RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 TLR1Q15399 786 aa10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 NUCKS1Q9H1E3 243 aaKnown RBP10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 MBIPQ9NS73 344 aa10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
HMBOX1-216ENST00000561377 WHAMMQ8TF30 809 aa10.81□□□□□ -0.68
HMBOX1-216ENST00000561377 GDF10P55107 478 aa10.8□□□□□ -0.68
HMBOX1-216ENST00000561377 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
HMBOX1-216ENST00000561377 RNF225M0QZC1 329 aaPredicted RBP10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 STAU1O95793 577 aaKnown RBP10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 INHAP05111 366 aa10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 UBTFP17480 764 aaKnown RBP10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 MAP3K10Q02779 954 aa10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 POM121Q96HA1 1249 aa10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 GPAMQ9HCL2 828 aa10.79□□□□□ -0.68
HMBOX1-216ENST00000561377 LZTS3O60299 673 aaPredicted RBP10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 ARHGEF15O94989 841 aa10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 SCNN1DP51172 638 aa10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 KCNMA1Q12791 1236 aa10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 LBRQ14739 615 aaKnown RBP10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 EML3Q32P44 896 aa10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 ALG2Q9H553 416 aa10.78□□□□□ -0.68
HMBOX1-216ENST00000561377 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 CSB-PGBD3P0DP91 1061 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 SKIP12755 728 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 PGBD3Q8N328 593 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 NSFL1CQ9UNZ2 370 aaKnown RBP10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 IGF1RP08069 1367 aa10.77□□□□□ -0.69
HMBOX1-216ENST00000561377 MX2P20592 715 aa10.76□□□□□ -0.69
HMBOX1-216ENST00000561377 CELA2BP08218 269 aaPredicted RBP10.75□□□□□ -0.69
HMBOX1-216ENST00000561377 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
HMBOX1-216ENST00000561377 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
HMBOX1-216ENST00000561377 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
HMBOX1-216ENST00000561377 MSX1P28360 303 aa10.74□□□□□ -0.69
HMBOX1-216ENST00000561377 SMTNP53814 917 aa10.74□□□□□ -0.69
HMBOX1-216ENST00000561377 MARSP56192 900 aaKnown RBP10.74□□□□□ -0.69
HMBOX1-216ENST00000561377 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
HMBOX1-216ENST00000561377 CFHR5Q9BXR6 569 aa10.74□□□□□ -0.69
HMBOX1-216ENST00000561377 PLA2G4AP47712 749 aa10.73□□□□□ -0.69
HMBOX1-216ENST00000561377 TMEM132AQ24JP5 1023 aa10.73□□□□□ -0.69
HMBOX1-216ENST00000561377 TBC1D9Q6ZT07 1266 aa10.73□□□□□ -0.69
HMBOX1-216ENST00000561377 RUBCNLQ9H714 662 aa10.73□□□□□ -0.69
HMBOX1-216ENST00000561377 THBS1P07996 1170 aa10.72□□□□□ -0.69
HMBOX1-216ENST00000561377 NIFKQ9BYG3 293 aaKnown RBP10.72□□□□□ -0.69
HMBOX1-216ENST00000561377 SERTAD1Q9UHV2 236 aa10.72□□□□□ -0.69
HMBOX1-216ENST00000561377 TMEM229AB2RXF0 380 aa10.71□□□□□ -0.69
HMBOX1-216ENST00000561377 NCOA4Q13772 614 aa10.71□□□□□ -0.69
HMBOX1-216ENST00000561377 SCARF2Q96GP6 870 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-216ENST00000561377 SLC4A9Q96Q91 983 aa10.71□□□□□ -0.69
HMBOX1-216ENST00000561377 PCDHGA11Q9Y5H2 935 aa10.71□□□□□ -0.69
HMBOX1-216ENST00000561377 MAP2K3P46734 347 aa10.7□□□□□ -0.7
HMBOX1-216ENST00000561377 GTF2IP78347 998 aa10.7□□□□□ -0.7
HMBOX1-216ENST00000561377 C1orf216Q8TAB5 229 aa10.7□□□□□ -0.7
HMBOX1-216ENST00000561377 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
HMBOX1-216ENST00000561377 A6NJY4 79 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 BACH1O14867 736 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 BCRP11274 1271 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 PSME1Q06323 249 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 MTFR1Q15390 333 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 ACDQ96AP0 544 aa10.69□□□□□ -0.7
HMBOX1-216ENST00000561377 POM121CA8CG34 1229 aa10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 CDK2AP1O14519 115 aa10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 GSK3AP49840 483 aa10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 RASSF7Q02833 373 aa10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 UBAP2LQ14157 1087 aaKnown RBP10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 TMEM151AQ8N4L1 468 aa10.68□□□□□ -0.7
HMBOX1-216ENST00000561377 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
HMBOX1-216ENST00000561377 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
HMBOX1-216ENST00000561377 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
HMBOX1-216ENST00000561377 ATXN7L1Q9ULK2 861 aaPredicted RBP10.67□□□□□ -0.7
HMBOX1-216ENST00000561377 GDF11O95390 407 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 FIGNL1Q6PIW4 674 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 TRIM50Q86XT4 487 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 DEPDC4Q8N2C3 294 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
HMBOX1-216ENST00000561377 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.7
HMBOX1-216ENST00000561377 KANK3Q6NY19 840 aa10.65□□□□□ -0.7
HMBOX1-216ENST00000561377 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
HMBOX1-216ENST00000561377 CABP1Q9NZU7 370 aa10.65□□□□□ -0.7
HMBOX1-216ENST00000561377 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
HMBOX1-216ENST00000561377 TATP17735 454 aaPredicted RBP10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 ATP4AP20648 1035 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 IRS1P35568 1242 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 NLRP8Q86W28 1048 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 PLEKHM2Q8IWE5 1019 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 ZNF358Q9NW07 568 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 ZDHHC3Q9NYG2 299 aa10.64□□□□□ -0.71
HMBOX1-216ENST00000561377 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
HMBOX1-216ENST00000561377 ABHD17AQ96GS6 310 aa10.63□□□□□ -0.71
HMBOX1-216ENST00000561377 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 OIP5O43482 229 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 BNIP3LO60238 219 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 FGFR3P22607 806 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms