RNA–Protein interactions for RNA: ENST00000560755.5

LRRC49-225, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-225ENST00000560755 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 CYP27B1O15528 508 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 ATP6V1AP38606 617 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 SIK1P57059 783 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 TGFB2P61812 414 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
LRRC49-225ENST00000560755 PIGBQ92521 554 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 PUS7Q96PZ0 661 aaKnown RBP11.44□□□□□ -0.58
LRRC49-225ENST00000560755 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
LRRC49-225ENST00000560755 CICQ96RK0 1608 aaPredicted RBP11.44□□□□□ -0.58
LRRC49-225ENST00000560755 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
LRRC49-225ENST00000560755 CCDC87Q9NVE4 849 aa11.43□□□□□ -0.58
LRRC49-225ENST00000560755 TMOD3Q9NYL9 352 aa11.43□□□□□ -0.58
LRRC49-225ENST00000560755 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
LRRC49-225ENST00000560755 ITGB4P16144 1822 aa11.42□□□□□ -0.58
LRRC49-225ENST00000560755 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
LRRC49-225ENST00000560755 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
LRRC49-225ENST00000560755 SPG7Q9UQ90 795 aa11.42□□□□□ -0.58
LRRC49-225ENST00000560755 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 DPEP1P16444 411 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 TMF1P82094 1093 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 FSTL1Q12841 308 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 NLGN1Q8N2Q7 840 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
LRRC49-225ENST00000560755 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 INSRP06213 1382 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 FLT4P35916 1363 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
LRRC49-225ENST00000560755 PRELPP51888 382 aa11.4□□□□□ -0.58
LRRC49-225ENST00000560755 ITPK1Q13572 414 aa11.4□□□□□ -0.58
LRRC49-225ENST00000560755 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
LRRC49-225ENST00000560755 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
LRRC49-225ENST00000560755 FYB1O15117 783 aa11.39□□□□□ -0.59
LRRC49-225ENST00000560755 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
LRRC49-225ENST00000560755 RFC4P35249 363 aa11.39□□□□□ -0.59
LRRC49-225ENST00000560755 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
LRRC49-225ENST00000560755 RRAGCQ9HB90 399 aa11.39□□□□□ -0.59
LRRC49-225ENST00000560755 RNF181Q9P0P0 153 aa11.39□□□□□ -0.59
LRRC49-225ENST00000560755 C10orf71Q711Q0 1435 aa11.38□□□□□ -0.59
LRRC49-225ENST00000560755 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
LRRC49-225ENST00000560755 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
LRRC49-225ENST00000560755 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
LRRC49-225ENST00000560755 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
LRRC49-225ENST00000560755 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
LRRC49-225ENST00000560755 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
LRRC49-225ENST00000560755 IFNL2Q8IZJ0 200 aa11.37□□□□□ -0.59
LRRC49-225ENST00000560755 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
LRRC49-225ENST00000560755 PIM2Q9P1W9 311 aa11.37□□□□□ -0.59
LRRC49-225ENST00000560755 MAP2P11137 1827 aaKnown RBP11.37□□□□□ -0.59
LRRC49-225ENST00000560755 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
LRRC49-225ENST00000560755 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 TONSLQ96HA7 1378 aa11.36□□□□□ -0.59
LRRC49-225ENST00000560755 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
LRRC49-225ENST00000560755 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
LRRC49-225ENST00000560755 GYS1P13807 737 aa11.35□□□□□ -0.59
LRRC49-225ENST00000560755 TESK2Q96S53 571 aa11.35□□□□□ -0.59
LRRC49-225ENST00000560755 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
LRRC49-225ENST00000560755 PHKG2P15735 406 aa11.34□□□□□ -0.59
LRRC49-225ENST00000560755 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
LRRC49-225ENST00000560755 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
LRRC49-225ENST00000560755 RPS6KA4O75676 772 aa11.33□□□□□ -0.6
LRRC49-225ENST00000560755 KCNA3P22001 575 aa11.33□□□□□ -0.6
LRRC49-225ENST00000560755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
LRRC49-225ENST00000560755 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
LRRC49-225ENST00000560755 EYA1Q99502 592 aa11.32□□□□□ -0.6
LRRC49-225ENST00000560755 TNRC6CQ9HCJ0 1690 aaKnown RBP11.32□□□□□ -0.6
LRRC49-225ENST00000560755 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
LRRC49-225ENST00000560755 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
LRRC49-225ENST00000560755 CHRNA5P30532 468 aa11.31□□□□□ -0.6
LRRC49-225ENST00000560755 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
LRRC49-225ENST00000560755 KDRP35968 1356 aa11.3□□□□□ -0.6
LRRC49-225ENST00000560755 VEGFAP15692 232 aaPredicted RBP11.3□□□□□ -0.6
LRRC49-225ENST00000560755 CABP4P57796 275 aa11.3□□□□□ -0.6
LRRC49-225ENST00000560755 RASSF7Q02833 373 aa11.3□□□□□ -0.6
LRRC49-225ENST00000560755 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
LRRC49-225ENST00000560755 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
LRRC49-225ENST00000560755 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
LRRC49-225ENST00000560755 HSP90AB1P08238 724 aaKnown RBP11.29□□□□□ -0.6
LRRC49-225ENST00000560755 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 FKBP8Q14318 412 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 WASHC2AQ641Q2 1341 aa11.29□□□□□ -0.6
LRRC49-225ENST00000560755 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
LRRC49-225ENST00000560755 DDR1Q08345 913 aa11.28□□□□□ -0.6
LRRC49-225ENST00000560755 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
LRRC49-225ENST00000560755 ZPR1O75312 459 aa11.27□□□□□ -0.61
LRRC49-225ENST00000560755 LMNB1P20700 586 aa11.27□□□□□ -0.61
LRRC49-225ENST00000560755 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.61
LRRC49-225ENST00000560755 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
LRRC49-225ENST00000560755 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms