RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 NSFL1CQ9UNZ2 370 aaKnown RBP7.72□□□□□ -1.17
CDH1-211ENST00000567320 IGF1RP08069 1367 aa7.71□□□□□ -1.17
CDH1-211ENST00000567320 CELA2BP08218 269 aaPredicted RBP7.71□□□□□ -1.18
CDH1-211ENST00000567320 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
CDH1-211ENST00000567320 MX2P20592 715 aa7.71□□□□□ -1.18
CDH1-211ENST00000567320 WASHC4Q2M389 1173 aa7.71□□□□□ -1.18
CDH1-211ENST00000567320 PGBD3Q8N328 593 aa7.71□□□□□ -1.18
CDH1-211ENST00000567320 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
CDH1-211ENST00000567320 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
CDH1-211ENST00000567320 STAU1O95793 577 aaKnown RBP7.7□□□□□ -1.18
CDH1-211ENST00000567320 NEDD1Q8NHV4 660 aa7.7□□□□□ -1.18
CDH1-211ENST00000567320 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
CDH1-211ENST00000567320 A0A1B0GTH6 734 aa7.69□□□□□ -1.18
CDH1-211ENST00000567320 TLR1Q15399 786 aa7.69□□□□□ -1.18
CDH1-211ENST00000567320 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
CDH1-211ENST00000567320 ETNK1Q9HBU6 452 aa7.69□□□□□ -1.18
CDH1-211ENST00000567320 C4orf17Q53FE4 359 aa7.68□□□□□ -1.18
CDH1-211ENST00000567320 RUBCNLQ9H714 662 aa7.68□□□□□ -1.18
CDH1-211ENST00000567320 BCRP11274 1271 aa7.67□□□□□ -1.18
CDH1-211ENST00000567320 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
CDH1-211ENST00000567320 PHF24Q9UPV7 400 aa7.67□□□□□ -1.18
CDH1-211ENST00000567320 MSX1P28360 303 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 GSK3AP49840 483 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 MCM6Q14566 821 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 MAP7D1Q3KQU3 841 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 EFHC2Q5JST6 749 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 RHBDD1Q8TEB9 315 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 AIDAQ96BJ3 306 aa7.66□□□□□ -1.18
CDH1-211ENST00000567320 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
CDH1-211ENST00000567320 SOX11P35716 441 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 PLA2G4AP47712 749 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 GDF10P55107 478 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 KANK3Q6NY19 840 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 ACDQ96AP0 544 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 SERTAD1Q9UHV2 236 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.18
CDH1-211ENST00000567320 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
CDH1-211ENST00000567320 TBC1D9Q6ZT07 1266 aa7.64□□□□□ -1.19
CDH1-211ENST00000567320 PPARGC1BQ86YN6 1023 aaKnown RBP7.64□□□□□ -1.19
CDH1-211ENST00000567320 CFHR5Q9BXR6 569 aa7.64□□□□□ -1.19
CDH1-211ENST00000567320 CNTNAP5Q8WYK1 1306 aa7.63□□□□□ -1.19
CDH1-211ENST00000567320 PHF20L1A8MW92 1017 aa7.63□□□□□ -1.19
CDH1-211ENST00000567320 INHAP05111 366 aa7.63□□□□□ -1.19
CDH1-211ENST00000567320 MAP2K3P46734 347 aa7.63□□□□□ -1.19
CDH1-211ENST00000567320 BEND7Q8N7W2 519 aaPredicted RBP7.63□□□□□ -1.19
CDH1-211ENST00000567320 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
CDH1-211ENST00000567320 RAD21O60216 631 aa7.62□□□□□ -1.19
CDH1-211ENST00000567320 SKIP12755 728 aa7.62□□□□□ -1.19
CDH1-211ENST00000567320 PSME1Q06323 249 aa7.62□□□□□ -1.19
CDH1-211ENST00000567320 NIFKQ9BYG3 293 aaKnown RBP7.62□□□□□ -1.19
CDH1-211ENST00000567320 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
CDH1-211ENST00000567320 BMP4P12644 408 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 SCNN1DP51172 638 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 SMTNP53814 917 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
CDH1-211ENST00000567320 ARSJQ5FYB0 599 aaPredicted RBP7.61□□□□□ -1.19
CDH1-211ENST00000567320 ABHD17AQ96GS6 310 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 RRAGCQ9HB90 399 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 CHIC2Q9UKJ5 165 aa7.61□□□□□ -1.19
CDH1-211ENST00000567320 DNMT3AQ9Y6K1 912 aaPredicted RBP7.61□□□□□ -1.19
CDH1-211ENST00000567320 PIK3CDO00329 1044 aa7.6□□□□□ -1.19
CDH1-211ENST00000567320 THBS1P07996 1170 aa7.6□□□□□ -1.19
CDH1-211ENST00000567320 EML3Q32P44 896 aa7.6□□□□□ -1.19
CDH1-211ENST00000567320 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
CDH1-211ENST00000567320 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
CDH1-211ENST00000567320 AMPD1P23109 780 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 NBPF1Q3BBV0 1214 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 KLRG1Q96E93 195 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 CABP1Q9NZU7 370 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 NOD1Q9Y239 953 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 GJA3Q9Y6H8 435 aa7.59□□□□□ -1.19
CDH1-211ENST00000567320 OIP5O43482 229 aa7.58□□□□□ -1.2
CDH1-211ENST00000567320 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
CDH1-211ENST00000567320 FGFR3P22607 806 aa7.58□□□□□ -1.2
CDH1-211ENST00000567320 FIGNL1Q6PIW4 674 aa7.58□□□□□ -1.2
CDH1-211ENST00000567320 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
CDH1-211ENST00000567320 TATP17735 454 aaPredicted RBP7.57□□□□□ -1.2
CDH1-211ENST00000567320 LRRC4BQ9NT99 713 aa7.57□□□□□ -1.2
CDH1-211ENST00000567320 GDF2Q9UK05 429 aaPredicted RBP7.57□□□□□ -1.2
CDH1-211ENST00000567320 A6NJY4 79 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 TMEM229AB2RXF0 380 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 BACH1O14867 736 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 BNIP3LO60238 219 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 GTF2IP78347 998 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 FOXK2Q01167 660 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 CTBSQ01459 385 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 BICDL1Q6ZP65 573 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 C1orf216Q8TAB5 229 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 ZCCHC2Q9C0B9 1178 aaKnown RBP7.56□□□□□ -1.2
CDH1-211ENST00000567320 CRISPLD1Q9H336 500 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 PCDHGC4Q9Y5F7 938 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
CDH1-211ENST00000567320 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 ATXN7O15265 892 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms