RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 GDF2Q9UK05 429 aaPredicted RBP9.45□□□□□ -0.9
CHD9-215ENST00000565442 PHF24Q9UPV7 400 aa9.45□□□□□ -0.9
CHD9-215ENST00000565442 GPAMQ9HCL2 828 aa9.44□□□□□ -0.9
CHD9-215ENST00000565442 TRAK2O60296 914 aa9.43□□□□□ -0.9
CHD9-215ENST00000565442 EDARADDQ8WWZ3 215 aa9.43□□□□□ -0.9
CHD9-215ENST00000565442 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
CHD9-215ENST00000565442 PCDHB11Q9Y5F2 797 aa9.42□□□□□ -0.9
CHD9-215ENST00000565442 GRIN2CQ14957 1233 aa9.41□□□□□ -0.9
CHD9-215ENST00000565442 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
CHD9-215ENST00000565442 RAB6BQ9NRW1 208 aa9.41□□□□□ -0.9
CHD9-215ENST00000565442 A0A1B0GTH6 734 aa9.4□□□□□ -0.9
CHD9-215ENST00000565442 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
CHD9-215ENST00000565442 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
CHD9-215ENST00000565442 PHKA2P46019 1235 aa9.39□□□□□ -0.91
CHD9-215ENST00000565442 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
CHD9-215ENST00000565442 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
CHD9-215ENST00000565442 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
CHD9-215ENST00000565442 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
CHD9-215ENST00000565442 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
CHD9-215ENST00000565442 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
CHD9-215ENST00000565442 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CHD9-215ENST00000565442 GNRH1P01148 92 aa9.38□□□□□ -0.91
CHD9-215ENST00000565442 AMPD1P23109 780 aa9.38□□□□□ -0.91
CHD9-215ENST00000565442 CENPCQ03188 943 aa9.38□□□□□ -0.91
CHD9-215ENST00000565442 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
CHD9-215ENST00000565442 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
CHD9-215ENST00000565442 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
CHD9-215ENST00000565442 IL2RAP01589 272 aa9.37□□□□□ -0.91
CHD9-215ENST00000565442 TMEM259Q4ZIN3 620 aa9.37□□□□□ -0.91
CHD9-215ENST00000565442 SLCO4C1Q6ZQN7 724 aa9.37□□□□□ -0.91
CHD9-215ENST00000565442 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
CHD9-215ENST00000565442 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
CHD9-215ENST00000565442 PIK3R2O00459 728 aa9.36□□□□□ -0.91
CHD9-215ENST00000565442 BMP4P12644 408 aa9.36□□□□□ -0.91
CHD9-215ENST00000565442 ZSCAN10Q96SZ4 725 aaPredicted RBP9.36□□□□□ -0.91
CHD9-215ENST00000565442 C1QTNF9BB2RNN3 333 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 C2CD2LO14523 706 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 GNB5O14775 395 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 NR1H3Q13133 447 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 PGBD3Q8N328 593 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
CHD9-215ENST00000565442 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
CHD9-215ENST00000565442 ABHD17AQ96GS6 310 aa9.34□□□□□ -0.91
CHD9-215ENST00000565442 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
CHD9-215ENST00000565442 HRH3Q9Y5N1 445 aa9.34□□□□□ -0.91
CHD9-215ENST00000565442 FGFR3P22607 806 aa9.33□□□□□ -0.92
CHD9-215ENST00000565442 GTF2E1P29083 439 aaPredicted RBP9.33□□□□□ -0.92
CHD9-215ENST00000565442 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
CHD9-215ENST00000565442 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
CHD9-215ENST00000565442 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
CHD9-215ENST00000565442 CD163Q86VB7 1156 aa9.33□□□□□ -0.92
CHD9-215ENST00000565442 MSX1P28360 303 aa9.32□□□□□ -0.92
CHD9-215ENST00000565442 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
CHD9-215ENST00000565442 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
CHD9-215ENST00000565442 BNIP3LO60238 219 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 EPXP11678 715 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 CHRNA4P43681 627 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 DGKGP49619 791 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 CTBSQ01459 385 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 BTBD6Q96KE9 485 aa9.31□□□□□ -0.92
CHD9-215ENST00000565442 NOP53Q9NZM5 478 aaKnown RBP9.31□□□□□ -0.92
CHD9-215ENST00000565442 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
CHD9-215ENST00000565442 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
CHD9-215ENST00000565442 ARAFP10398 606 aa9.29□□□□□ -0.92
CHD9-215ENST00000565442 ITGB7P26010 798 aa9.29□□□□□ -0.92
CHD9-215ENST00000565442 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
CHD9-215ENST00000565442 CRISPLD1Q9H336 500 aa9.29□□□□□ -0.92
CHD9-215ENST00000565442 GOPCQ9HD26 462 aa9.29□□□□□ -0.92
CHD9-215ENST00000565442 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
CHD9-215ENST00000565442 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
CHD9-215ENST00000565442 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
CHD9-215ENST00000565442 RHBDD1Q8TEB9 315 aa9.27□□□□□ -0.93
CHD9-215ENST00000565442 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
CHD9-215ENST00000565442 NEURL1BA8MQ27 555 aa9.26□□□□□ -0.93
CHD9-215ENST00000565442 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
CHD9-215ENST00000565442 GPR37L1O60883 481 aa9.25□□□□□ -0.93
CHD9-215ENST00000565442 FIGNL1Q6PIW4 674 aa9.25□□□□□ -0.93
CHD9-215ENST00000565442 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
CHD9-215ENST00000565442 DOC2BQ14184 412 aa9.24□□□□□ -0.93
CHD9-215ENST00000565442 CHSY3Q70JA7 882 aa9.24□□□□□ -0.93
CHD9-215ENST00000565442 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
CHD9-215ENST00000565442 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
CHD9-215ENST00000565442 CEP126Q9P2H0 1117 aa9.23□□□□□ -0.93
CHD9-215ENST00000565442 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
CHD9-215ENST00000565442 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 TLR1Q15399 786 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 TBC1D9Q6ZT07 1266 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 ZCCHC2Q9C0B9 1178 aaKnown RBP9.22□□□□□ -0.93
CHD9-215ENST00000565442 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
CHD9-215ENST00000565442 ADH6P28332 368 aa9.21□□□□□ -0.94
CHD9-215ENST00000565442 PLA2G4AP47712 749 aa9.21□□□□□ -0.94
CHD9-215ENST00000565442 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
CHD9-215ENST00000565442 SOCS7O14512 581 aa9.2□□□□□ -0.94
CHD9-215ENST00000565442 STAU1O95793 577 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms