RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 DUSP27Q5VZP5 1158 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 CCDC174Q6PII3 467 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 NYAP1Q6ZVC0 841 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 SEZ6LQ9BYH1 1024 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 IFT122Q9HBG6 1241 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 LZTS1Q9Y250 596 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 LMNB1P20700 586 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 SSTR3P32745 418 aaPredicted RBP5.94□□□□□ -1.46
SMG1-207ENST00000563235 MAN1A1P33908 653 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 PODNQ7Z5L7 613 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 SLC43A3Q8NBI5 491 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 ANO2Q9NQ90 1003 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 BAZ1BQ9UIG0 1483 aaKnown RBP5.94□□□□□ -1.46
SMG1-207ENST00000563235 CHD1O14646 1710 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 RRP9O43818 475 aaKnown RBP5.94□□□□□ -1.46
SMG1-207ENST00000563235 MAPRE1Q15691 268 aaKnown RBP5.94□□□□□ -1.46
SMG1-207ENST00000563235 ALDH1L2Q3SY69 923 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 CCDC93Q567U6 631 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 ALDH8A1Q9H2A2 487 aaPredicted RBP5.94□□□□□ -1.46
SMG1-207ENST00000563235 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 PCDH10Q9P2E7 1040 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 PRDM4Q9UKN5 801 aa5.94□□□□□ -1.46
SMG1-207ENST00000563235 PRSS47A8MTI9 375 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 PPP1R3GB7ZBB8 358 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 FANCCQ00597 558 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 MDM2Q00987 491 aaPredicted RBP5.93□□□□□ -1.46
SMG1-207ENST00000563235 ARMC3Q5W041 872 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 RPAINQ86UA6 219 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 ZSCAN30Q86W11 494 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 SUGP1Q8IWZ8 645 aaKnown RBP5.93□□□□□ -1.46
SMG1-207ENST00000563235 ARMC5Q96C12 935 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 GMLQ99445 158 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 LIMD1Q9UGP4 676 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 KDM4FA0A1W2PPD8 638 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 CBFA2T2O43439 604 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 RGS20O76081 388 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
SMG1-207ENST00000563235 LRRC41Q15345 812 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 HSCBQ8IWL3 235 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 MS4A3Q96HJ5 214 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 ALG2Q9H553 416 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 PPCSQ9HAB8 311 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 SYNPO2Q9UMS6 1093 aa5.93□□□□□ -1.46
SMG1-207ENST00000563235 BICDL2A1A5D9 508 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 HSP90AB3PQ58FF7 597 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 TBC1D9Q6ZT07 1266 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 PAF1Q8N7H5 531 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 FBXO22Q8NEZ5 403 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 APBA2Q99767 749 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 CXorf56Q9H5V9 222 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 SMARCA4P51532 1647 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 POTEB2H3BUK9 544 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 RNASEH2AO75792 299 aaKnown RBP5.92□□□□□ -1.46
SMG1-207ENST00000563235 SRGNP10124 158 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 FERMT3Q86UX7 667 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 PRR7Q8TB68 274 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 RUNDC1Q96C34 613 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 PTPRHQ9HD43 1115 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 ENAMQ9NRM1 1142 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 NLRP2Q9NX02 1062 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 CWC25Q9NXE8 425 aaPredicted RBP5.92□□□□□ -1.46
SMG1-207ENST00000563235 GJA3Q9Y6H8 435 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 SMAPO00193 183 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 BPNT1O95861 308 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 TOMM20Q15388 145 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 ZRSR2Q15696 482 aaKnown RBP5.92□□□□□ -1.46
SMG1-207ENST00000563235 L1TD1Q5T7N2 865 aaKnown RBP5.92□□□□□ -1.46
SMG1-207ENST00000563235 TTC30AQ86WT1 665 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 KANSL2Q9H9L4 492 aa5.92□□□□□ -1.46
SMG1-207ENST00000563235 KIF13AQ9H1H9 1805 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 CLASP1Q7Z460 1538 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 PDE4AP27815 886 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 TMEM259Q4ZIN3 620 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 NBPF6Q5VWK0 638 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 NBPF5PQ86XG9 351 aaPredicted RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 SNRNP27Q8WVK2 155 aaKnown RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 FAM212AQ96EL1 285 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 NBPF4Q96M43 638 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 TGIF2Q9GZN2 237 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 ENPP3O14638 875 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 COL6A1P12109 1028 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 PDIA6Q15084 440 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 KANK4Q5T7N3 995 aaPredicted RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 CCSAPQ6IQ19 270 aaPredicted RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 NBPF10Q6P3W6 841 aaKnown RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 ANP32BQ92688 251 aaKnown RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 RETREG1Q9H6L5 497 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 ARNT2Q9HBZ2 717 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 METRNQ9UJH8 293 aa5.91□□□□□ -1.46
SMG1-207ENST00000563235 NOL7Q9UMY1 257 aaKnown RBP5.91□□□□□ -1.46
SMG1-207ENST00000563235 HIC1Q14526 733 aa5.9□□□□□ -1.46
SMG1-207ENST00000563235 CHPFQ8IZ52 775 aa5.9□□□□□ -1.46
SMG1-207ENST00000563235 PGBD3Q8N328 593 aa5.9□□□□□ -1.46
SMG1-207ENST00000563235 PRPF38AQ8NAV1 312 aaKnown RBP5.9□□□□□ -1.46
SMG1-207ENST00000563235 AGBL1Q96MI9 1066 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms