RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
VAC14-208ENST00000566655 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 SLC52A2Q9HAB3 445 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 PLCH1Q4KWH8 1693 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 HEG1Q9ULI3 1381 aa20.28■□□□□ 0.84
VAC14-208ENST00000566655 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
VAC14-208ENST00000566655 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
VAC14-208ENST00000566655 FBXO41Q8TF61 875 aa20.28■□□□□ 0.84
VAC14-208ENST00000566655 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
VAC14-208ENST00000566655 HSPA1LP34931 641 aa20.27■□□□□ 0.84
VAC14-208ENST00000566655 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
VAC14-208ENST00000566655 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
VAC14-208ENST00000566655 SPATA31A1Q5TZJ5 1347 aa20.26■□□□□ 0.83
VAC14-208ENST00000566655 LRP6O75581 1613 aa20.26■□□□□ 0.83
VAC14-208ENST00000566655 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
VAC14-208ENST00000566655 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
VAC14-208ENST00000566655 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
VAC14-208ENST00000566655 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
VAC14-208ENST00000566655 IPO8O15397 1037 aaKnown RBP20.25■□□□□ 0.83
VAC14-208ENST00000566655 HOXB7P09629 217 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 MS4A1P11836 297 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
VAC14-208ENST00000566655 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
VAC14-208ENST00000566655 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
VAC14-208ENST00000566655 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
VAC14-208ENST00000566655 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
VAC14-208ENST00000566655 MVPQ14764 893 aaKnown RBP20.22■□□□□ 0.83
VAC14-208ENST00000566655 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
VAC14-208ENST00000566655 RGS12O14924 1447 aa20.22■□□□□ 0.83
VAC14-208ENST00000566655 NWD2Q9ULI1 1742 aa20.22■□□□□ 0.83
VAC14-208ENST00000566655 ERVV-2B6SEH9 535 aa20.21■□□□□ 0.83
VAC14-208ENST00000566655 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
VAC14-208ENST00000566655 ABCC4O15439 1325 aa20.21■□□□□ 0.83
VAC14-208ENST00000566655 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
VAC14-208ENST00000566655 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
VAC14-208ENST00000566655 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
VAC14-208ENST00000566655 DDX54Q8TDD1 881 aaKnown RBP20.21■□□□□ 0.83
VAC14-208ENST00000566655 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
VAC14-208ENST00000566655 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.82
VAC14-208ENST00000566655 G2E3Q7L622 706 aa20.2■□□□□ 0.82
VAC14-208ENST00000566655 FTSJ3Q8IY81 847 aaKnown RBP20.2■□□□□ 0.82
VAC14-208ENST00000566655 CDCA7Q9BWT1 371 aaPredicted RBP20.2■□□□□ 0.82
VAC14-208ENST00000566655 CABP4P57796 275 aa20.19■□□□□ 0.82
VAC14-208ENST00000566655 SLC39A6Q13433 755 aa20.19■□□□□ 0.82
VAC14-208ENST00000566655 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
VAC14-208ENST00000566655 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
VAC14-208ENST00000566655 AAMPQ13685 434 aa20.18■□□□□ 0.82
VAC14-208ENST00000566655 VPS72Q15906 364 aa20.18■□□□□ 0.82
VAC14-208ENST00000566655 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
VAC14-208ENST00000566655 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
VAC14-208ENST00000566655 PTPRCP08575 1304 aa20.17■□□□□ 0.82
VAC14-208ENST00000566655 NGLY1Q96IV0 654 aa20.17■□□□□ 0.82
VAC14-208ENST00000566655 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
VAC14-208ENST00000566655 HDGFL1Q5TGJ6 251 aa20.16■□□□□ 0.82
VAC14-208ENST00000566655 KDM2BQ8NHM5 1336 aa20.16■□□□□ 0.82
VAC14-208ENST00000566655 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
VAC14-208ENST00000566655 EXOC5O00471 708 aa20.15■□□□□ 0.82
VAC14-208ENST00000566655 ZNF496Q96IT1 587 aaPredicted RBP20.15■□□□□ 0.82
VAC14-208ENST00000566655 GLI3P10071 1580 aa20.15■□□□□ 0.82
VAC14-208ENST00000566655 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
VAC14-208ENST00000566655 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
VAC14-208ENST00000566655 STK31Q9BXU1 1019 aa20.14■□□□□ 0.81
VAC14-208ENST00000566655 INTS3Q68E01 1043 aaKnown RBP20.13■□□□□ 0.81
VAC14-208ENST00000566655 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
VAC14-208ENST00000566655 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
VAC14-208ENST00000566655 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
VAC14-208ENST00000566655 PCDHB15Q9Y5E8 787 aa20.13■□□□□ 0.81
VAC14-208ENST00000566655 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
VAC14-208ENST00000566655 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
VAC14-208ENST00000566655 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
VAC14-208ENST00000566655 FLIIQ13045 1269 aa20.12■□□□□ 0.81
VAC14-208ENST00000566655 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
VAC14-208ENST00000566655 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
VAC14-208ENST00000566655 PDIA6Q15084 440 aa20.1■□□□□ 0.81
VAC14-208ENST00000566655 USP21Q9UK80 565 aa20.1■□□□□ 0.81
VAC14-208ENST00000566655 KCPQ6ZWJ8 1503 aa20.1■□□□□ 0.81
VAC14-208ENST00000566655 PAPPAQ13219 1627 aa20.1■□□□□ 0.81
VAC14-208ENST00000566655 DDB1Q16531 1140 aa20.09■□□□□ 0.81
VAC14-208ENST00000566655 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
VAC14-208ENST00000566655 PIGBQ92521 554 aa20.09■□□□□ 0.81
VAC14-208ENST00000566655 FMNL2Q96PY5 1086 aa20.09■□□□□ 0.81
VAC14-208ENST00000566655 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
VAC14-208ENST00000566655 IGHDP01880 384 aa20.08■□□□□ 0.81
VAC14-208ENST00000566655 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
VAC14-208ENST00000566655 CCDC9Q9Y3X0 531 aaKnown RBP20.08■□□□□ 0.81
VAC14-208ENST00000566655 PROSER3Q2NL68 480 aa20.08■□□□□ 0.8
VAC14-208ENST00000566655 TTC5Q8N0Z6 440 aa20.08■□□□□ 0.8
VAC14-208ENST00000566655 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.8
VAC14-208ENST00000566655 BCL9O00512 1426 aa20.07■□□□□ 0.8
VAC14-208ENST00000566655 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
VAC14-208ENST00000566655 F6X3S4 739 aa20.07■□□□□ 0.8
VAC14-208ENST00000566655 FAM98CQ17RN3 349 aaKnown RBP20.07■□□□□ 0.8
VAC14-208ENST00000566655 TMOD3Q9NYL9 352 aa20.07■□□□□ 0.8
VAC14-208ENST00000566655 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
VAC14-208ENST00000566655 AFF2P51816 1311 aa20.06■□□□□ 0.8
VAC14-208ENST00000566655 ANXA1P04083 346 aa20.06■□□□□ 0.8
VAC14-208ENST00000566655 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms