RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 APLP1P51693 650 aa20.23■□□□□ 0.83
VAC14-206ENST00000564685 ATG3Q9NT62 314 aa20.23■□□□□ 0.83
VAC14-206ENST00000564685 TGFB2P61812 414 aa20.22■□□□□ 0.83
VAC14-206ENST00000564685 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
VAC14-206ENST00000564685 NLGN1Q8N2Q7 840 aa20.22■□□□□ 0.83
VAC14-206ENST00000564685 BCS1LQ9Y276 419 aa20.22■□□□□ 0.83
VAC14-206ENST00000564685 PXDNLA1KZ92 1463 aa20.22■□□□□ 0.83
VAC14-206ENST00000564685 N4BP2Q86UW6 1770 aaPredicted RBP20.21■□□□□ 0.83
VAC14-206ENST00000564685 KIF13BQ9NQT8 1826 aa20.21■□□□□ 0.83
VAC14-206ENST00000564685 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
VAC14-206ENST00000564685 RTCBQ9Y3I0 505 aaKnown RBP20.21■□□□□ 0.83
VAC14-206ENST00000564685 ANKRD26Q9UPS8 1709 aa20.2■□□□□ 0.82
VAC14-206ENST00000564685 TOMM70O94826 608 aa20.2■□□□□ 0.82
VAC14-206ENST00000564685 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
VAC14-206ENST00000564685 KIAA1551Q9HCM1 1747 aa20.19■□□□□ 0.82
VAC14-206ENST00000564685 CCDC87Q9NVE4 849 aa20.18■□□□□ 0.82
VAC14-206ENST00000564685 DPEP1P16444 411 aa20.17■□□□□ 0.82
VAC14-206ENST00000564685 ADRA2BP18089 450 aa20.17■□□□□ 0.82
VAC14-206ENST00000564685 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
VAC14-206ENST00000564685 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
VAC14-206ENST00000564685 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
VAC14-206ENST00000564685 KDRP35968 1356 aa20.17■□□□□ 0.82
VAC14-206ENST00000564685 C10orf71Q711Q0 1435 aa20.17■□□□□ 0.82
VAC14-206ENST00000564685 FCHSD2O94868 740 aa20.16■□□□□ 0.82
VAC14-206ENST00000564685 RFC4P35249 363 aa20.16■□□□□ 0.82
VAC14-206ENST00000564685 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
VAC14-206ENST00000564685 DNAJC5GQ8N7S2 189 aa20.16■□□□□ 0.82
VAC14-206ENST00000564685 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
VAC14-206ENST00000564685 NMRK2Q9NPI5 230 aa20.16■□□□□ 0.82
VAC14-206ENST00000564685 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
VAC14-206ENST00000564685 PARP3Q9Y6F1 533 aa20.15■□□□□ 0.82
VAC14-206ENST00000564685 GYS1P13807 737 aa20.14■□□□□ 0.81
VAC14-206ENST00000564685 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
VAC14-206ENST00000564685 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
VAC14-206ENST00000564685 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
VAC14-206ENST00000564685 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
VAC14-206ENST00000564685 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
VAC14-206ENST00000564685 PLEKHG2Q9H7P9 1386 aa20.12■□□□□ 0.81
VAC14-206ENST00000564685 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
VAC14-206ENST00000564685 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
VAC14-206ENST00000564685 ZNF831Q5JPB2 1677 aa20.12■□□□□ 0.81
VAC14-206ENST00000564685 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
VAC14-206ENST00000564685 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
VAC14-206ENST00000564685 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
VAC14-206ENST00000564685 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
VAC14-206ENST00000564685 CABP4P57796 275 aa20.1■□□□□ 0.81
VAC14-206ENST00000564685 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
VAC14-206ENST00000564685 RBM46Q8TBY0 533 aaKnown RBP20.1■□□□□ 0.81
VAC14-206ENST00000564685 KCNA3P22001 575 aa20.09■□□□□ 0.81
VAC14-206ENST00000564685 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
VAC14-206ENST00000564685 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
VAC14-206ENST00000564685 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
VAC14-206ENST00000564685 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
VAC14-206ENST00000564685 PTCD1O75127 700 aaKnown RBP20.07■□□□□ 0.8
VAC14-206ENST00000564685 DALRD3Q5D0E6 543 aaKnown RBP20.07■□□□□ 0.8
VAC14-206ENST00000564685 WDR90Q96KV7 1748 aa20.07■□□□□ 0.8
VAC14-206ENST00000564685 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
VAC14-206ENST00000564685 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
VAC14-206ENST00000564685 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
VAC14-206ENST00000564685 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
VAC14-206ENST00000564685 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
VAC14-206ENST00000564685 MTHFSP49914 203 aa20.05■□□□□ 0.8
VAC14-206ENST00000564685 FSTL1Q12841 308 aa20.05■□□□□ 0.8
VAC14-206ENST00000564685 FKBP8Q14318 412 aa20.05■□□□□ 0.8
VAC14-206ENST00000564685 SRP68Q9UHB9 627 aaKnown RBP20.05■□□□□ 0.8
VAC14-206ENST00000564685 HTRA3P83110 453 aa20.04■□□□□ 0.8
VAC14-206ENST00000564685 KLRG1Q96E93 195 aa20.04■□□□□ 0.8
VAC14-206ENST00000564685 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
VAC14-206ENST00000564685 DDR1Q08345 913 aa20.03■□□□□ 0.8
VAC14-206ENST00000564685 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.8
VAC14-206ENST00000564685 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
VAC14-206ENST00000564685 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
VAC14-206ENST00000564685 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
VAC14-206ENST00000564685 RRAGCQ9HB90 399 aa20.02■□□□□ 0.8
VAC14-206ENST00000564685 CHRNA5P30532 468 aa20.01■□□□□ 0.79
VAC14-206ENST00000564685 JMYQ8N9B5 988 aa20■□□□□ 0.79
VAC14-206ENST00000564685 SBF1O95248 1867 aa20■□□□□ 0.79
VAC14-206ENST00000564685 AEBP1Q8IUX7 1158 aa19.99■□□□□ 0.79
VAC14-206ENST00000564685 PCNTO95613 3336 aa19.99■□□□□ 0.79
VAC14-206ENST00000564685 INTS5Q6P9B9 1019 aaKnown RBP19.98■□□□□ 0.79
VAC14-206ENST00000564685 POLRMTO00411 1230 aaKnown RBP19.97■□□□□ 0.79
VAC14-206ENST00000564685 ZPR1O75312 459 aa19.97■□□□□ 0.79
VAC14-206ENST00000564685 TM4SF1P30408 202 aa19.97■□□□□ 0.79
VAC14-206ENST00000564685 COL13A1Q5TAT6 717 aaPredicted RBP19.97■□□□□ 0.79
VAC14-206ENST00000564685 TJP1Q07157 1748 aa19.96■□□□□ 0.79
VAC14-206ENST00000564685 SMC1BQ8NDV3 1235 aa19.96■□□□□ 0.79
VAC14-206ENST00000564685 TNRC6CQ9HCJ0 1690 aaKnown RBP19.96■□□□□ 0.79
VAC14-206ENST00000564685 SULT6B1Q6IMI4 303 aa19.95■□□□□ 0.78
VAC14-206ENST00000564685 PANK3Q9H999 370 aa19.95■□□□□ 0.78
VAC14-206ENST00000564685 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
VAC14-206ENST00000564685 DNAJC10Q8IXB1 793 aa19.94■□□□□ 0.78
VAC14-206ENST00000564685 MORC1Q86VD1 984 aa19.93■□□□□ 0.78
VAC14-206ENST00000564685 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
VAC14-206ENST00000564685 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
VAC14-206ENST00000564685 SCN11AQ9UI33 1791 aa19.93■□□□□ 0.78
VAC14-206ENST00000564685 ADAMTS7Q9UKP4 1686 aa19.92■□□□□ 0.78
VAC14-206ENST00000564685 RASSF7Q02833 373 aa19.92■□□□□ 0.78
VAC14-206ENST00000564685 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
VAC14-206ENST00000564685 LMNB1P20700 586 aa19.91■□□□□ 0.78
VAC14-206ENST00000564685 NFIXQ14938 502 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms