RNA–Protein interactions for RNA: ENST00000564951.1

NEIL1-207, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-207ENST00000564951 MMP10P09238 476 aa19.25■□□□□ 0.67
NEIL1-207ENST00000564951 ITPK1Q13572 414 aa19.25■□□□□ 0.67
NEIL1-207ENST00000564951 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
NEIL1-207ENST00000564951 GNPATO15228 680 aa19.24■□□□□ 0.67
NEIL1-207ENST00000564951 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
NEIL1-207ENST00000564951 PLEKHG2Q9H7P9 1386 aa19.21■□□□□ 0.67
NEIL1-207ENST00000564951 HTRA3P83110 453 aa19.21■□□□□ 0.67
NEIL1-207ENST00000564951 COL13A1Q5TAT6 717 aaPredicted RBP19.21■□□□□ 0.67
NEIL1-207ENST00000564951 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
NEIL1-207ENST00000564951 BCS1LQ9Y276 419 aa19.21■□□□□ 0.67
NEIL1-207ENST00000564951 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
NEIL1-207ENST00000564951 TGFB2P61812 414 aa19.2■□□□□ 0.66
NEIL1-207ENST00000564951 RBM46Q8TBY0 533 aaKnown RBP19.2■□□□□ 0.66
NEIL1-207ENST00000564951 KLRG1Q96E93 195 aa19.2■□□□□ 0.66
NEIL1-207ENST00000564951 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
NEIL1-207ENST00000564951 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
NEIL1-207ENST00000564951 A0A0G2JLW4 131 aa19.19■□□□□ 0.66
NEIL1-207ENST00000564951 ADAMTS7Q9UKP4 1686 aa19.18■□□□□ 0.66
NEIL1-207ENST00000564951 TIAM2Q8IVF5 1701 aa19.18■□□□□ 0.66
NEIL1-207ENST00000564951 DLEC1Q9Y238 1755 aa19.18■□□□□ 0.66
NEIL1-207ENST00000564951 TJP1Q07157 1748 aa19.17■□□□□ 0.66
NEIL1-207ENST00000564951 TMOD3Q9NYL9 352 aa19.17■□□□□ 0.66
NEIL1-207ENST00000564951 TONSLQ96HA7 1378 aa19.17■□□□□ 0.66
NEIL1-207ENST00000564951 DPEP1P16444 411 aa19.16■□□□□ 0.66
NEIL1-207ENST00000564951 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
NEIL1-207ENST00000564951 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
NEIL1-207ENST00000564951 EMILIN1Q9Y6C2 1016 aa19.16■□□□□ 0.66
NEIL1-207ENST00000564951 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
NEIL1-207ENST00000564951 FSTL1Q12841 308 aa19.14■□□□□ 0.65
NEIL1-207ENST00000564951 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
NEIL1-207ENST00000564951 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
NEIL1-207ENST00000564951 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
NEIL1-207ENST00000564951 AFDNP55196 1824 aaKnown RBP19.14■□□□□ 0.65
NEIL1-207ENST00000564951 FCHSD2O94868 740 aa19.13■□□□□ 0.65
NEIL1-207ENST00000564951 GYS1P13807 737 aa19.13■□□□□ 0.65
NEIL1-207ENST00000564951 KCNA3P22001 575 aa19.13■□□□□ 0.65
NEIL1-207ENST00000564951 SLC4A9Q96Q91 983 aa19.13■□□□□ 0.65
NEIL1-207ENST00000564951 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
NEIL1-207ENST00000564951 PHKG2P15735 406 aa19.12■□□□□ 0.65
NEIL1-207ENST00000564951 TMF1P82094 1093 aa19.12■□□□□ 0.65
NEIL1-207ENST00000564951 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
NEIL1-207ENST00000564951 CCDC87Q9NVE4 849 aa19.12■□□□□ 0.65
NEIL1-207ENST00000564951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.12■□□□□ 0.65
NEIL1-207ENST00000564951 CNTNAP4Q9C0A0 1308 aa19.11■□□□□ 0.65
NEIL1-207ENST00000564951 CAPN15O75808 1086 aa19.11■□□□□ 0.65
NEIL1-207ENST00000564951 RTCBQ9Y3I0 505 aaKnown RBP19.11■□□□□ 0.65
NEIL1-207ENST00000564951 ADRA2BP18089 450 aa19.1■□□□□ 0.65
NEIL1-207ENST00000564951 TRAPPC3LQ5T215 181 aa19.1■□□□□ 0.65
NEIL1-207ENST00000564951 C16orf71Q8IYS4 520 aaPredicted RBP19.1■□□□□ 0.65
NEIL1-207ENST00000564951 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
NEIL1-207ENST00000564951 DCAF5Q96JK2 942 aa19.1■□□□□ 0.65
NEIL1-207ENST00000564951 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
NEIL1-207ENST00000564951 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
NEIL1-207ENST00000564951 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
NEIL1-207ENST00000564951 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
NEIL1-207ENST00000564951 TNS4Q8IZW8 715 aa19.09■□□□□ 0.65
NEIL1-207ENST00000564951 EYA1Q99502 592 aa19.09■□□□□ 0.65
NEIL1-207ENST00000564951 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.65
NEIL1-207ENST00000564951 PRELPP51888 382 aa19.08■□□□□ 0.64
NEIL1-207ENST00000564951 IFNL2Q8IZJ0 200 aa19.08■□□□□ 0.64
NEIL1-207ENST00000564951 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
NEIL1-207ENST00000564951 SCN11AQ9UI33 1791 aa19.07■□□□□ 0.64
NEIL1-207ENST00000564951 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
NEIL1-207ENST00000564951 CARD14Q9BXL6 1004 aa19.07■□□□□ 0.64
NEIL1-207ENST00000564951 RNF181Q9P0P0 153 aa19.07■□□□□ 0.64
NEIL1-207ENST00000564951 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
NEIL1-207ENST00000564951 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
NEIL1-207ENST00000564951 PIM2Q9P1W9 311 aa19.05■□□□□ 0.64
NEIL1-207ENST00000564951 DICER1Q9UPY3 1922 aaKnown RBP19.05■□□□□ 0.64
NEIL1-207ENST00000564951 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
NEIL1-207ENST00000564951 RFC4P35249 363 aa19.04■□□□□ 0.64
NEIL1-207ENST00000564951 DDR1Q08345 913 aa19.04■□□□□ 0.64
NEIL1-207ENST00000564951 RRAGCQ9HB90 399 aa19.04■□□□□ 0.64
NEIL1-207ENST00000564951 DALRD3Q5D0E6 543 aaKnown RBP19.03■□□□□ 0.64
NEIL1-207ENST00000564951 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
NEIL1-207ENST00000564951 USP42Q9H9J4 1324 aaKnown RBP19.02■□□□□ 0.64
NEIL1-207ENST00000564951 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
NEIL1-207ENST00000564951 SRP68Q9UHB9 627 aaKnown RBP19.01■□□□□ 0.63
NEIL1-207ENST00000564951 ZC3H4Q9UPT8 1303 aaKnown RBP19■□□□□ 0.63
NEIL1-207ENST00000564951 ERVV-2B6SEH9 535 aa19■□□□□ 0.63
NEIL1-207ENST00000564951 HSPA1AP0DMV8 641 aaKnown RBP19■□□□□ 0.63
NEIL1-207ENST00000564951 HSPA1BP0DMV9 641 aaKnown RBP19■□□□□ 0.63
NEIL1-207ENST00000564951 CHRNA5P30532 468 aa19■□□□□ 0.63
NEIL1-207ENST00000564951 FKBP8Q14318 412 aa19■□□□□ 0.63
NEIL1-207ENST00000564951 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
NEIL1-207ENST00000564951 RASSF7Q02833 373 aa18.99■□□□□ 0.63
NEIL1-207ENST00000564951 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
NEIL1-207ENST00000564951 COL11A2P13942 1736 aaPredicted RBP18.99■□□□□ 0.63
NEIL1-207ENST00000564951 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
NEIL1-207ENST00000564951 CRKLP46109 303 aaKnown RBP18.98■□□□□ 0.63
NEIL1-207ENST00000564951 EIF4A2Q14240 407 aaKnown RBP18.98■□□□□ 0.63
NEIL1-207ENST00000564951 POLRMTO00411 1230 aaKnown RBP18.97■□□□□ 0.63
NEIL1-207ENST00000564951 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
NEIL1-207ENST00000564951 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
NEIL1-207ENST00000564951 PTCD1O75127 700 aaKnown RBP18.94■□□□□ 0.62
NEIL1-207ENST00000564951 HSP90AB1P08238 724 aaKnown RBP18.94■□□□□ 0.62
NEIL1-207ENST00000564951 CDCA8Q53HL2 280 aa18.94■□□□□ 0.62
NEIL1-207ENST00000564951 SCN7AQ01118 1682 aa18.93■□□□□ 0.62
NEIL1-207ENST00000564951 MRC1P22897 1456 aa18.93■□□□□ 0.62
NEIL1-207ENST00000564951 ARFGEF2Q9Y6D5 1785 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms