RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
SCAMP2-202ENST00000562363 KDRP35968 1356 aa16■□□□□ 0.15
SCAMP2-202ENST00000562363 MMP10P09238 476 aa16■□□□□ 0.15
SCAMP2-202ENST00000562363 ATG3Q9NT62 314 aa16■□□□□ 0.15
SCAMP2-202ENST00000562363 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
SCAMP2-202ENST00000562363 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
SCAMP2-202ENST00000562363 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
SCAMP2-202ENST00000562363 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
SCAMP2-202ENST00000562363 ZNF831Q5JPB2 1677 aa15.98■□□□□ 0.15
SCAMP2-202ENST00000562363 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
SCAMP2-202ENST00000562363 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
SCAMP2-202ENST00000562363 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
SCAMP2-202ENST00000562363 KIF3CO14782 793 aa15.96■□□□□ 0.15
SCAMP2-202ENST00000562363 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
SCAMP2-202ENST00000562363 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
SCAMP2-202ENST00000562363 C4AP0C0L4 1744 aa15.96■□□□□ 0.15
SCAMP2-202ENST00000562363 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
SCAMP2-202ENST00000562363 SLC4A9Q96Q91 983 aa15.95■□□□□ 0.14
SCAMP2-202ENST00000562363 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
SCAMP2-202ENST00000562363 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
SCAMP2-202ENST00000562363 BCS1LQ9Y276 419 aa15.94■□□□□ 0.14
SCAMP2-202ENST00000562363 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
SCAMP2-202ENST00000562363 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
SCAMP2-202ENST00000562363 TGFB2P61812 414 aa15.93■□□□□ 0.14
SCAMP2-202ENST00000562363 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
SCAMP2-202ENST00000562363 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
SCAMP2-202ENST00000562363 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 ADRA2BP18089 450 aa15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 DCAF5Q96JK2 942 aa15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
SCAMP2-202ENST00000562363 BRCA1P38398 1863 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-202ENST00000562363 GYS1P13807 737 aa15.91■□□□□ 0.14
SCAMP2-202ENST00000562363 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-202ENST00000562363 DPEP1P16444 411 aa15.9■□□□□ 0.14
SCAMP2-202ENST00000562363 RFC4P35249 363 aa15.9■□□□□ 0.14
SCAMP2-202ENST00000562363 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-202ENST00000562363 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-202ENST00000562363 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
SCAMP2-202ENST00000562363 RPS6KA4O75676 772 aa15.89■□□□□ 0.13
SCAMP2-202ENST00000562363 FCHSD2O94868 740 aa15.89■□□□□ 0.13
SCAMP2-202ENST00000562363 CABP4P57796 275 aa15.89■□□□□ 0.13
SCAMP2-202ENST00000562363 ARHGAP27Q6ZUM4 889 aa15.89■□□□□ 0.13
SCAMP2-202ENST00000562363 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
SCAMP2-202ENST00000562363 TJP1Q07157 1748 aa15.88■□□□□ 0.13
SCAMP2-202ENST00000562363 TOMM70O94826 608 aa15.88■□□□□ 0.13
SCAMP2-202ENST00000562363 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 APLP1P51693 650 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 NMRK2Q9NPI5 230 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
SCAMP2-202ENST00000562363 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
SCAMP2-202ENST00000562363 CRKLP46109 303 aaKnown RBP15.85■□□□□ 0.13
SCAMP2-202ENST00000562363 MTHFSP49914 203 aa15.85■□□□□ 0.13
SCAMP2-202ENST00000562363 SRP68Q9UHB9 627 aaKnown RBP15.85■□□□□ 0.13
SCAMP2-202ENST00000562363 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
SCAMP2-202ENST00000562363 KCNA3P22001 575 aa15.84■□□□□ 0.13
SCAMP2-202ENST00000562363 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
SCAMP2-202ENST00000562363 PANK3Q9H999 370 aa15.84■□□□□ 0.13
SCAMP2-202ENST00000562363 WDR90Q96KV7 1748 aa15.84■□□□□ 0.13
SCAMP2-202ENST00000562363 ADAMTS7Q9UKP4 1686 aa15.83■□□□□ 0.13
SCAMP2-202ENST00000562363 DDR1Q08345 913 aa15.83■□□□□ 0.12
SCAMP2-202ENST00000562363 FKBP8Q14318 412 aa15.83■□□□□ 0.12
SCAMP2-202ENST00000562363 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
SCAMP2-202ENST00000562363 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
SCAMP2-202ENST00000562363 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
SCAMP2-202ENST00000562363 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
SCAMP2-202ENST00000562363 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
SCAMP2-202ENST00000562363 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-202ENST00000562363 SULT6B1Q6IMI4 303 aa15.81■□□□□ 0.12
SCAMP2-202ENST00000562363 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 CHRNA5P30532 468 aa15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 RBM46Q8TBY0 533 aaKnown RBP15.8■□□□□ 0.12
SCAMP2-202ENST00000562363 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
SCAMP2-202ENST00000562363 RNF181Q9P0P0 153 aa15.79■□□□□ 0.12
SCAMP2-202ENST00000562363 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
SCAMP2-202ENST00000562363 MRC1P22897 1456 aa15.78■□□□□ 0.12
SCAMP2-202ENST00000562363 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
SCAMP2-202ENST00000562363 CLSPNQ9HAW4 1339 aa15.78■□□□□ 0.12
SCAMP2-202ENST00000562363 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
SCAMP2-202ENST00000562363 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
SCAMP2-202ENST00000562363 IL13P35225 146 aa15.77■□□□□ 0.12
SCAMP2-202ENST00000562363 USPL1Q5W0Q7 1092 aa15.77■□□□□ 0.12
SCAMP2-202ENST00000562363 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
SCAMP2-202ENST00000562363 ZPR1O75312 459 aa15.76■□□□□ 0.11
SCAMP2-202ENST00000562363 HTRA3P83110 453 aa15.76■□□□□ 0.11
SCAMP2-202ENST00000562363 AKAP4Q5JQC9 854 aa15.76■□□□□ 0.11
SCAMP2-202ENST00000562363 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
SCAMP2-202ENST00000562363 COL15A1P39059 1388 aa15.75■□□□□ 0.11
SCAMP2-202ENST00000562363 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
SCAMP2-202ENST00000562363 NRXN2Q9P2S2 1712 aa15.75■□□□□ 0.11
SCAMP2-202ENST00000562363 TM4SF1P30408 202 aa15.75■□□□□ 0.11
SCAMP2-202ENST00000562363 FSTL1Q12841 308 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms