RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 RBM42Q9BTD8 480 aaKnown RBP25.43■■□□□ 1.66
LINC01220-202ENST00000561000 PLEKHG2Q9H7P9 1386 aa25.43■■□□□ 1.66
LINC01220-202ENST00000561000 GNPATO15228 680 aa25.42■■□□□ 1.66
LINC01220-202ENST00000561000 SSFA2P28290 1259 aa25.42■■□□□ 1.66
LINC01220-202ENST00000561000 CABP4P57796 275 aa25.42■■□□□ 1.66
LINC01220-202ENST00000561000 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
LINC01220-202ENST00000561000 IL13P35225 146 aa25.41■■□□□ 1.66
LINC01220-202ENST00000561000 MTHFSP49914 203 aa25.41■■□□□ 1.66
LINC01220-202ENST00000561000 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
LINC01220-202ENST00000561000 COL24A1Q17RW2 1714 aa25.4■■□□□ 1.66
LINC01220-202ENST00000561000 CD2APQ9Y5K6 639 aa25.39■■□□□ 1.66
LINC01220-202ENST00000561000 YBX3P16989 372 aaKnown RBP eCLIP25.37■■□□□ 1.65
LINC01220-202ENST00000561000 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
LINC01220-202ENST00000561000 SLC4A9Q96Q91 983 aa25.37■■□□□ 1.65
LINC01220-202ENST00000561000 TAF1LQ8IZX4 1826 aa25.37■■□□□ 1.65
LINC01220-202ENST00000561000 UTRNP46939 3433 aa25.36■■□□□ 1.65
LINC01220-202ENST00000561000 GRIN3BO60391 1043 aa25.36■■□□□ 1.65
LINC01220-202ENST00000561000 CNGB1Q14028 1251 aaPredicted RBP25.36■■□□□ 1.65
LINC01220-202ENST00000561000 PER1O15534 1290 aaPredicted RBP25.35■■□□□ 1.65
LINC01220-202ENST00000561000 KDM6AO15550 1401 aaPredicted RBP25.35■■□□□ 1.65
LINC01220-202ENST00000561000 TRAPPC3LQ5T215 181 aa25.34■■□□□ 1.65
LINC01220-202ENST00000561000 NFATC2IPQ8NCF5 419 aa25.34■■□□□ 1.65
LINC01220-202ENST00000561000 RTCBQ9Y3I0 505 aaKnown RBP25.34■■□□□ 1.65
LINC01220-202ENST00000561000 PTCD1O75127 700 aaKnown RBP25.33■■□□□ 1.65
LINC01220-202ENST00000561000 HMOX1P09601 288 aa25.32■■□□□ 1.64
LINC01220-202ENST00000561000 KDRP35968 1356 aa25.31■■□□□ 1.64
LINC01220-202ENST00000561000 RC3H1Q5TC82 1133 aaKnown RBP25.3■■□□□ 1.64
LINC01220-202ENST00000561000 WWC3Q9ULE0 1092 aa25.3■■□□□ 1.64
LINC01220-202ENST00000561000 AKAP4Q5JQC9 854 aa25.29■■□□□ 1.64
LINC01220-202ENST00000561000 ARHGEF1Q92888 912 aaKnown RBP25.29■■□□□ 1.64
LINC01220-202ENST00000561000 DIAPH1O60610 1272 aaKnown RBP25.28■■□□□ 1.64
LINC01220-202ENST00000561000 MMP10P09238 476 aa25.28■■□□□ 1.64
LINC01220-202ENST00000561000 UBR3Q6ZT12 1888 aa25.28■■□□□ 1.64
LINC01220-202ENST00000561000 RPS6KA4O75676 772 aa25.27■■□□□ 1.64
LINC01220-202ENST00000561000 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
LINC01220-202ENST00000561000 RFC4P35249 363 aa25.26■■□□□ 1.63
LINC01220-202ENST00000561000 CNTNAP4Q9C0A0 1308 aa25.26■■□□□ 1.63
LINC01220-202ENST00000561000 CHD4Q14839 1912 aa25.25■■□□□ 1.63
LINC01220-202ENST00000561000 ADRA2BP18089 450 aa25.25■■□□□ 1.63
LINC01220-202ENST00000561000 NLGN1Q8N2Q7 840 aa25.25■■□□□ 1.63
LINC01220-202ENST00000561000 RNMTO43148 476 aaKnown RBP25.23■■□□□ 1.63
LINC01220-202ENST00000561000 CRKLP46109 303 aaKnown RBP25.23■■□□□ 1.63
LINC01220-202ENST00000561000 SLC52A2Q9HAB3 445 aa25.23■■□□□ 1.63
LINC01220-202ENST00000561000 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
LINC01220-202ENST00000561000 GYS1P13807 737 aa25.21■■□□□ 1.63
LINC01220-202ENST00000561000 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
LINC01220-202ENST00000561000 C1QTNF8P60827 252 aa25.19■■□□□ 1.62
LINC01220-202ENST00000561000 SLC39A6Q13433 755 aa25.19■■□□□ 1.62
LINC01220-202ENST00000561000 PARP3Q9Y6F1 533 aa25.18■■□□□ 1.62
LINC01220-202ENST00000561000 GIGYF1O75420 1035 aaPredicted RBP25.17■■□□□ 1.62
LINC01220-202ENST00000561000 DNAJC10Q8IXB1 793 aa25.17■■□□□ 1.62
LINC01220-202ENST00000561000 SRP68Q9UHB9 627 aaKnown RBP25.17■■□□□ 1.62
LINC01220-202ENST00000561000 GOLGB1Q14789 3259 aaKnown RBP25.17■■□□□ 1.62
LINC01220-202ENST00000561000 NPC1L1Q9UHC9 1359 aa25.17■■□□□ 1.62
LINC01220-202ENST00000561000 CCDC87Q9NVE4 849 aa25.16■■□□□ 1.62
LINC01220-202ENST00000561000 A0A0G2JLW4 131 aa25.15■■□□□ 1.62
LINC01220-202ENST00000561000 TGFB2P61812 414 aa25.15■■□□□ 1.62
LINC01220-202ENST00000561000 INTS5Q6P9B9 1019 aaKnown RBP25.15■■□□□ 1.62
LINC01220-202ENST00000561000 ZNF831Q5JPB2 1677 aa25.14■■□□□ 1.62
LINC01220-202ENST00000561000 FKBP8Q14318 412 aa25.12■■□□□ 1.61
LINC01220-202ENST00000561000 BCS1LQ9Y276 419 aa25.12■■□□□ 1.61
LINC01220-202ENST00000561000 SENP3-EIF4A1A0A087X0R7 540 aa25.11■■□□□ 1.61
LINC01220-202ENST00000561000 CICQ96RK0 1608 aaPredicted RBP25.11■■□□□ 1.61
LINC01220-202ENST00000561000 USP42Q9H9J4 1324 aaKnown RBP25.11■■□□□ 1.61
LINC01220-202ENST00000561000 CYP19A1P11511 503 aaPredicted RBP25.1■■□□□ 1.61
LINC01220-202ENST00000561000 DPEP1P16444 411 aa25.1■■□□□ 1.61
LINC01220-202ENST00000561000 ATP10DQ9P241 1426 aa25.1■■□□□ 1.61
LINC01220-202ENST00000561000 PXDNLA1KZ92 1463 aa25.09■■□□□ 1.61
LINC01220-202ENST00000561000 COL5A3P25940 1745 aaPredicted RBP25.09■■□□□ 1.61
LINC01220-202ENST00000561000 ZPR1O75312 459 aa25.09■■□□□ 1.61
LINC01220-202ENST00000561000 ZNF526Q8TF50 670 aaPredicted RBP25.09■■□□□ 1.61
LINC01220-202ENST00000561000 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
LINC01220-202ENST00000561000 MYH14Q7Z406 1995 aaKnown RBP25.08■■□□□ 1.61
LINC01220-202ENST00000561000 GAS2L2Q8NHY3 880 aa25.08■■□□□ 1.61
LINC01220-202ENST00000561000 SCN11AQ9UI33 1791 aa25.08■■□□□ 1.6
LINC01220-202ENST00000561000 C10orf71Q711Q0 1435 aa25.07■■□□□ 1.6
LINC01220-202ENST00000561000 GNAT3A8MTJ3 354 aa25.07■■□□□ 1.6
LINC01220-202ENST00000561000 TEFQ10587 303 aa25.07■■□□□ 1.6
LINC01220-202ENST00000561000 USPL1Q5W0Q7 1092 aa25.07■■□□□ 1.6
LINC01220-202ENST00000561000 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
LINC01220-202ENST00000561000 GPBP1L1Q9HC44 474 aaPredicted RBP25.07■■□□□ 1.6
LINC01220-202ENST00000561000 COL3A1P02461 1466 aaPredicted RBP25.07■■□□□ 1.6
LINC01220-202ENST00000561000 DDR1Q08345 913 aa25.06■■□□□ 1.6
LINC01220-202ENST00000561000 IL17REQ8NFR9 667 aa25.06■■□□□ 1.6
LINC01220-202ENST00000561000 MRC1P22897 1456 aa25.06■■□□□ 1.6
LINC01220-202ENST00000561000 SOS1Q07889 1333 aaPredicted RBP25.06■■□□□ 1.6
LINC01220-202ENST00000561000 FCHSD2O94868 740 aa25.05■■□□□ 1.6
LINC01220-202ENST00000561000 VSIG10Q8N0Z9 540 aa25.05■■□□□ 1.6
LINC01220-202ENST00000561000 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
LINC01220-202ENST00000561000 ARHGAP27Q6ZUM4 889 aa25.04■■□□□ 1.6
LINC01220-202ENST00000561000 NUDCQ9Y266 331 aa25.04■■□□□ 1.6
LINC01220-202ENST00000561000 TJP1Q07157 1748 aa25.03■■□□□ 1.6
LINC01220-202ENST00000561000 CANXP27824 592 aaKnown RBP25.03■■□□□ 1.6
LINC01220-202ENST00000561000 TM4SF1P30408 202 aa25.03■■□□□ 1.6
LINC01220-202ENST00000561000 PRKAR2BP31323 418 aa25.03■■□□□ 1.6
LINC01220-202ENST00000561000 PHACTR3Q96KR7 559 aa25.03■■□□□ 1.6
LINC01220-202ENST00000561000 POLRMTO00411 1230 aaKnown RBP25.02■■□□□ 1.6
LINC01220-202ENST00000561000 KCNA3P22001 575 aa25.02■■□□□ 1.6
LINC01220-202ENST00000561000 C4AP0C0L4 1744 aa25.02■■□□□ 1.6
LINC01220-202ENST00000561000 ADCY9O60503 1353 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms