RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PLIN1O60240 522 aa14.58□□□□□ -0.08
SNX1-212ENST00000560861 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
SNX1-212ENST00000560861 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.08
SNX1-212ENST00000560861 GLI3P10071 1580 aa14.58□□□□□ -0.08
SNX1-212ENST00000560861 HEG1Q9ULI3 1381 aa14.58□□□□□ -0.08
SNX1-212ENST00000560861 TWISTNBQ3B726 338 aaPredicted RBP14.57□□□□□ -0.08
SNX1-212ENST00000560861 DCAF5Q96JK2 942 aa14.57□□□□□ -0.08
SNX1-212ENST00000560861 TNS2Q63HR2 1409 aa14.57□□□□□ -0.08
SNX1-212ENST00000560861 CACNA1FO60840 1977 aa14.56□□□□□ -0.08
SNX1-212ENST00000560861 UBR2Q8IWV8 1755 aa14.56□□□□□ -0.08
SNX1-212ENST00000560861 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
SNX1-212ENST00000560861 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
SNX1-212ENST00000560861 UNC5CLQ8IV45 518 aa14.56□□□□□ -0.08
SNX1-212ENST00000560861 THRAP3Q9Y2W1 955 aaKnown RBP14.56□□□□□ -0.08
SNX1-212ENST00000560861 SOS1Q07889 1333 aaPredicted RBP14.56□□□□□ -0.08
SNX1-212ENST00000560861 TEFQ10587 303 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 VPS72Q15906 364 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
SNX1-212ENST00000560861 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
SNX1-212ENST00000560861 CDCA7Q9BWT1 371 aaPredicted RBP14.55□□□□□ -0.08
SNX1-212ENST00000560861 BCL2L13Q9BXK5 485 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 ITGB4P16144 1822 aa14.55□□□□□ -0.08
SNX1-212ENST00000560861 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
SNX1-212ENST00000560861 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
SNX1-212ENST00000560861 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
SNX1-212ENST00000560861 C5P01031 1676 aa14.53□□□□□ -0.08
SNX1-212ENST00000560861 ELL2O00472 640 aaPredicted RBP14.53□□□□□ -0.08
SNX1-212ENST00000560861 KCNQ3O43525 872 aa14.53□□□□□ -0.08
SNX1-212ENST00000560861 NGLY1Q96IV0 654 aa14.53□□□□□ -0.08
SNX1-212ENST00000560861 C8orf37Q96NL8 207 aa14.53□□□□□ -0.08
SNX1-212ENST00000560861 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
SNX1-212ENST00000560861 CRBNQ96SW2 442 aa14.52□□□□□ -0.09
SNX1-212ENST00000560861 TNNQ9UQP3 1299 aa14.52□□□□□ -0.09
SNX1-212ENST00000560861 ATRNO75882 1429 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 BTBD11A6QL63 1104 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 ERVV-2B6SEH9 535 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 HOXB7P09629 217 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 ZKSCAN2Q63HK3 967 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 EXOC6Q8TAG9 804 aa14.51□□□□□ -0.09
SNX1-212ENST00000560861 RGS12O14924 1447 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 DOT1LQ8TEK3 1739 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 RLBP1P12271 317 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 NFATC2IPQ8NCF5 419 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 PPP4R2Q9NY27 417 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 KCPQ6ZWJ8 1503 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 LAMB4A4D0S4 1761 aa14.5□□□□□ -0.09
SNX1-212ENST00000560861 ARHGAP45Q92619 1136 aa14.49□□□□□ -0.09
SNX1-212ENST00000560861 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
SNX1-212ENST00000560861 AFF2P51816 1311 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 N4BP2Q86UW6 1770 aaPredicted RBP14.48□□□□□ -0.09
SNX1-212ENST00000560861 EXOC5O00471 708 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 TRIM27P14373 513 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 ZNF790Q6PG37 636 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 DDX54Q8TDD1 881 aaKnown RBP14.48□□□□□ -0.09
SNX1-212ENST00000560861 FRAT1Q92837 279 aaPredicted RBP14.48□□□□□ -0.09
SNX1-212ENST00000560861 USP21Q9UK80 565 aa14.48□□□□□ -0.09
SNX1-212ENST00000560861 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
SNX1-212ENST00000560861 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
SNX1-212ENST00000560861 CABP4P57796 275 aa14.47□□□□□ -0.09
SNX1-212ENST00000560861 PANK1Q8TE04 598 aa14.47□□□□□ -0.09
SNX1-212ENST00000560861 SLC39A6Q13433 755 aa14.46□□□□□ -0.09
SNX1-212ENST00000560861 ABCC4O15439 1325 aa14.45□□□□□ -0.1
SNX1-212ENST00000560861 BCL9O00512 1426 aa14.45□□□□□ -0.1
SNX1-212ENST00000560861 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
SNX1-212ENST00000560861 DDB1Q16531 1140 aa14.45□□□□□ -0.1
SNX1-212ENST00000560861 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
SNX1-212ENST00000560861 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
SNX1-212ENST00000560861 MARCH10Q8NA82 808 aaPredicted RBP14.45□□□□□ -0.1
SNX1-212ENST00000560861 MS4A1P11836 297 aa14.44□□□□□ -0.1
SNX1-212ENST00000560861 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
SNX1-212ENST00000560861 CCDC30Q5VVM6 783 aa14.44□□□□□ -0.1
SNX1-212ENST00000560861 G2E3Q7L622 706 aa14.44□□□□□ -0.1
SNX1-212ENST00000560861 ZNF496Q96IT1 587 aaPredicted RBP14.44□□□□□ -0.1
SNX1-212ENST00000560861 PTPRCP08575 1304 aa14.43□□□□□ -0.1
SNX1-212ENST00000560861 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 MVPQ14764 893 aaKnown RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 FAM98CQ17RN3 349 aaKnown RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 HDGFL1Q5TGJ6 251 aa14.43□□□□□ -0.1
SNX1-212ENST00000560861 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
SNX1-212ENST00000560861 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 CICQ96RK0 1608 aaPredicted RBP14.43□□□□□ -0.1
SNX1-212ENST00000560861 PRAMEF22A3QJZ6 481 aa14.42□□□□□ -0.1
SNX1-212ENST00000560861 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
SNX1-212ENST00000560861 ZNF772Q68DY9 489 aaPredicted RBP14.42□□□□□ -0.1
SNX1-212ENST00000560861 PIGBQ92521 554 aa14.42□□□□□ -0.1
SNX1-212ENST00000560861 CLUAP1Q96AJ1 413 aa14.42□□□□□ -0.1
SNX1-212ENST00000560861 GJD4Q96KN9 370 aaPredicted RBP14.42□□□□□ -0.1
SNX1-212ENST00000560861 TMEM57Q8N5G2 664 aa14.41□□□□□ -0.1
SNX1-212ENST00000560861 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
SNX1-212ENST00000560861 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
SNX1-212ENST00000560861 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
SNX1-212ENST00000560861 TRPC5Q9UL62 973 aaPredicted RBP14.41□□□□□ -0.1
SNX1-212ENST00000560861 TJP1Q07157 1748 aa14.41□□□□□ -0.1
SNX1-212ENST00000560861 KAT6BQ8WYB5 2073 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms