 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 NLGN2Q8NFZ4 835 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 KCPQ6ZWJ8 1503 aa10.17□□□□□ -0.78
GINS3-207ENST00000567400 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
GINS3-207ENST00000567400 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
GINS3-207ENST00000567400 RNMTO43148 476 aaKnown RBP10.16□□□□□ -0.78
GINS3-207ENST00000567400 PTCD1O75127 700 aaKnown RBP10.16□□□□□ -0.78
GINS3-207ENST00000567400 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
GINS3-207ENST00000567400 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
GINS3-207ENST00000567400 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
GINS3-207ENST00000567400 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
GINS3-207ENST00000567400 SIPA1L3O60292 1781 aaPredicted RBP10.16□□□□□ -0.78
GINS3-207ENST00000567400 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
GINS3-207ENST00000567400 HMGB2P26583 209 aaKnown RBP10.14□□□□□ -0.79
GINS3-207ENST00000567400 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
GINS3-207ENST00000567400 PHACTR3Q96KR7 559 aa10.14□□□□□ -0.79
GINS3-207ENST00000567400 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
GINS3-207ENST00000567400 YY1P25490 414 aa10.13□□□□□ -0.79
GINS3-207ENST00000567400 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
GINS3-207ENST00000567400 SLC39A6Q13433 755 aa10.13□□□□□ -0.79
GINS3-207ENST00000567400 RC3H1Q5TC82 1133 aaKnown RBP10.13□□□□□ -0.79
GINS3-207ENST00000567400 IL17REQ8NFR9 667 aa10.13□□□□□ -0.79
GINS3-207ENST00000567400 KIAA1551Q9HCM1 1747 aa10.13□□□□□ -0.79
GINS3-207ENST00000567400 CEMIPQ8WUJ3 1361 aa10.13□□□□□ -0.79
GINS3-207ENST00000567400 PRKAR2BP31323 418 aa10.12□□□□□ -0.79
GINS3-207ENST00000567400 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
GINS3-207ENST00000567400 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
GINS3-207ENST00000567400 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
GINS3-207ENST00000567400 RPS6KA4O75676 772 aa10.11□□□□□ -0.79
GINS3-207ENST00000567400 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
GINS3-207ENST00000567400 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
GINS3-207ENST00000567400 DNAJC10Q8IXB1 793 aa10.11□□□□□ -0.79
GINS3-207ENST00000567400 CFAP53Q96M91 514 aa10.11□□□□□ -0.79
GINS3-207ENST00000567400 CHD4Q14839 1912 aa10.11□□□□□ -0.79
GINS3-207ENST00000567400 MMP10P09238 476 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 CYP19A1P11511 503 aaPredicted RBP10.1□□□□□ -0.79
GINS3-207ENST00000567400 GYS1P13807 737 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 ADRA2BP18089 450 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 GAS2L2Q8NHY3 880 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 CD2APQ9Y5K6 639 aa10.1□□□□□ -0.79
GINS3-207ENST00000567400 C10orf71Q711Q0 1435 aa10.09□□□□□ -0.79
GINS3-207ENST00000567400 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
GINS3-207ENST00000567400 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
GINS3-207ENST00000567400 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
GINS3-207ENST00000567400 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
GINS3-207ENST00000567400 SRP68Q9UHB9 627 aaKnown RBP10.09□□□□□ -0.79
GINS3-207ENST00000567400 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
GINS3-207ENST00000567400 USP42Q9H9J4 1324 aaKnown RBP10.08□□□□□ -0.8
GINS3-207ENST00000567400 FCHSD2O94868 740 aa10.08□□□□□ -0.8
GINS3-207ENST00000567400 GPR162Q16538 588 aa10.08□□□□□ -0.8
GINS3-207ENST00000567400 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
GINS3-207ENST00000567400 CCDC87Q9NVE4 849 aa10.08□□□□□ -0.8
GINS3-207ENST00000567400 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
GINS3-207ENST00000567400 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
GINS3-207ENST00000567400 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
GINS3-207ENST00000567400 KCNQ3O43525 872 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 RFC4P35249 363 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 FKBP8Q14318 412 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
GINS3-207ENST00000567400 BRCA1P38398 1863 aaKnown RBP10.06□□□□□ -0.8
GINS3-207ENST00000567400 COL15A1P39059 1388 aa10.06□□□□□ -0.8
GINS3-207ENST00000567400 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
GINS3-207ENST00000567400 DDR1Q08345 913 aa10.06□□□□□ -0.8
GINS3-207ENST00000567400 TEFQ10587 303 aa10.06□□□□□ -0.8
GINS3-207ENST00000567400 MCM10Q7L590 875 aa10.06□□□□□ -0.8
GINS3-207ENST00000567400 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
GINS3-207ENST00000567400 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms