RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 A0A1W2PRU2 124 aa7.65□□□□□ -1.18
RBFOX1-216ENST00000564850 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
RBFOX1-216ENST00000564850 ARAFP10398 606 aa7.65□□□□□ -1.18
RBFOX1-216ENST00000564850 LAMC2Q13753 1193 aa7.65□□□□□ -1.18
RBFOX1-216ENST00000564850 PRRT3Q5FWE3 981 aa7.65□□□□□ -1.18
RBFOX1-216ENST00000564850 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
RBFOX1-216ENST00000564850 GRIP2Q9C0E4 1043 aa7.64□□□□□ -1.19
RBFOX1-216ENST00000564850 FKBPLQ9UIM3 349 aa7.64□□□□□ -1.19
RBFOX1-216ENST00000564850 H2AFB1P0C5Y9 115 aa7.63□□□□□ -1.19
RBFOX1-216ENST00000564850 H2AFB2P0C5Z0 115 aa7.63□□□□□ -1.19
RBFOX1-216ENST00000564850 PTK2Q05397 1052 aa7.63□□□□□ -1.19
RBFOX1-216ENST00000564850 ADAM32Q8TC27 787 aa7.63□□□□□ -1.19
RBFOX1-216ENST00000564850 ABHD17AQ96GS6 310 aa7.63□□□□□ -1.19
RBFOX1-216ENST00000564850 ELNP15502 786 aa7.62□□□□□ -1.19
RBFOX1-216ENST00000564850 CTBSQ01459 385 aa7.62□□□□□ -1.19
RBFOX1-216ENST00000564850 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
RBFOX1-216ENST00000564850 QPCTQ16769 361 aa7.62□□□□□ -1.19
RBFOX1-216ENST00000564850 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
RBFOX1-216ENST00000564850 UBAP2LQ14157 1087 aaKnown RBP7.61□□□□□ -1.19
RBFOX1-216ENST00000564850 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
RBFOX1-216ENST00000564850 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
RBFOX1-216ENST00000564850 NACC1Q96RE7 527 aa7.6□□□□□ -1.19
RBFOX1-216ENST00000564850 DZIP3Q86Y13 1208 aaKnown RBP7.59□□□□□ -1.19
RBFOX1-216ENST00000564850 OCSTAMPQ9BR26 566 aa7.59□□□□□ -1.19
RBFOX1-216ENST00000564850 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
RBFOX1-216ENST00000564850 ESPNB1AK53 854 aa7.58□□□□□ -1.2
RBFOX1-216ENST00000564850 ADH6P28332 368 aa7.58□□□□□ -1.2
RBFOX1-216ENST00000564850 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
RBFOX1-216ENST00000564850 RUBCNLQ9H714 662 aa7.58□□□□□ -1.2
RBFOX1-216ENST00000564850 CLN3Q13286 438 aa7.57□□□□□ -1.2
RBFOX1-216ENST00000564850 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
RBFOX1-216ENST00000564850 TULP1O00294 542 aaPredicted RBP7.56□□□□□ -1.2
RBFOX1-216ENST00000564850 BNIP3LO60238 219 aa7.56□□□□□ -1.2
RBFOX1-216ENST00000564850 LILRB3O75022 631 aa7.56□□□□□ -1.2
RBFOX1-216ENST00000564850 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
RBFOX1-216ENST00000564850 PHKA2P46019 1235 aa7.55□□□□□ -1.2
RBFOX1-216ENST00000564850 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
RBFOX1-216ENST00000564850 IRAK1P51617 712 aa7.54□□□□□ -1.2
RBFOX1-216ENST00000564850 PPP2R2DQ66LE6 453 aa7.54□□□□□ -1.2
RBFOX1-216ENST00000564850 LIMD1Q9UGP4 676 aa7.54□□□□□ -1.2
RBFOX1-216ENST00000564850 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
RBFOX1-216ENST00000564850 AMHR2Q16671 573 aa7.53□□□□□ -1.2
RBFOX1-216ENST00000564850 RTL5Q5HYW3 569 aaPredicted RBP7.53□□□□□ -1.2
RBFOX1-216ENST00000564850 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
RBFOX1-216ENST00000564850 RNF114Q9Y508 228 aa7.53□□□□□ -1.2
RBFOX1-216ENST00000564850 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
RBFOX1-216ENST00000564850 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
RBFOX1-216ENST00000564850 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
RBFOX1-216ENST00000564850 RNF112Q9ULX5 631 aa7.51□□□□□ -1.21
RBFOX1-216ENST00000564850 MSX1P28360 303 aa7.5□□□□□ -1.21
RBFOX1-216ENST00000564850 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
RBFOX1-216ENST00000564850 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
RBFOX1-216ENST00000564850 AVENQ9NQS1 362 aaPredicted RBP7.5□□□□□ -1.21
RBFOX1-216ENST00000564850 KLF15Q9UIH9 416 aa7.5□□□□□ -1.21
RBFOX1-216ENST00000564850 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
RBFOX1-216ENST00000564850 NR6A1Q15406 480 aa7.49□□□□□ -1.21
RBFOX1-216ENST00000564850 CC2D2BQ6DHV5 1058 aa7.49□□□□□ -1.21
RBFOX1-216ENST00000564850 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
RBFOX1-216ENST00000564850 KRTAP4-11Q9BYQ6 195 aa7.49□□□□□ -1.21
RBFOX1-216ENST00000564850 ERVK-9P63128 1117 aa7.48□□□□□ -1.21
RBFOX1-216ENST00000564850 GRIK4Q16099 956 aa7.48□□□□□ -1.21
RBFOX1-216ENST00000564850 GTF2E1P29083 439 aaPredicted RBP7.47□□□□□ -1.21
RBFOX1-216ENST00000564850 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
RBFOX1-216ENST00000564850 MYSM1Q5VVJ2 828 aa7.47□□□□□ -1.21
RBFOX1-216ENST00000564850 LRRN4Q8WUT4 740 aa7.47□□□□□ -1.21
RBFOX1-216ENST00000564850 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
RBFOX1-216ENST00000564850 C9orf172C9J069 976 aa7.46□□□□□ -1.22
RBFOX1-216ENST00000564850 TAL1P17542 331 aaPredicted RBP7.46□□□□□ -1.22
RBFOX1-216ENST00000564850 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
RBFOX1-216ENST00000564850 PCDHGC4Q9Y5F7 938 aa7.46□□□□□ -1.22
RBFOX1-216ENST00000564850 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
RBFOX1-216ENST00000564850 ADGRE1Q14246 886 aa7.45□□□□□ -1.22
RBFOX1-216ENST00000564850 TXNRD3Q86VQ6 643 aa7.45□□□□□ -1.22
RBFOX1-216ENST00000564850 ZSCAN10Q96SZ4 725 aaPredicted RBP7.45□□□□□ -1.22
RBFOX1-216ENST00000564850 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
RBFOX1-216ENST00000564850 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
RBFOX1-216ENST00000564850 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
RBFOX1-216ENST00000564850 CD33P20138 364 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 ALAS2P22557 587 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 JAG1P78504 1218 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 FAM182BQ5T319 152 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 PNMA1Q8ND90 353 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
RBFOX1-216ENST00000564850 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 CENPCQ03188 943 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 CNKSR1Q969H4 720 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ESYT1Q9BSJ8 1104 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
RBFOX1-216ENST00000564850 ATXN7O15265 892 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 GIGYF1O75420 1035 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 AMER1Q5JTC6 1135 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 CCDC125Q86Z20 511 aa7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 PARP9Q8IXQ6 854 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms