RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 CNGB1Q14028 1251 aaPredicted RBP22.8■■□□□ 1.24
TNRC6A-209ENST00000562829 ATG3Q9NT62 314 aa22.8■■□□□ 1.24
TNRC6A-209ENST00000562829 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
TNRC6A-209ENST00000562829 MTHFSP49914 203 aa22.79■■□□□ 1.24
TNRC6A-209ENST00000562829 CABP4P57796 275 aa22.79■■□□□ 1.24
TNRC6A-209ENST00000562829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.78■■□□□ 1.24
TNRC6A-209ENST00000562829 KDM6AO15550 1401 aaPredicted RBP22.78■■□□□ 1.24
TNRC6A-209ENST00000562829 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
TNRC6A-209ENST00000562829 AMIGO3Q86WK7 504 aa22.78■■□□□ 1.24
TNRC6A-209ENST00000562829 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
TNRC6A-209ENST00000562829 GNPATO15228 680 aa22.77■■□□□ 1.24
TNRC6A-209ENST00000562829 PER1O15534 1290 aaPredicted RBP22.77■■□□□ 1.24
TNRC6A-209ENST00000562829 ITPK1Q13572 414 aa22.77■■□□□ 1.24
TNRC6A-209ENST00000562829 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.24
TNRC6A-209ENST00000562829 KDRP35968 1356 aa22.76■■□□□ 1.23
TNRC6A-209ENST00000562829 SSFA2P28290 1259 aa22.76■■□□□ 1.23
TNRC6A-209ENST00000562829 CHD4Q14839 1912 aa22.75■■□□□ 1.23
TNRC6A-209ENST00000562829 HMOX1P09601 288 aa22.73■■□□□ 1.23
TNRC6A-209ENST00000562829 DIAPH1O60610 1272 aaKnown RBP22.71■■□□□ 1.23
TNRC6A-209ENST00000562829 SLC4A9Q96Q91 983 aa22.7■■□□□ 1.22
TNRC6A-209ENST00000562829 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
TNRC6A-209ENST00000562829 AKAP4Q5JQC9 854 aa22.69■■□□□ 1.22
TNRC6A-209ENST00000562829 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
TNRC6A-209ENST00000562829 RTCBQ9Y3I0 505 aaKnown RBP22.69■■□□□ 1.22
TNRC6A-209ENST00000562829 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
TNRC6A-209ENST00000562829 ZNF831Q5JPB2 1677 aa22.68■■□□□ 1.22
TNRC6A-209ENST00000562829 NPC1L1Q9UHC9 1359 aa22.68■■□□□ 1.22
TNRC6A-209ENST00000562829 CD2APQ9Y5K6 639 aa22.68■■□□□ 1.22
TNRC6A-209ENST00000562829 COL5A3P25940 1745 aaPredicted RBP22.67■■□□□ 1.22
TNRC6A-209ENST00000562829 UTRNP46939 3433 aa22.66■■□□□ 1.22
TNRC6A-209ENST00000562829 TRAPPC3LQ5T215 181 aa22.66■■□□□ 1.22
TNRC6A-209ENST00000562829 ZNF784Q8NCA9 323 aaPredicted RBP22.66■■□□□ 1.22
TNRC6A-209ENST00000562829 CNTNAP4Q9C0A0 1308 aa22.65■■□□□ 1.22
TNRC6A-209ENST00000562829 U2SURPO15042 1029 aaKnown RBP22.65■■□□□ 1.22
TNRC6A-209ENST00000562829 YBX3P16989 372 aaKnown RBP eCLIP22.64■■□□□ 1.21
TNRC6A-209ENST00000562829 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.21
TNRC6A-209ENST00000562829 GRIN3BO60391 1043 aa22.63■■□□□ 1.21
TNRC6A-209ENST00000562829 VIRMAQ69YN4 1812 aaKnown RBP22.63■■□□□ 1.21
TNRC6A-209ENST00000562829 COL3A1P02461 1466 aaPredicted RBP22.62■■□□□ 1.21
TNRC6A-209ENST00000562829 ADRA2BP18089 450 aa22.62■■□□□ 1.21
TNRC6A-209ENST00000562829 MTHFSDQ2M296 383 aaKnown RBP22.62■■□□□ 1.21
TNRC6A-209ENST00000562829 SLC52A2Q9HAB3 445 aa22.62■■□□□ 1.21
TNRC6A-209ENST00000562829 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
TNRC6A-209ENST00000562829 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
TNRC6A-209ENST00000562829 RPS6KA4O75676 772 aa22.61■■□□□ 1.21
TNRC6A-209ENST00000562829 MMP10P09238 476 aa22.61■■□□□ 1.21
TNRC6A-209ENST00000562829 RFC4P35249 363 aa22.61■■□□□ 1.21
TNRC6A-209ENST00000562829 ARHGEF1Q92888 912 aaKnown RBP22.61■■□□□ 1.21
TNRC6A-209ENST00000562829 TJP1Q07157 1748 aa22.6■■□□□ 1.21
TNRC6A-209ENST00000562829 MYH14Q7Z406 1995 aaKnown RBP22.6■■□□□ 1.21
TNRC6A-209ENST00000562829 CRKLP46109 303 aaKnown RBP22.6■■□□□ 1.21
TNRC6A-209ENST00000562829 WWC3Q9ULE0 1092 aa22.59■■□□□ 1.21
TNRC6A-209ENST00000562829 MRC1P22897 1456 aa22.59■■□□□ 1.21
TNRC6A-209ENST00000562829 C4AP0C0L4 1744 aa22.58■■□□□ 1.21
TNRC6A-209ENST00000562829 NLGN1Q8N2Q7 840 aa22.58■■□□□ 1.21
TNRC6A-209ENST00000562829 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
TNRC6A-209ENST00000562829 SLC39A6Q13433 755 aa22.57■■□□□ 1.2
TNRC6A-209ENST00000562829 CICQ96RK0 1608 aaPredicted RBP22.57■■□□□ 1.2
TNRC6A-209ENST00000562829 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
TNRC6A-209ENST00000562829 GYS1P13807 737 aa22.55■■□□□ 1.2
TNRC6A-209ENST00000562829 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
TNRC6A-209ENST00000562829 GAS2L2Q8NHY3 880 aa22.54■■□□□ 1.2
TNRC6A-209ENST00000562829 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
TNRC6A-209ENST00000562829 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
TNRC6A-209ENST00000562829 CCDC87Q9NVE4 849 aa22.52■■□□□ 1.2
TNRC6A-209ENST00000562829 SRP68Q9UHB9 627 aaKnown RBP22.52■■□□□ 1.2
TNRC6A-209ENST00000562829 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.19
TNRC6A-209ENST00000562829 GNAT3A8MTJ3 354 aa22.51■■□□□ 1.19
TNRC6A-209ENST00000562829 INTS5Q6P9B9 1019 aaKnown RBP22.51■■□□□ 1.19
TNRC6A-209ENST00000562829 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
TNRC6A-209ENST00000562829 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
TNRC6A-209ENST00000562829 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
TNRC6A-209ENST00000562829 TEFQ10587 303 aa22.5■■□□□ 1.19
TNRC6A-209ENST00000562829 USP42Q9H9J4 1324 aaKnown RBP22.5■■□□□ 1.19
TNRC6A-209ENST00000562829 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
TNRC6A-209ENST00000562829 C10orf71Q711Q0 1435 aa22.49■■□□□ 1.19
TNRC6A-209ENST00000562829 PPP2R1AP30153 589 aa22.49■■□□□ 1.19
TNRC6A-209ENST00000562829 PXDNLA1KZ92 1463 aa22.48■■□□□ 1.19
TNRC6A-209ENST00000562829 N4BP2Q86UW6 1770 aaPredicted RBP22.48■■□□□ 1.19
TNRC6A-209ENST00000562829 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
TNRC6A-209ENST00000562829 ZPR1O75312 459 aa22.47■■□□□ 1.19
TNRC6A-209ENST00000562829 U2AF1L5P0DN76 240 aaPredicted RBP22.47■■□□□ 1.19
TNRC6A-209ENST00000562829 U2AF1Q01081 240 aaKnown RBP eCLIP22.47■■□□□ 1.198e-10■■■□□ 14.8
TNRC6A-209ENST00000562829 FKBP8Q14318 412 aa22.47■■□□□ 1.19
TNRC6A-209ENST00000562829 RSPH6AQ9H0K4 717 aa22.47■■□□□ 1.19
TNRC6A-209ENST00000562829 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
TNRC6A-209ENST00000562829 TGFB2P61812 414 aa22.46■■□□□ 1.19
TNRC6A-209ENST00000562829 VSIG10Q8N0Z9 540 aa22.46■■□□□ 1.19
TNRC6A-209ENST00000562829 IL17REQ8NFR9 667 aa22.46■■□□□ 1.19
TNRC6A-209ENST00000562829 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
TNRC6A-209ENST00000562829 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
TNRC6A-209ENST00000562829 GIGYF1O75420 1035 aaPredicted RBP22.45■■□□□ 1.18
TNRC6A-209ENST00000562829 ZBTB1Q9Y2K1 713 aa22.45■■□□□ 1.18
TNRC6A-209ENST00000562829 KIAA1551Q9HCM1 1747 aa22.45■■□□□ 1.18
TNRC6A-209ENST00000562829 COL15A1P39059 1388 aa22.44■■□□□ 1.18
TNRC6A-209ENST00000562829 USPL1Q5W0Q7 1092 aa22.44■■□□□ 1.18
TNRC6A-209ENST00000562829 PHACTR3Q96KR7 559 aa22.44■■□□□ 1.18
TNRC6A-209ENST00000562829 ATP10DQ9P241 1426 aa22.44■■□□□ 1.18
TNRC6A-209ENST00000562829 BCS1LQ9Y276 419 aa22.44■■□□□ 1.18
TNRC6A-209ENST00000562829 DPEP1P16444 411 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms