RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
CFDP1-206ENST00000566254 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
CFDP1-206ENST00000566254 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
CFDP1-206ENST00000566254 SOS2Q07890 1332 aaPredicted RBP13.27□□□□□ -0.29
CFDP1-206ENST00000566254 PTCH1Q13635 1447 aa13.27□□□□□ -0.29
CFDP1-206ENST00000566254 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
CFDP1-206ENST00000566254 MRPL50Q8N5N7 158 aaKnown RBP13.26□□□□□ -0.29
CFDP1-206ENST00000566254 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
CFDP1-206ENST00000566254 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
CFDP1-206ENST00000566254 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
CFDP1-206ENST00000566254 CFHP08603 1231 aa13.25□□□□□ -0.29
CFDP1-206ENST00000566254 HRCP23327 699 aa13.25□□□□□ -0.29
CFDP1-206ENST00000566254 HLA-CQ95604 372 aa13.25□□□□□ -0.29
CFDP1-206ENST00000566254 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
CFDP1-206ENST00000566254 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
CFDP1-206ENST00000566254 POM121Q96HA1 1249 aa13.24□□□□□ -0.29
CFDP1-206ENST00000566254 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
CFDP1-206ENST00000566254 LAMC1P11047 1609 aa13.24□□□□□ -0.29
CFDP1-206ENST00000566254 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
CFDP1-206ENST00000566254 HRO43593 1189 aa13.23□□□□□ -0.29
CFDP1-206ENST00000566254 TRAK2O60296 914 aa13.23□□□□□ -0.29
CFDP1-206ENST00000566254 FUT2Q10981 343 aa13.23□□□□□ -0.29
CFDP1-206ENST00000566254 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
CFDP1-206ENST00000566254 IQGAP3Q86VI3 1631 aa13.22□□□□□ -0.29
CFDP1-206ENST00000566254 RNF40O75150 1001 aa13.22□□□□□ -0.29
CFDP1-206ENST00000566254 DEFB132Q7Z7B7 95 aa13.22□□□□□ -0.29
CFDP1-206ENST00000566254 GJD4Q96KN9 370 aaPredicted RBP13.22□□□□□ -0.29
CFDP1-206ENST00000566254 MYOM2P54296 1465 aa13.22□□□□□ -0.29
CFDP1-206ENST00000566254 RAD21O60216 631 aa13.21□□□□□ -0.29
CFDP1-206ENST00000566254 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
CFDP1-206ENST00000566254 MTMR14Q8NCE2 650 aa13.21□□□□□ -0.29
CFDP1-206ENST00000566254 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
CFDP1-206ENST00000566254 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.3
CFDP1-206ENST00000566254 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
CFDP1-206ENST00000566254 NUP155O75694 1391 aa13.2□□□□□ -0.3
CFDP1-206ENST00000566254 AP1G2O75843 785 aa13.2□□□□□ -0.3
CFDP1-206ENST00000566254 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
CFDP1-206ENST00000566254 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CFDP1-206ENST00000566254 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
CFDP1-206ENST00000566254 APBB1O00213 710 aa13.18□□□□□ -0.3
CFDP1-206ENST00000566254 ITGAEP38570 1179 aa13.18□□□□□ -0.3
CFDP1-206ENST00000566254 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
CFDP1-206ENST00000566254 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
CFDP1-206ENST00000566254 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
CFDP1-206ENST00000566254 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
CFDP1-206ENST00000566254 MTMR2Q13614 643 aa13.17□□□□□ -0.3
CFDP1-206ENST00000566254 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
CFDP1-206ENST00000566254 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
CFDP1-206ENST00000566254 LRP5O75197 1615 aa13.17□□□□□ -0.3
CFDP1-206ENST00000566254 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 GLI3P10071 1580 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 PXDNQ92626 1479 aa13.16□□□□□ -0.3
CFDP1-206ENST00000566254 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
CFDP1-206ENST00000566254 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
CFDP1-206ENST00000566254 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
CFDP1-206ENST00000566254 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
CFDP1-206ENST00000566254 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
CFDP1-206ENST00000566254 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
CFDP1-206ENST00000566254 FOXO3O43524 673 aa13.14□□□□□ -0.31
CFDP1-206ENST00000566254 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
CFDP1-206ENST00000566254 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
CFDP1-206ENST00000566254 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
CFDP1-206ENST00000566254 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
CFDP1-206ENST00000566254 SLIT2O94813 1529 aa13.13□□□□□ -0.31
CFDP1-206ENST00000566254 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
CFDP1-206ENST00000566254 MORN1Q5T089 497 aa13.12□□□□□ -0.31
CFDP1-206ENST00000566254 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
CFDP1-206ENST00000566254 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
CFDP1-206ENST00000566254 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
CFDP1-206ENST00000566254 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
CFDP1-206ENST00000566254 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
CFDP1-206ENST00000566254 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
CFDP1-206ENST00000566254 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
CFDP1-206ENST00000566254 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
CFDP1-206ENST00000566254 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
CFDP1-206ENST00000566254 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
CFDP1-206ENST00000566254 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
CFDP1-206ENST00000566254 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
CFDP1-206ENST00000566254 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
CFDP1-206ENST00000566254 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
CFDP1-206ENST00000566254 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
CFDP1-206ENST00000566254 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
CFDP1-206ENST00000566254 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
CFDP1-206ENST00000566254 ARID3AQ99856 593 aa13.08□□□□□ -0.32
CFDP1-206ENST00000566254 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
CFDP1-206ENST00000566254 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
CFDP1-206ENST00000566254 BCAMP50895 628 aa13.07□□□□□ -0.32
CFDP1-206ENST00000566254 PPP4CP60510 307 aa13.07□□□□□ -0.32
CFDP1-206ENST00000566254 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
CFDP1-206ENST00000566254 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
CFDP1-206ENST00000566254 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
CFDP1-206ENST00000566254 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
CFDP1-206ENST00000566254 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
CFDP1-206ENST00000566254 BAG6P46379 1132 aa13.06□□□□□ -0.32
CFDP1-206ENST00000566254 VPS72Q15906 364 aa13.06□□□□□ -0.32
CFDP1-206ENST00000566254 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
CFDP1-206ENST00000566254 NAIPQ13075 1403 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms