RNA–Protein interactions for RNA: ENST00000562492.5

IRF8-202, Transcript of interferon regulatory factor 8, humanhuman

TSL 3 BASIC

Gene IRF8, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-202ENST00000562492 COL23A1Q86Y22 540 aaPredicted RBP23.61■■□□□ 1.37
IRF8-202ENST00000562492 SYT17Q9BSW7 474 aa23.61■■□□□ 1.37
IRF8-202ENST00000562492 C4BP0C0L5 1744 aa23.61■■□□□ 1.37
IRF8-202ENST00000562492 KDM6AO15550 1401 aaPredicted RBP23.6■■□□□ 1.37
IRF8-202ENST00000562492 RBM42Q9BTD8 480 aaKnown RBP23.6■■□□□ 1.37
IRF8-202ENST00000562492 NUDCQ9Y266 331 aa23.6■■□□□ 1.37
IRF8-202ENST00000562492 SSFA2P28290 1259 aa23.59■■□□□ 1.37
IRF8-202ENST00000562492 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
IRF8-202ENST00000562492 KLHL34Q8N239 644 aa23.58■■□□□ 1.37
IRF8-202ENST00000562492 PHF14O94880 888 aa23.56■■□□□ 1.36
IRF8-202ENST00000562492 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
IRF8-202ENST00000562492 LINC00116Q8NCU8 138 aa23.56■■□□□ 1.36
IRF8-202ENST00000562492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
IRF8-202ENST00000562492 GNPATO15228 680 aa23.55■■□□□ 1.36
IRF8-202ENST00000562492 GAS2L2Q8NHY3 880 aa23.55■■□□□ 1.36
IRF8-202ENST00000562492 ITPK1Q13572 414 aa23.54■■□□□ 1.36
IRF8-202ENST00000562492 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
IRF8-202ENST00000562492 RTCBQ9Y3I0 505 aaKnown RBP23.53■■□□□ 1.36
IRF8-202ENST00000562492 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
IRF8-202ENST00000562492 ZNF831Q5JPB2 1677 aa23.52■■□□□ 1.36
IRF8-202ENST00000562492 PPP2R1AP30153 589 aa23.52■■□□□ 1.36
IRF8-202ENST00000562492 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.36
IRF8-202ENST00000562492 MSL1Q68DK7 614 aa23.52■■□□□ 1.36
IRF8-202ENST00000562492 SLC52A2Q9HAB3 445 aa23.52■■□□□ 1.36
IRF8-202ENST00000562492 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
IRF8-202ENST00000562492 RNMTO43148 476 aaKnown RBP23.51■■□□□ 1.35
IRF8-202ENST00000562492 PTCD1O75127 700 aaKnown RBP23.51■■□□□ 1.35
IRF8-202ENST00000562492 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
IRF8-202ENST00000562492 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
IRF8-202ENST00000562492 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
IRF8-202ENST00000562492 ADRA2BP18089 450 aa23.49■■□□□ 1.35
IRF8-202ENST00000562492 TRAPPC3LQ5T215 181 aa23.49■■□□□ 1.35
IRF8-202ENST00000562492 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
IRF8-202ENST00000562492 GNAT3A8MTJ3 354 aa23.47■■□□□ 1.35
IRF8-202ENST00000562492 U2AF1L5P0DN76 240 aaPredicted RBP23.47■■□□□ 1.35
IRF8-202ENST00000562492 YY1P25490 414 aa23.47■■□□□ 1.35
IRF8-202ENST00000562492 U2AF1Q01081 240 aaKnown RBP eCLIP23.47■■□□□ 1.35
IRF8-202ENST00000562492 NEFMP07197 916 aa23.46■■□□□ 1.35
IRF8-202ENST00000562492 MRC1P22897 1456 aa23.46■■□□□ 1.35
IRF8-202ENST00000562492 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
IRF8-202ENST00000562492 TEFQ10587 303 aa23.46■■□□□ 1.35
IRF8-202ENST00000562492 GPR162Q16538 588 aa23.46■■□□□ 1.35
IRF8-202ENST00000562492 SLC4A9Q96Q91 983 aa23.46■■□□□ 1.35
IRF8-202ENST00000562492 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
IRF8-202ENST00000562492 PRKAR2BP31323 418 aa23.45■■□□□ 1.34
IRF8-202ENST00000562492 RFC4P35249 363 aa23.44■■□□□ 1.34
IRF8-202ENST00000562492 TTC5Q8N0Z6 440 aa23.44■■□□□ 1.34
IRF8-202ENST00000562492 CD2APQ9Y5K6 639 aa23.44■■□□□ 1.34
IRF8-202ENST00000562492 FCHSD2O94868 740 aa23.43■■□□□ 1.34
IRF8-202ENST00000562492 AMIGO3Q86WK7 504 aa23.43■■□□□ 1.34
IRF8-202ENST00000562492 NLGN1Q8N2Q7 840 aa23.43■■□□□ 1.34
IRF8-202ENST00000562492 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
IRF8-202ENST00000562492 RSPH6AQ9H0K4 717 aa23.42■■□□□ 1.34
IRF8-202ENST00000562492 COL5A3P25940 1745 aaPredicted RBP23.42■■□□□ 1.34
IRF8-202ENST00000562492 CRKLP46109 303 aaKnown RBP23.41■■□□□ 1.34
IRF8-202ENST00000562492 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
IRF8-202ENST00000562492 SMIM5Q71RC9 77 aa23.4■■□□□ 1.34
IRF8-202ENST00000562492 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
IRF8-202ENST00000562492 ADAMTS7Q9UKP4 1686 aa23.4■■□□□ 1.34
IRF8-202ENST00000562492 VIRMAQ69YN4 1812 aaKnown RBP23.4■■□□□ 1.34
IRF8-202ENST00000562492 SLC39A6Q13433 755 aa23.39■■□□□ 1.33
IRF8-202ENST00000562492 ARHGEF1Q92888 912 aaKnown RBP23.39■■□□□ 1.33
IRF8-202ENST00000562492 CICQ96RK0 1608 aaPredicted RBP23.38■■□□□ 1.33
IRF8-202ENST00000562492 RALBP1Q15311 655 aa23.38■■□□□ 1.33
IRF8-202ENST00000562492 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
IRF8-202ENST00000562492 PNNQ9H307 717 aaKnown RBP23.38■■□□□ 1.33
IRF8-202ENST00000562492 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
IRF8-202ENST00000562492 CCDC87Q9NVE4 849 aa23.37■■□□□ 1.33
IRF8-202ENST00000562492 GRIN3BO60391 1043 aa23.36■■□□□ 1.33
IRF8-202ENST00000562492 MMP10P09238 476 aa23.36■■□□□ 1.33
IRF8-202ENST00000562492 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
IRF8-202ENST00000562492 PHACTR3Q96KR7 559 aa23.36■■□□□ 1.33
IRF8-202ENST00000562492 STARD3NLO95772 234 aa23.35■■□□□ 1.33
IRF8-202ENST00000562492 TEX13AQ9BXU3 409 aaPredicted RBP23.35■■□□□ 1.33
IRF8-202ENST00000562492 TJP1Q07157 1748 aa23.34■■□□□ 1.33
IRF8-202ENST00000562492 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
IRF8-202ENST00000562492 ZPR1O75312 459 aa23.33■■□□□ 1.33
IRF8-202ENST00000562492 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
IRF8-202ENST00000562492 ZNF790Q6PG37 636 aa23.33■■□□□ 1.33
IRF8-202ENST00000562492 PARP3Q9Y6F1 533 aa23.33■■□□□ 1.33
IRF8-202ENST00000562492 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
IRF8-202ENST00000562492 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
IRF8-202ENST00000562492 CYP19A1P11511 503 aaPredicted RBP23.32■■□□□ 1.32
IRF8-202ENST00000562492 GYS1P13807 737 aa23.32■■□□□ 1.32
IRF8-202ENST00000562492 INTS5Q6P9B9 1019 aaKnown RBP23.32■■□□□ 1.32
IRF8-202ENST00000562492 FMNL2Q96PY5 1086 aa23.32■■□□□ 1.32
IRF8-202ENST00000562492 KCPQ6ZWJ8 1503 aa23.32■■□□□ 1.32
IRF8-202ENST00000562492 BTBD11A6QL63 1104 aa23.31■■□□□ 1.32
IRF8-202ENST00000562492 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
IRF8-202ENST00000562492 USP42Q9H9J4 1324 aaKnown RBP23.31■■□□□ 1.32
IRF8-202ENST00000562492 CHD4Q14839 1912 aa23.3■■□□□ 1.32
IRF8-202ENST00000562492 SOS1Q07889 1333 aaPredicted RBP23.29■■□□□ 1.32
IRF8-202ENST00000562492 MAPK8IP3Q9UPT6 1336 aa23.29■■□□□ 1.32
IRF8-202ENST00000562492 HEG1Q9ULI3 1381 aa23.28■■□□□ 1.32
IRF8-202ENST00000562492 UBR2Q8IWV8 1755 aa23.28■■□□□ 1.32
IRF8-202ENST00000562492 ZNF496Q96IT1 587 aaPredicted RBP23.28■■□□□ 1.32
IRF8-202ENST00000562492 A0A087WZG4 1122 aa23.27■■□□□ 1.32
IRF8-202ENST00000562492 C4AP0C0L4 1744 aa23.27■■□□□ 1.32
IRF8-202ENST00000562492 COL15A1P39059 1388 aa23.27■■□□□ 1.31
IRF8-202ENST00000562492 TGFB2P61812 414 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms