RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
KNOP1-202ENST00000564480 MMP10P09238 476 aa19.08■□□□□ 0.64
KNOP1-202ENST00000564480 KDRP35968 1356 aa19.06■□□□□ 0.64
KNOP1-202ENST00000564480 KIF3CO14782 793 aa19.05■□□□□ 0.64
KNOP1-202ENST00000564480 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
KNOP1-202ENST00000564480 HSPA6P17066 643 aa19.04■□□□□ 0.64
KNOP1-202ENST00000564480 IFFO2Q5TF58 517 aa19.04■□□□□ 0.64
KNOP1-202ENST00000564480 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
KNOP1-202ENST00000564480 KIAA1551Q9HCM1 1747 aa19.03■□□□□ 0.64
KNOP1-202ENST00000564480 A0A0G2JLW4 131 aa19.03■□□□□ 0.64
KNOP1-202ENST00000564480 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
KNOP1-202ENST00000564480 TRAPPC3LQ5T215 181 aa19.03■□□□□ 0.64
KNOP1-202ENST00000564480 ARHGEF1Q92888 912 aaKnown RBP19.03■□□□□ 0.64
KNOP1-202ENST00000564480 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
KNOP1-202ENST00000564480 RTCBQ9Y3I0 505 aaKnown RBP19.02■□□□□ 0.64
KNOP1-202ENST00000564480 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
KNOP1-202ENST00000564480 ERVV-2B6SEH9 535 aa19.01■□□□□ 0.63
KNOP1-202ENST00000564480 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
KNOP1-202ENST00000564480 GYS1P13807 737 aa19■□□□□ 0.63
KNOP1-202ENST00000564480 NLGN1Q8N2Q7 840 aa19■□□□□ 0.63
KNOP1-202ENST00000564480 DCAF5Q96JK2 942 aa19■□□□□ 0.63
KNOP1-202ENST00000564480 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 DPEP1P16444 411 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 TGFB2P61812 414 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 RC3H1Q5TC82 1133 aaKnown RBP18.99■□□□□ 0.63
KNOP1-202ENST00000564480 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 BCS1LQ9Y276 419 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
KNOP1-202ENST00000564480 N4BP2Q86UW6 1770 aaPredicted RBP18.98■□□□□ 0.63
KNOP1-202ENST00000564480 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
KNOP1-202ENST00000564480 PANK3Q9H999 370 aa18.98■□□□□ 0.63
KNOP1-202ENST00000564480 CNTNAP4Q9C0A0 1308 aa18.98■□□□□ 0.63
KNOP1-202ENST00000564480 KCNA3P22001 575 aa18.97■□□□□ 0.63
KNOP1-202ENST00000564480 PLEKHO1Q53GL0 409 aaPredicted RBP18.97■□□□□ 0.63
KNOP1-202ENST00000564480 ZNF530Q6P9A1 599 aaPredicted RBP18.97■□□□□ 0.63
KNOP1-202ENST00000564480 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
KNOP1-202ENST00000564480 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
KNOP1-202ENST00000564480 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
KNOP1-202ENST00000564480 CABP4P57796 275 aa18.96■□□□□ 0.63
KNOP1-202ENST00000564480 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
KNOP1-202ENST00000564480 MYH14Q7Z406 1995 aaKnown RBP18.95■□□□□ 0.62
KNOP1-202ENST00000564480 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
KNOP1-202ENST00000564480 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
KNOP1-202ENST00000564480 ADRA2BP18089 450 aa18.95■□□□□ 0.62
KNOP1-202ENST00000564480 RFC4P35249 363 aa18.95■□□□□ 0.62
KNOP1-202ENST00000564480 ARHGAP27Q6ZUM4 889 aa18.95■□□□□ 0.62
KNOP1-202ENST00000564480 SRP68Q9UHB9 627 aaKnown RBP18.95■□□□□ 0.62
KNOP1-202ENST00000564480 NFATC2IPQ8NCF5 419 aa18.94■□□□□ 0.62
KNOP1-202ENST00000564480 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
KNOP1-202ENST00000564480 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
KNOP1-202ENST00000564480 MTHFSP49914 203 aa18.93■□□□□ 0.62
KNOP1-202ENST00000564480 NMRK2Q9NPI5 230 aa18.93■□□□□ 0.62
KNOP1-202ENST00000564480 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
KNOP1-202ENST00000564480 FCHSD2O94868 740 aa18.92■□□□□ 0.62
KNOP1-202ENST00000564480 CRKLP46109 303 aaKnown RBP18.92■□□□□ 0.62
KNOP1-202ENST00000564480 DDR1Q08345 913 aa18.92■□□□□ 0.62
KNOP1-202ENST00000564480 FKBP8Q14318 412 aa18.92■□□□□ 0.62
KNOP1-202ENST00000564480 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
KNOP1-202ENST00000564480 PARP3Q9Y6F1 533 aa18.92■□□□□ 0.62
KNOP1-202ENST00000564480 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
KNOP1-202ENST00000564480 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
KNOP1-202ENST00000564480 DNAJC5GQ8N7S2 189 aa18.9■□□□□ 0.62
KNOP1-202ENST00000564480 TOMM70O94826 608 aa18.89■□□□□ 0.61
KNOP1-202ENST00000564480 IL13P35225 146 aa18.89■□□□□ 0.61
KNOP1-202ENST00000564480 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
KNOP1-202ENST00000564480 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
KNOP1-202ENST00000564480 USP42Q9H9J4 1324 aaKnown RBP18.89■□□□□ 0.61
KNOP1-202ENST00000564480 BRCA1P38398 1863 aaKnown RBP18.88■□□□□ 0.61
KNOP1-202ENST00000564480 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.61
KNOP1-202ENST00000564480 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
KNOP1-202ENST00000564480 C9orf131Q5VYM1 1079 aa18.88■□□□□ 0.61
KNOP1-202ENST00000564480 CHRNA5P30532 468 aa18.87■□□□□ 0.61
KNOP1-202ENST00000564480 TJP1Q07157 1748 aa18.87■□□□□ 0.61
KNOP1-202ENST00000564480 LGR6Q9HBX8 967 aa18.87■□□□□ 0.61
KNOP1-202ENST00000564480 ADAMTS7Q9UKP4 1686 aa18.86■□□□□ 0.61
KNOP1-202ENST00000564480 TM4SF1P30408 202 aa18.86■□□□□ 0.61
KNOP1-202ENST00000564480 DNAJC10Q8IXB1 793 aa18.86■□□□□ 0.61
KNOP1-202ENST00000564480 PIM2Q9P1W9 311 aa18.86■□□□□ 0.61
KNOP1-202ENST00000564480 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
KNOP1-202ENST00000564480 APLP1P51693 650 aa18.85■□□□□ 0.61
KNOP1-202ENST00000564480 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
KNOP1-202ENST00000564480 HTRA3P83110 453 aa18.83■□□□□ 0.6
KNOP1-202ENST00000564480 SLC39A6Q13433 755 aa18.83■□□□□ 0.6
KNOP1-202ENST00000564480 DALRD3Q5D0E6 543 aaKnown RBP18.83■□□□□ 0.6
KNOP1-202ENST00000564480 USPL1Q5W0Q7 1092 aa18.83■□□□□ 0.6
KNOP1-202ENST00000564480 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
KNOP1-202ENST00000564480 ARFGEF1Q9Y6D6 1849 aa18.81■□□□□ 0.6
KNOP1-202ENST00000564480 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
KNOP1-202ENST00000564480 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
KNOP1-202ENST00000564480 KCPQ6ZWJ8 1503 aa18.81■□□□□ 0.6
KNOP1-202ENST00000564480 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
KNOP1-202ENST00000564480 AKAP4Q5JQC9 854 aa18.81■□□□□ 0.6
KNOP1-202ENST00000564480 AMER1Q5JTC6 1135 aaPredicted RBP18.81■□□□□ 0.6
KNOP1-202ENST00000564480 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
KNOP1-202ENST00000564480 HMOX1P09601 288 aa18.8■□□□□ 0.6
KNOP1-202ENST00000564480 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
KNOP1-202ENST00000564480 BCL2L12Q9HB09 334 aa18.8■□□□□ 0.6
KNOP1-202ENST00000564480 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
KNOP1-202ENST00000564480 PRELPP51888 382 aa18.79■□□□□ 0.6
KNOP1-202ENST00000564480 NFIXQ14938 502 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms