RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 ZNF530Q6P9A1 599 aaPredicted RBP30.48■■■□□ 2.47
GGA2-206ENST00000566547 YBX3P16989 372 aaKnown RBP eCLIP30.47■■■□□ 2.478e-9■□□□□ 9.2
GGA2-206ENST00000566547 GNPATO15228 680 aa30.45■■■□□ 2.47
GGA2-206ENST00000566547 AMER1Q5JTC6 1135 aaPredicted RBP30.45■■■□□ 2.47
GGA2-206ENST00000566547 KDM6AO15550 1401 aaPredicted RBP30.45■■■□□ 2.46
GGA2-206ENST00000566547 PLEKHG2Q9H7P9 1386 aa30.44■■■□□ 2.46
GGA2-206ENST00000566547 SULT6B1Q6IMI4 303 aa30.44■■■□□ 2.46
GGA2-206ENST00000566547 SLC4A9Q96Q91 983 aa30.44■■■□□ 2.46
GGA2-206ENST00000566547 SSFA2P28290 1259 aa30.43■■■□□ 2.46
GGA2-206ENST00000566547 DCAF5Q96JK2 942 aa30.43■■■□□ 2.46
GGA2-206ENST00000566547 RBM42Q9BTD8 480 aaKnown RBP30.43■■■□□ 2.46
GGA2-206ENST00000566547 ERVV-2B6SEH9 535 aa30.42■■■□□ 2.46
GGA2-206ENST00000566547 KDRP35968 1356 aa30.41■■■□□ 2.46
GGA2-206ENST00000566547 HSP90AB1P08238 724 aaKnown RBP30.41■■■□□ 2.46
GGA2-206ENST00000566547 IL13P35225 146 aa30.41■■■□□ 2.46
GGA2-206ENST00000566547 AMOTQ4VCS5 1084 aa30.41■■■□□ 2.46
GGA2-206ENST00000566547 CD2APQ9Y5K6 639 aa30.4■■■□□ 2.46
GGA2-206ENST00000566547 CABP4P57796 275 aa30.38■■■□□ 2.45
GGA2-206ENST00000566547 MTHFSP49914 203 aa30.37■■■□□ 2.45
GGA2-206ENST00000566547 C1orf141Q5JVX7 400 aa30.37■■■□□ 2.45
GGA2-206ENST00000566547 WWC3Q9ULE0 1092 aa30.37■■■□□ 2.45
GGA2-206ENST00000566547 COL5A3P25940 1745 aaPredicted RBP30.36■■■□□ 2.45
GGA2-206ENST00000566547 ZNF831Q5JPB2 1677 aa30.34■■■□□ 2.45
GGA2-206ENST00000566547 CNGB1Q14028 1251 aaPredicted RBP30.34■■■□□ 2.45
GGA2-206ENST00000566547 CC2D1BQ5T0F9 858 aaKnown RBP30.34■■■□□ 2.45
GGA2-206ENST00000566547 GRIN3BO60391 1043 aa30.33■■■□□ 2.45
GGA2-206ENST00000566547 NFATC2IPQ8NCF5 419 aa30.33■■■□□ 2.45
GGA2-206ENST00000566547 PER1O15534 1290 aaPredicted RBP30.32■■■□□ 2.44
GGA2-206ENST00000566547 PTCD1O75127 700 aaKnown RBP30.32■■■□□ 2.44
GGA2-206ENST00000566547 RTCBQ9Y3I0 505 aaKnown RBP30.32■■■□□ 2.44
GGA2-206ENST00000566547 MYH14Q7Z406 1995 aaKnown RBP30.32■■■□□ 2.44
GGA2-206ENST00000566547 SCN11AQ9UI33 1791 aa30.31■■■□□ 2.44
GGA2-206ENST00000566547 HMOX1P09601 288 aa30.31■■■□□ 2.44
GGA2-206ENST00000566547 TRAPPC3LQ5T215 181 aa30.3■■■□□ 2.44
GGA2-206ENST00000566547 MMP10P09238 476 aa30.29■■■□□ 2.44
GGA2-206ENST00000566547 ARHGEF1Q92888 912 aaKnown RBP30.28■■■□□ 2.44
GGA2-206ENST00000566547 CNTNAP4Q9C0A0 1308 aa30.26■■■□□ 2.44
GGA2-206ENST00000566547 RC3H1Q5TC82 1133 aaKnown RBP30.26■■■□□ 2.43
GGA2-206ENST00000566547 VIRMAQ69YN4 1812 aaKnown RBP30.26■■■□□ 2.43
GGA2-206ENST00000566547 LGR6Q9HBX8 967 aa30.25■■■□□ 2.43
GGA2-206ENST00000566547 C4AP0C0L4 1744 aa30.25■■■□□ 2.43
GGA2-206ENST00000566547 TJP1Q07157 1748 aa30.25■■■□□ 2.43
GGA2-206ENST00000566547 AKAP4Q5JQC9 854 aa30.24■■■□□ 2.43
GGA2-206ENST00000566547 CICQ96RK0 1608 aaPredicted RBP30.24■■■□□ 2.43
GGA2-206ENST00000566547 RPS6KA4O75676 772 aa30.23■■■□□ 2.43
GGA2-206ENST00000566547 DIAPH1O60610 1272 aaKnown RBP30.21■■■□□ 2.43
GGA2-206ENST00000566547 GYS1P13807 737 aa30.21■■■□□ 2.43
GGA2-206ENST00000566547 RFC4P35249 363 aa30.21■■■□□ 2.43
GGA2-206ENST00000566547 CRKLP46109 303 aaKnown RBP30.21■■■□□ 2.43
GGA2-206ENST00000566547 C1QTNF8P60827 252 aa30.21■■■□□ 2.43
GGA2-206ENST00000566547 N4BP2Q86UW6 1770 aaPredicted RBP30.2■■■□□ 2.43
GGA2-206ENST00000566547 ADRA2BP18089 450 aa30.2■■■□□ 2.43
GGA2-206ENST00000566547 MTHFSDQ2M296 383 aaKnown RBP30.19■■■□□ 2.42
GGA2-206ENST00000566547 NLGN1Q8N2Q7 840 aa30.19■■■□□ 2.42
GGA2-206ENST00000566547 SLC52A2Q9HAB3 445 aa30.19■■■□□ 2.42
GGA2-206ENST00000566547 KIF13BQ9NQT8 1826 aa30.19■■■□□ 2.42
GGA2-206ENST00000566547 KIAA1551Q9HCM1 1747 aa30.19■■■□□ 2.42
GGA2-206ENST00000566547 RNMTO43148 476 aaKnown RBP30.18■■■□□ 2.42
GGA2-206ENST00000566547 GIGYF1O75420 1035 aaPredicted RBP30.18■■■□□ 2.42
GGA2-206ENST00000566547 SRP68Q9UHB9 627 aaKnown RBP30.18■■■□□ 2.42
GGA2-206ENST00000566547 ATP10DQ9P241 1426 aa30.17■■■□□ 2.42
GGA2-206ENST00000566547 SLC39A6Q13433 755 aa30.17■■■□□ 2.42
GGA2-206ENST00000566547 PXDNLA1KZ92 1463 aa30.16■■■□□ 2.42
GGA2-206ENST00000566547 COL3A1P02461 1466 aaPredicted RBP30.15■■■□□ 2.42
GGA2-206ENST00000566547 DNAJC10Q8IXB1 793 aa30.15■■■□□ 2.42
GGA2-206ENST00000566547 MRC1P22897 1456 aa30.14■■■□□ 2.42
GGA2-206ENST00000566547 C10orf71Q711Q0 1435 aa30.13■■■□□ 2.41
GGA2-206ENST00000566547 SENP3-EIF4A1A0A087X0R7 540 aa30.13■■■□□ 2.41
GGA2-206ENST00000566547 A0A0G2JLW4 131 aa30.13■■■□□ 2.41
GGA2-206ENST00000566547 INTS5Q6P9B9 1019 aaKnown RBP30.13■■■□□ 2.41
GGA2-206ENST00000566547 U2SURPO15042 1029 aaKnown RBP30.12■■■□□ 2.41
GGA2-206ENST00000566547 ADAMTS7Q9UKP4 1686 aa30.11■■■□□ 2.41
GGA2-206ENST00000566547 PARP3Q9Y6F1 533 aa30.11■■■□□ 2.41
GGA2-206ENST00000566547 NPC1L1Q9UHC9 1359 aa30.11■■■□□ 2.41
GGA2-206ENST00000566547 FKBP8Q14318 412 aa30.1■■■□□ 2.41
GGA2-206ENST00000566547 ZNF526Q8TF50 670 aaPredicted RBP30.1■■■□□ 2.41
GGA2-206ENST00000566547 KCPQ6ZWJ8 1503 aa30.1■■■□□ 2.41
GGA2-206ENST00000566547 ADCY9O60503 1353 aa30.09■■■□□ 2.41
GGA2-206ENST00000566547 USP42Q9H9J4 1324 aaKnown RBP30.09■■■□□ 2.41
GGA2-206ENST00000566547 CCDC87Q9NVE4 849 aa30.09■■■□□ 2.41
GGA2-206ENST00000566547 TGFB2P61812 414 aa30.08■■■□□ 2.41
GGA2-206ENST00000566547 DPEP1P16444 411 aa30.07■■■□□ 2.4
GGA2-206ENST00000566547 BCS1LQ9Y276 419 aa30.07■■■□□ 2.4
GGA2-206ENST00000566547 CEP350Q5VT06 3117 aa30.06■■■□□ 2.4
GGA2-206ENST00000566547 DDR1Q08345 913 aa30.06■■■□□ 2.4
GGA2-206ENST00000566547 CYP19A1P11511 503 aaPredicted RBP30.05■■■□□ 2.4
GGA2-206ENST00000566547 BRCA1P38398 1863 aaKnown RBP30.04■■■□□ 2.4
GGA2-206ENST00000566547 UBR2Q8IWV8 1755 aa30.03■■■□□ 2.4
GGA2-206ENST00000566547 SOS1Q07889 1333 aaPredicted RBP30.03■■■□□ 2.4
GGA2-206ENST00000566547 USPL1Q5W0Q7 1092 aa30.03■■■□□ 2.4
GGA2-206ENST00000566547 GPBP1L1Q9HC44 474 aaPredicted RBP30.03■■■□□ 2.4
GGA2-206ENST00000566547 ZBTB1Q9Y2K1 713 aa30.02■■■□□ 2.4
GGA2-206ENST00000566547 ZPR1O75312 459 aa30■■■□□ 2.39
GGA2-206ENST00000566547 KCNA3P22001 575 aa30■■■□□ 2.39
GGA2-206ENST00000566547 IL17REQ8NFR9 667 aa30■■■□□ 2.39
GGA2-206ENST00000566547 FCHSD2O94868 740 aa29.99■■■□□ 2.39
GGA2-206ENST00000566547 COL15A1P39059 1388 aa29.98■■■□□ 2.39
GGA2-206ENST00000566547 GNAT3A8MTJ3 354 aa29.97■■■□□ 2.39
GGA2-206ENST00000566547 POLRMTO00411 1230 aaKnown RBP29.97■■■□□ 2.39
GGA2-206ENST00000566547 TM4SF1P30408 202 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms