RNA–Protein interactions for RNA: ENST00000565459.1

EPB42-205, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 2

Gene EPB42, Length 679 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-205ENST00000565459 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
EPB42-205ENST00000565459 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.39
EPB42-205ENST00000565459 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
EPB42-205ENST00000565459 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 TMF1P82094 1093 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 FLT4P35916 1363 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 KIF24Q5T7B8 1368 aa12.64□□□□□ -0.39
EPB42-205ENST00000565459 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
EPB42-205ENST00000565459 HTRA3P83110 453 aa12.63□□□□□ -0.39
EPB42-205ENST00000565459 RTCBQ9Y3I0 505 aaKnown RBP12.63□□□□□ -0.39
EPB42-205ENST00000565459 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 FYB1O15117 783 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 DPEP1P16444 411 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 ITPK1Q13572 414 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
EPB42-205ENST00000565459 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
EPB42-205ENST00000565459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
EPB42-205ENST00000565459 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
EPB42-205ENST00000565459 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
EPB42-205ENST00000565459 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
EPB42-205ENST00000565459 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
EPB42-205ENST00000565459 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 RFC4P35249 363 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
EPB42-205ENST00000565459 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
EPB42-205ENST00000565459 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 TESK2Q96S53 571 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 RNF181Q9P0P0 153 aa12.59□□□□□ -0.39
EPB42-205ENST00000565459 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
EPB42-205ENST00000565459 GYS1P13807 737 aa12.58□□□□□ -0.4
EPB42-205ENST00000565459 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
EPB42-205ENST00000565459 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
EPB42-205ENST00000565459 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
EPB42-205ENST00000565459 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
EPB42-205ENST00000565459 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
EPB42-205ENST00000565459 KCNA3P22001 575 aa12.57□□□□□ -0.4
EPB42-205ENST00000565459 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
EPB42-205ENST00000565459 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
EPB42-205ENST00000565459 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
EPB42-205ENST00000565459 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
EPB42-205ENST00000565459 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
EPB42-205ENST00000565459 PHKG2P15735 406 aa12.56□□□□□ -0.4
EPB42-205ENST00000565459 CNTNAP4Q9C0A0 1308 aa12.56□□□□□ -0.4
EPB42-205ENST00000565459 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
EPB42-205ENST00000565459 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
EPB42-205ENST00000565459 SBF1O95248 1867 aa12.55□□□□□ -0.4
EPB42-205ENST00000565459 KDRP35968 1356 aa12.55□□□□□ -0.4
EPB42-205ENST00000565459 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
EPB42-205ENST00000565459 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
EPB42-205ENST00000565459 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
EPB42-205ENST00000565459 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
EPB42-205ENST00000565459 EYA1Q99502 592 aa12.53□□□□□ -0.4
EPB42-205ENST00000565459 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
EPB42-205ENST00000565459 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
EPB42-205ENST00000565459 HSP90AB1P08238 724 aaKnown RBP12.52□□□□□ -0.41
EPB42-205ENST00000565459 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
EPB42-205ENST00000565459 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
EPB42-205ENST00000565459 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
EPB42-205ENST00000565459 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
EPB42-205ENST00000565459 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
EPB42-205ENST00000565459 LMNB1P20700 586 aa12.5□□□□□ -0.41
EPB42-205ENST00000565459 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
EPB42-205ENST00000565459 USP42Q9H9J4 1324 aaKnown RBP12.49□□□□□ -0.41
EPB42-205ENST00000565459 CHRNA5P30532 468 aa12.49□□□□□ -0.41
EPB42-205ENST00000565459 FKBP8Q14318 412 aa12.49□□□□□ -0.41
EPB42-205ENST00000565459 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
EPB42-205ENST00000565459 CABP4P57796 275 aa12.48□□□□□ -0.41
EPB42-205ENST00000565459 DDR1Q08345 913 aa12.48□□□□□ -0.41
EPB42-205ENST00000565459 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
EPB42-205ENST00000565459 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
EPB42-205ENST00000565459 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
EPB42-205ENST00000565459 TM4SF1P30408 202 aa12.47□□□□□ -0.41
EPB42-205ENST00000565459 RASSF7Q02833 373 aa12.47□□□□□ -0.41
EPB42-205ENST00000565459 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
EPB42-205ENST00000565459 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
EPB42-205ENST00000565459 ZPR1O75312 459 aa12.46□□□□□ -0.41
EPB42-205ENST00000565459 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.41
EPB42-205ENST00000565459 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
EPB42-205ENST00000565459 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
EPB42-205ENST00000565459 SLC34A2O95436 690 aa12.45□□□□□ -0.42
EPB42-205ENST00000565459 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
EPB42-205ENST00000565459 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
EPB42-205ENST00000565459 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
EPB42-205ENST00000565459 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
EPB42-205ENST00000565459 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
EPB42-205ENST00000565459 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
EPB42-205ENST00000565459 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
EPB42-205ENST00000565459 MTHFSP49914 203 aa12.43□□□□□ -0.42
EPB42-205ENST00000565459 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
EPB42-205ENST00000565459 POTECB2RU33 542 aa12.42□□□□□ -0.42
EPB42-205ENST00000565459 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms