RNA–Protein interactions for RNA: ENST00000563545.1

CHTF18-214, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 5

Gene CHTF18, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-214ENST00000563545 HSP90AB1P08238 724 aaKnown RBP30.38■■■□□ 2.45
CHTF18-214ENST00000563545 SSFA2P28290 1259 aa30.38■■■□□ 2.45
CHTF18-214ENST00000563545 ZNF530Q6P9A1 599 aaPredicted RBP30.38■■■□□ 2.45
CHTF18-214ENST00000563545 AMOTQ4VCS5 1084 aa30.37■■■□□ 2.45
CHTF18-214ENST00000563545 AEBP1Q8IUX7 1158 aa30.37■■■□□ 2.45
CHTF18-214ENST00000563545 DCAF5Q96JK2 942 aa30.37■■■□□ 2.45
CHTF18-214ENST00000563545 KIF7Q2M1P5 1343 aa30.37■■■□□ 2.45
CHTF18-214ENST00000563545 AMER1Q5JTC6 1135 aaPredicted RBP30.35■■■□□ 2.45
CHTF18-214ENST00000563545 CD2APQ9Y5K6 639 aa30.35■■■□□ 2.45
CHTF18-214ENST00000563545 KDM6AO15550 1401 aaPredicted RBP30.34■■■□□ 2.45
CHTF18-214ENST00000563545 GNPATO15228 680 aa30.34■■■□□ 2.45
CHTF18-214ENST00000563545 KDRP35968 1356 aa30.33■■■□□ 2.45
CHTF18-214ENST00000563545 YBX3P16989 372 aaKnown RBP eCLIP30.33■■■□□ 2.45
CHTF18-214ENST00000563545 SULT6B1Q6IMI4 303 aa30.32■■■□□ 2.44
CHTF18-214ENST00000563545 ZNF831Q5JPB2 1677 aa30.32■■■□□ 2.44
CHTF18-214ENST00000563545 IL13P35225 146 aa30.31■■■□□ 2.44
CHTF18-214ENST00000563545 RBM42Q9BTD8 480 aaKnown RBP30.31■■■□□ 2.44
CHTF18-214ENST00000563545 GRIN3BO60391 1043 aa30.3■■■□□ 2.44
CHTF18-214ENST00000563545 CABP4P57796 275 aa30.3■■■□□ 2.44
CHTF18-214ENST00000563545 C1orf141Q5JVX7 400 aa30.3■■■□□ 2.44
CHTF18-214ENST00000563545 SLC4A9Q96Q91 983 aa30.3■■■□□ 2.44
CHTF18-214ENST00000563545 MTHFSP49914 203 aa30.28■■■□□ 2.44
CHTF18-214ENST00000563545 COL5A3P25940 1745 aaPredicted RBP30.27■■■□□ 2.44
CHTF18-214ENST00000563545 SCN11AQ9UI33 1791 aa30.25■■■□□ 2.43
CHTF18-214ENST00000563545 RTCBQ9Y3I0 505 aaKnown RBP30.24■■■□□ 2.43
CHTF18-214ENST00000563545 MYH14Q7Z406 1995 aaKnown RBP30.23■■■□□ 2.43
CHTF18-214ENST00000563545 PER1O15534 1290 aaPredicted RBP30.23■■■□□ 2.43
CHTF18-214ENST00000563545 RC3H1Q5TC82 1133 aaKnown RBP30.22■■■□□ 2.43
CHTF18-214ENST00000563545 TRAPPC3LQ5T215 181 aa30.21■■■□□ 2.43
CHTF18-214ENST00000563545 NFATC2IPQ8NCF5 419 aa30.21■■■□□ 2.43
CHTF18-214ENST00000563545 CNTNAP4Q9C0A0 1308 aa30.21■■■□□ 2.43
CHTF18-214ENST00000563545 CC2D1BQ5T0F9 858 aaKnown RBP30.2■■■□□ 2.43
CHTF18-214ENST00000563545 PTCD1O75127 700 aaKnown RBP30.19■■■□□ 2.42
CHTF18-214ENST00000563545 VIRMAQ69YN4 1812 aaKnown RBP30.19■■■□□ 2.42
CHTF18-214ENST00000563545 MMP10P09238 476 aa30.18■■■□□ 2.42
CHTF18-214ENST00000563545 RPS6KA4O75676 772 aa30.17■■■□□ 2.42
CHTF18-214ENST00000563545 ADRA2BP18089 450 aa30.17■■■□□ 2.42
CHTF18-214ENST00000563545 AKAP4Q5JQC9 854 aa30.17■■■□□ 2.42
CHTF18-214ENST00000563545 ARHGEF1Q92888 912 aaKnown RBP30.17■■■□□ 2.42
CHTF18-214ENST00000563545 HMOX1P09601 288 aa30.16■■■□□ 2.42
CHTF18-214ENST00000563545 WWC3Q9ULE0 1092 aa30.15■■■□□ 2.42
CHTF18-214ENST00000563545 C4AP0C0L4 1744 aa30.15■■■□□ 2.42
CHTF18-214ENST00000563545 KIF13BQ9NQT8 1826 aa30.15■■■□□ 2.42
CHTF18-214ENST00000563545 TJP1Q07157 1748 aa30.14■■■□□ 2.42
CHTF18-214ENST00000563545 NLGN1Q8N2Q7 840 aa30.14■■■□□ 2.42
CHTF18-214ENST00000563545 DIAPH1O60610 1272 aaKnown RBP30.13■■■□□ 2.41
CHTF18-214ENST00000563545 RFC4P35249 363 aa30.13■■■□□ 2.41
CHTF18-214ENST00000563545 C1QTNF8P60827 252 aa30.13■■■□□ 2.41
CHTF18-214ENST00000563545 CICQ96RK0 1608 aaPredicted RBP30.12■■■□□ 2.41
CHTF18-214ENST00000563545 CRKLP46109 303 aaKnown RBP30.12■■■□□ 2.41
CHTF18-214ENST00000563545 LGR6Q9HBX8 967 aa30.12■■■□□ 2.41
CHTF18-214ENST00000563545 GYS1P13807 737 aa30.11■■■□□ 2.41
CHTF18-214ENST00000563545 SLC52A2Q9HAB3 445 aa30.11■■■□□ 2.41
CHTF18-214ENST00000563545 GIGYF1O75420 1035 aaPredicted RBP30.1■■■□□ 2.41
CHTF18-214ENST00000563545 RNMTO43148 476 aaKnown RBP30.09■■■□□ 2.41
CHTF18-214ENST00000563545 CNGB1Q14028 1251 aaPredicted RBP30.09■■■□□ 2.41
CHTF18-214ENST00000563545 N4BP2Q86UW6 1770 aaPredicted RBP30.09■■■□□ 2.41
CHTF18-214ENST00000563545 KIAA1551Q9HCM1 1747 aa30.09■■■□□ 2.41
CHTF18-214ENST00000563545 NPC1L1Q9UHC9 1359 aa30.09■■■□□ 2.41
CHTF18-214ENST00000563545 MRC1P22897 1456 aa30.08■■■□□ 2.41
CHTF18-214ENST00000563545 MTHFSDQ2M296 383 aaKnown RBP30.07■■■□□ 2.4
CHTF18-214ENST00000563545 PXDNLA1KZ92 1463 aa30.06■■■□□ 2.4
CHTF18-214ENST00000563545 ATP10DQ9P241 1426 aa30.06■■■□□ 2.4
CHTF18-214ENST00000563545 C10orf71Q711Q0 1435 aa30.05■■■□□ 2.4
CHTF18-214ENST00000563545 ADAMTS7Q9UKP4 1686 aa30.05■■■□□ 2.4
CHTF18-214ENST00000563545 COL3A1P02461 1466 aaPredicted RBP30.05■■■□□ 2.4
CHTF18-214ENST00000563545 CCDC87Q9NVE4 849 aa30.04■■■□□ 2.4
CHTF18-214ENST00000563545 PARP3Q9Y6F1 533 aa30.04■■■□□ 2.4
CHTF18-214ENST00000563545 TGFB2P61812 414 aa30.03■■■□□ 2.4
CHTF18-214ENST00000563545 SLC39A6Q13433 755 aa30.03■■■□□ 2.4
CHTF18-214ENST00000563545 INTS5Q6P9B9 1019 aaKnown RBP30.03■■■□□ 2.4
CHTF18-214ENST00000563545 DNAJC10Q8IXB1 793 aa30.03■■■□□ 2.4
CHTF18-214ENST00000563545 SRP68Q9UHB9 627 aaKnown RBP30.03■■■□□ 2.4
CHTF18-214ENST00000563545 SENP3-EIF4A1A0A087X0R7 540 aa30.02■■■□□ 2.4
CHTF18-214ENST00000563545 ADCY9O60503 1353 aa30.02■■■□□ 2.4
CHTF18-214ENST00000563545 USP42Q9H9J4 1324 aaKnown RBP30.01■■■□□ 2.4
CHTF18-214ENST00000563545 A0A0G2JLW4 131 aa30■■■□□ 2.39
CHTF18-214ENST00000563545 U2SURPO15042 1029 aaKnown RBP30■■■□□ 2.39
CHTF18-214ENST00000563545 KCPQ6ZWJ8 1503 aa30■■■□□ 2.39
CHTF18-214ENST00000563545 FKBP8Q14318 412 aa29.98■■■□□ 2.39
CHTF18-214ENST00000563545 BRCA1P38398 1863 aaKnown RBP29.97■■■□□ 2.39
CHTF18-214ENST00000563545 UBR2Q8IWV8 1755 aa29.96■■■□□ 2.39
CHTF18-214ENST00000563545 CYP19A1P11511 503 aaPredicted RBP29.96■■■□□ 2.39
CHTF18-214ENST00000563545 DPEP1P16444 411 aa29.96■■■□□ 2.39
CHTF18-214ENST00000563545 BCS1LQ9Y276 419 aa29.96■■■□□ 2.39
CHTF18-214ENST00000563545 GPBP1L1Q9HC44 474 aaPredicted RBP29.95■■■□□ 2.39
CHTF18-214ENST00000563545 SOS1Q07889 1333 aaPredicted RBP29.95■■■□□ 2.38
CHTF18-214ENST00000563545 DDR1Q08345 913 aa29.94■■■□□ 2.38
CHTF18-214ENST00000563545 ZNF526Q8TF50 670 aaPredicted RBP29.94■■■□□ 2.38
CHTF18-214ENST00000563545 ZPR1O75312 459 aa29.92■■■□□ 2.38
CHTF18-214ENST00000563545 VSIG10Q8N0Z9 540 aa29.92■■■□□ 2.38
CHTF18-214ENST00000563545 GAS2L2Q8NHY3 880 aa29.92■■■□□ 2.38
CHTF18-214ENST00000563545 USPL1Q5W0Q7 1092 aa29.91■■■□□ 2.38
CHTF18-214ENST00000563545 ZBTB1Q9Y2K1 713 aa29.91■■■□□ 2.38
CHTF18-214ENST00000563545 GNAT3A8MTJ3 354 aa29.9■■■□□ 2.38
CHTF18-214ENST00000563545 SIPA1L3O60292 1781 aaPredicted RBP29.9■■■□□ 2.38
CHTF18-214ENST00000563545 COL15A1P39059 1388 aa29.9■■■□□ 2.38
CHTF18-214ENST00000563545 ARFGEF1Q9Y6D6 1849 aa29.89■■■□□ 2.38
CHTF18-214ENST00000563545 FCHSD2O94868 740 aa29.89■■■□□ 2.38
CHTF18-214ENST00000563545 KCNA3P22001 575 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms