RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 LMO7Q8WWI1 1683 aa13.69□□□□□ -0.22
VAC14-203ENST00000561879 EVA1CP58658 441 aa13.69□□□□□ -0.22
VAC14-203ENST00000561879 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
VAC14-203ENST00000561879 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
VAC14-203ENST00000561879 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
VAC14-203ENST00000561879 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
VAC14-203ENST00000561879 FAM208AQ9UK61 1670 aaKnown RBP13.67□□□□□ -0.22
VAC14-203ENST00000561879 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
VAC14-203ENST00000561879 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
VAC14-203ENST00000561879 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
VAC14-203ENST00000561879 BTG4Q9NY30 223 aa13.67□□□□□ -0.22
VAC14-203ENST00000561879 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
VAC14-203ENST00000561879 TATP17735 454 aaPredicted RBP13.66□□□□□ -0.22
VAC14-203ENST00000561879 GNAI1P63096 354 aa13.66□□□□□ -0.22
VAC14-203ENST00000561879 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
VAC14-203ENST00000561879 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
VAC14-203ENST00000561879 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
VAC14-203ENST00000561879 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
VAC14-203ENST00000561879 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
VAC14-203ENST00000561879 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
VAC14-203ENST00000561879 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
VAC14-203ENST00000561879 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
VAC14-203ENST00000561879 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
VAC14-203ENST00000561879 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
VAC14-203ENST00000561879 HSPA1LP34931 641 aa13.64□□□□□ -0.23
VAC14-203ENST00000561879 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
VAC14-203ENST00000561879 CRB1P82279 1406 aa13.64□□□□□ -0.23
VAC14-203ENST00000561879 CHL1O00533 1208 aa13.63□□□□□ -0.23
VAC14-203ENST00000561879 ADAMTS2O95450 1211 aa13.63□□□□□ -0.23
VAC14-203ENST00000561879 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
VAC14-203ENST00000561879 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
VAC14-203ENST00000561879 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
VAC14-203ENST00000561879 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
VAC14-203ENST00000561879 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
VAC14-203ENST00000561879 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
VAC14-203ENST00000561879 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
VAC14-203ENST00000561879 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
VAC14-203ENST00000561879 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
VAC14-203ENST00000561879 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 IL2RBP14784 551 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 TIE1P35590 1138 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
VAC14-203ENST00000561879 DCTN1Q14203 1278 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 E2F4Q16254 413 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 MCM10Q7L590 875 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
VAC14-203ENST00000561879 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
VAC14-203ENST00000561879 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
VAC14-203ENST00000561879 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
VAC14-203ENST00000561879 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
VAC14-203ENST00000561879 SLIT2O94813 1529 aa13.6□□□□□ -0.23
VAC14-203ENST00000561879 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
VAC14-203ENST00000561879 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
VAC14-203ENST00000561879 IFNL2Q8IZJ0 200 aa13.6□□□□□ -0.23
VAC14-203ENST00000561879 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
VAC14-203ENST00000561879 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
VAC14-203ENST00000561879 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
VAC14-203ENST00000561879 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
VAC14-203ENST00000561879 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
VAC14-203ENST00000561879 MEGF6O75095 1541 aa13.59□□□□□ -0.23
VAC14-203ENST00000561879 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.23
VAC14-203ENST00000561879 PHKG2P15735 406 aa13.58□□□□□ -0.24
VAC14-203ENST00000561879 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
VAC14-203ENST00000561879 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
VAC14-203ENST00000561879 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
VAC14-203ENST00000561879 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
VAC14-203ENST00000561879 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
VAC14-203ENST00000561879 NEFLP07196 543 aa13.57□□□□□ -0.24
VAC14-203ENST00000561879 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
VAC14-203ENST00000561879 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
VAC14-203ENST00000561879 DCAF5Q96JK2 942 aa13.57□□□□□ -0.24
VAC14-203ENST00000561879 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
VAC14-203ENST00000561879 LAS1LQ9Y4W2 734 aaKnown RBP13.57□□□□□ -0.24
VAC14-203ENST00000561879 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
VAC14-203ENST00000561879 PDE4AP27815 886 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 MFSD10Q14728 455 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
VAC14-203ENST00000561879 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
VAC14-203ENST00000561879 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
VAC14-203ENST00000561879 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
VAC14-203ENST00000561879 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
VAC14-203ENST00000561879 CYP27B1O15528 508 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
VAC14-203ENST00000561879 TEFQ10587 303 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 VPS72Q15906 364 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
VAC14-203ENST00000561879 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
VAC14-203ENST00000561879 VAMP4O75379 141 aa13.54□□□□□ -0.24
VAC14-203ENST00000561879 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
VAC14-203ENST00000561879 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
VAC14-203ENST00000561879 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms