RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 TMF1P82094 1093 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
IVD-212ENST00000560660 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
IVD-212ENST00000560660 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
IVD-212ENST00000560660 ITGB4P16144 1822 aa16.69■□□□□ 0.26
IVD-212ENST00000560660 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
IVD-212ENST00000560660 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
IVD-212ENST00000560660 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
IVD-212ENST00000560660 KCNA3P22001 575 aa16.68■□□□□ 0.26
IVD-212ENST00000560660 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
IVD-212ENST00000560660 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
IVD-212ENST00000560660 PUS7Q96PZ0 661 aaKnown RBP16.67■□□□□ 0.26
IVD-212ENST00000560660 GGNBP2Q9H3C7 697 aa16.67■□□□□ 0.26
IVD-212ENST00000560660 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
IVD-212ENST00000560660 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
IVD-212ENST00000560660 RTCBQ9Y3I0 505 aaKnown RBP16.67■□□□□ 0.26
IVD-212ENST00000560660 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
IVD-212ENST00000560660 NKX1-1Q15270 411 aaPredicted RBP16.66■□□□□ 0.26
IVD-212ENST00000560660 C10orf71Q711Q0 1435 aa16.66■□□□□ 0.26
IVD-212ENST00000560660 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
IVD-212ENST00000560660 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
IVD-212ENST00000560660 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
IVD-212ENST00000560660 FYB1O15117 783 aa16.64■□□□□ 0.25
IVD-212ENST00000560660 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
IVD-212ENST00000560660 INSRP06213 1382 aa16.64■□□□□ 0.25
IVD-212ENST00000560660 GYS1P13807 737 aa16.63■□□□□ 0.25
IVD-212ENST00000560660 RFC4P35249 363 aa16.63■□□□□ 0.25
IVD-212ENST00000560660 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
IVD-212ENST00000560660 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
IVD-212ENST00000560660 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
IVD-212ENST00000560660 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
IVD-212ENST00000560660 BRCA1P38398 1863 aaKnown RBP16.6■□□□□ 0.25
IVD-212ENST00000560660 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
IVD-212ENST00000560660 VEGFAP15692 232 aaPredicted RBP16.59■□□□□ 0.25
IVD-212ENST00000560660 CHRNA5P30532 468 aa16.59■□□□□ 0.25
IVD-212ENST00000560660 SLC4A9Q96Q91 983 aa16.59■□□□□ 0.25
IVD-212ENST00000560660 FLT4P35916 1363 aa16.59■□□□□ 0.25
IVD-212ENST00000560660 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
IVD-212ENST00000560660 RPS6KA4O75676 772 aa16.58■□□□□ 0.24
IVD-212ENST00000560660 SLC34A2O95436 690 aa16.58■□□□□ 0.24
IVD-212ENST00000560660 RC3H1Q5TC82 1133 aaKnown RBP16.58■□□□□ 0.24
IVD-212ENST00000560660 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
IVD-212ENST00000560660 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
IVD-212ENST00000560660 PHKG2P15735 406 aa16.57■□□□□ 0.24
IVD-212ENST00000560660 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
IVD-212ENST00000560660 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
IVD-212ENST00000560660 RASSF7Q02833 373 aa16.56■□□□□ 0.24
IVD-212ENST00000560660 TESK2Q96S53 571 aa16.56■□□□□ 0.24
IVD-212ENST00000560660 SBF1O95248 1867 aa16.55■□□□□ 0.24
IVD-212ENST00000560660 ST20-MTHFSA0A0A6YYL1 179 aa16.55■□□□□ 0.24
IVD-212ENST00000560660 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
IVD-212ENST00000560660 FKBP8Q14318 412 aa16.55■□□□□ 0.24
IVD-212ENST00000560660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
IVD-212ENST00000560660 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
IVD-212ENST00000560660 DDR1Q08345 913 aa16.54■□□□□ 0.24
IVD-212ENST00000560660 KDRP35968 1356 aa16.53■□□□□ 0.24
IVD-212ENST00000560660 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
IVD-212ENST00000560660 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
IVD-212ENST00000560660 EYA1Q99502 592 aa16.53■□□□□ 0.24
IVD-212ENST00000560660 MKRN1Q9UHC7 482 aaKnown RBP16.53■□□□□ 0.24
IVD-212ENST00000560660 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
IVD-212ENST00000560660 LMNB1P20700 586 aa16.52■□□□□ 0.24
IVD-212ENST00000560660 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
IVD-212ENST00000560660 POTECB2RU33 542 aa16.5■□□□□ 0.23
IVD-212ENST00000560660 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
IVD-212ENST00000560660 FOXN1O15353 648 aa16.5■□□□□ 0.23
IVD-212ENST00000560660 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
IVD-212ENST00000560660 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
IVD-212ENST00000560660 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
IVD-212ENST00000560660 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
IVD-212ENST00000560660 SLC24A1O60721 1099 aa16.48■□□□□ 0.23
IVD-212ENST00000560660 TM4SF1P30408 202 aa16.48■□□□□ 0.23
IVD-212ENST00000560660 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
IVD-212ENST00000560660 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
IVD-212ENST00000560660 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
IVD-212ENST00000560660 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
IVD-212ENST00000560660 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
IVD-212ENST00000560660 CABP4P57796 275 aa16.47■□□□□ 0.23
IVD-212ENST00000560660 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
IVD-212ENST00000560660 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
IVD-212ENST00000560660 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.23
IVD-212ENST00000560660 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
IVD-212ENST00000560660 ZNF831Q5JPB2 1677 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 ZPR1O75312 459 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
IVD-212ENST00000560660 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 AIDAQ96BJ3 306 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 CARD14Q9BXL6 1004 aa16.44■□□□□ 0.22
IVD-212ENST00000560660 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
IVD-212ENST00000560660 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
IVD-212ENST00000560660 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
IVD-212ENST00000560660 NFKBIEO00221 500 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms