RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 IRF5Q13568 498 aa9.3□□□□□ -0.92
PTPN9-202ENST00000561731 TMEM214Q6NUQ4 689 aaKnown RBP9.3□□□□□ -0.92
PTPN9-202ENST00000561731 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
PTPN9-202ENST00000561731 FHDC1Q9C0D6 1143 aaPredicted RBP9.3□□□□□ -0.92
PTPN9-202ENST00000561731 GPAMQ9HCL2 828 aa9.3□□□□□ -0.92
PTPN9-202ENST00000561731 PHKA2P46019 1235 aa9.29□□□□□ -0.92
PTPN9-202ENST00000561731 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
PTPN9-202ENST00000561731 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
PTPN9-202ENST00000561731 ACDQ96AP0 544 aa9.29□□□□□ -0.92
PTPN9-202ENST00000561731 SIRT1Q96EB6 747 aa9.29□□□□□ -0.92
PTPN9-202ENST00000561731 PHF20L1A8MW92 1017 aa9.28□□□□□ -0.92
PTPN9-202ENST00000561731 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
PTPN9-202ENST00000561731 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
PTPN9-202ENST00000561731 PHF24Q9UPV7 400 aa9.28□□□□□ -0.92
PTPN9-202ENST00000561731 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 MAP2K3P46734 347 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 FOXK2Q01167 660 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 VAC14Q08AM6 782 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
PTPN9-202ENST00000561731 TSGA10IPQ3SY00 556 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
PTPN9-202ENST00000561731 IGHA1P01876 353 aa9.26□□□□□ -0.93
PTPN9-202ENST00000561731 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
PTPN9-202ENST00000561731 RHBDD1Q8TEB9 315 aa9.26□□□□□ -0.93
PTPN9-202ENST00000561731 ETNK1Q9HBU6 452 aa9.26□□□□□ -0.93
PTPN9-202ENST00000561731 THBS1P07996 1170 aa9.25□□□□□ -0.93
PTPN9-202ENST00000561731 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
PTPN9-202ENST00000561731 TLR1Q15399 786 aa9.25□□□□□ -0.93
PTPN9-202ENST00000561731 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
PTPN9-202ENST00000561731 BEND7Q8N7W2 519 aaPredicted RBP9.25□□□□□ -0.93
PTPN9-202ENST00000561731 GDPD2Q9HCC8 539 aa9.25□□□□□ -0.93
PTPN9-202ENST00000561731 CHIC2Q9UKJ5 165 aa9.25□□□□□ -0.93
PTPN9-202ENST00000561731 ABL2P42684 1182 aa9.24□□□□□ -0.93
PTPN9-202ENST00000561731 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
PTPN9-202ENST00000561731 OXCT2Q9BYC2 517 aaPredicted RBP9.24□□□□□ -0.93
PTPN9-202ENST00000561731 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
PTPN9-202ENST00000561731 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
PTPN9-202ENST00000561731 OIP5O43482 229 aa9.23□□□□□ -0.93
PTPN9-202ENST00000561731 MSX1P28360 303 aa9.23□□□□□ -0.93
PTPN9-202ENST00000561731 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
PTPN9-202ENST00000561731 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
PTPN9-202ENST00000561731 STAU1O95793 577 aaKnown RBP9.22□□□□□ -0.93
PTPN9-202ENST00000561731 SEMA3FQ13275 785 aa9.22□□□□□ -0.93
PTPN9-202ENST00000561731 PLPP7Q8NBV4 271 aa9.21□□□□□ -0.94
PTPN9-202ENST00000561731 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
PTPN9-202ENST00000561731 INHAP05111 366 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 SOX11P35716 441 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 PLA2G4AP47712 749 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 GDF10P55107 478 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 UBAP2LQ14157 1087 aaKnown RBP9.2□□□□□ -0.94
PTPN9-202ENST00000561731 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 KLRG1Q96E93 195 aa9.2□□□□□ -0.94
PTPN9-202ENST00000561731 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
PTPN9-202ENST00000561731 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
PTPN9-202ENST00000561731 SCNN1DP51172 638 aa9.19□□□□□ -0.94
PTPN9-202ENST00000561731 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
PTPN9-202ENST00000561731 CRISPLD1Q9H336 500 aa9.19□□□□□ -0.94
PTPN9-202ENST00000561731 MCM6Q14566 821 aa9.18□□□□□ -0.94
PTPN9-202ENST00000561731 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
PTPN9-202ENST00000561731 BMP4P12644 408 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 FGFR3P22607 806 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 FIGNL1Q6PIW4 674 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 GOLGA6L1Q8N7Z2 621 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 GALNT6Q8NCL4 622 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 C1orf216Q8TAB5 229 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 ABHD17AQ96GS6 310 aa9.17□□□□□ -0.94
PTPN9-202ENST00000561731 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
PTPN9-202ENST00000561731 SMTNP53814 917 aa9.16□□□□□ -0.94
PTPN9-202ENST00000561731 PLA2G4EQ3MJ16 856 aa9.16□□□□□ -0.94
PTPN9-202ENST00000561731 SHISA8B8ZZ34 492 aa9.15□□□□□ -0.94
PTPN9-202ENST00000561731 EDARADDQ8WWZ3 215 aa9.15□□□□□ -0.94
PTPN9-202ENST00000561731 NDFIP2Q9NV92 336 aa9.15□□□□□ -0.94
PTPN9-202ENST00000561731 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
PTPN9-202ENST00000561731 MSTNO14793 375 aa9.14□□□□□ -0.95
PTPN9-202ENST00000561731 BNIP3LO60238 219 aa9.14□□□□□ -0.95
PTPN9-202ENST00000561731 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
PTPN9-202ENST00000561731 AIDAQ96BJ3 306 aa9.14□□□□□ -0.95
PTPN9-202ENST00000561731 RRAGCQ9HB90 399 aa9.14□□□□□ -0.95
PTPN9-202ENST00000561731 ATP4AP20648 1035 aa9.13□□□□□ -0.95
PTPN9-202ENST00000561731 SNRPNP63162 240 aaKnown RBP9.13□□□□□ -0.95
PTPN9-202ENST00000561731 SLCO4C1Q6ZQN7 724 aa9.13□□□□□ -0.95
PTPN9-202ENST00000561731 C1orf229Q6ZS94 237 aaPredicted RBP9.13□□□□□ -0.95
PTPN9-202ENST00000561731 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
PTPN9-202ENST00000561731 SERTAD1Q9UHV2 236 aa9.13□□□□□ -0.95
PTPN9-202ENST00000561731 PCDHGC4Q9Y5F7 938 aa9.13□□□□□ -0.95
PTPN9-202ENST00000561731 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 C2CD2LO14523 706 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 CTBSQ01459 385 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 EML3Q32P44 896 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 ZCCHC2Q9C0B9 1178 aaKnown RBP9.12□□□□□ -0.95
PTPN9-202ENST00000561731 GGA1Q9UJY5 639 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 COG6Q9Y2V7 657 aa9.12□□□□□ -0.95
PTPN9-202ENST00000561731 A6NJY4 79 aa9.11□□□□□ -0.95
PTPN9-202ENST00000561731 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
PTPN9-202ENST00000561731 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms