RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 ARHGAP27Q6ZUM4 889 aa18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 RBM46Q8TBY0 533 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 KLRG1Q96E93 195 aa18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 NCAPD2Q15021 1401 aa18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
RABGGTA-213ENST00000560127 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
RABGGTA-213ENST00000560127 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
RABGGTA-213ENST00000560127 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.47
RABGGTA-213ENST00000560127 ATP6V1AP38606 617 aa18.01■□□□□ 0.47
RABGGTA-213ENST00000560127 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-213ENST00000560127 DPEP1P16444 411 aa18■□□□□ 0.47
RABGGTA-213ENST00000560127 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
RABGGTA-213ENST00000560127 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
RABGGTA-213ENST00000560127 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
RABGGTA-213ENST00000560127 CAPN15O75808 1086 aa17.99■□□□□ 0.47
RABGGTA-213ENST00000560127 FCHSD2O94868 740 aa17.99■□□□□ 0.47
RABGGTA-213ENST00000560127 C9orf131Q5VYM1 1079 aa17.99■□□□□ 0.47
RABGGTA-213ENST00000560127 TMF1P82094 1093 aa17.98■□□□□ 0.47
RABGGTA-213ENST00000560127 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
RABGGTA-213ENST00000560127 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
RABGGTA-213ENST00000560127 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-213ENST00000560127 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
RABGGTA-213ENST00000560127 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 KCNA3P22001 575 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 FSTL1Q12841 308 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
RABGGTA-213ENST00000560127 KDRP35968 1356 aa17.96■□□□□ 0.47
RABGGTA-213ENST00000560127 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
RABGGTA-213ENST00000560127 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-213ENST00000560127 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-213ENST00000560127 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
RABGGTA-213ENST00000560127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.95■□□□□ 0.462e-8■□□□□ 10.7
RABGGTA-213ENST00000560127 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
RABGGTA-213ENST00000560127 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
RABGGTA-213ENST00000560127 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
RABGGTA-213ENST00000560127 GYS1P13807 737 aa17.94■□□□□ 0.46
RABGGTA-213ENST00000560127 PHKG2P15735 406 aa17.94■□□□□ 0.46
RABGGTA-213ENST00000560127 TNS4Q8IZW8 715 aa17.94■□□□□ 0.46
RABGGTA-213ENST00000560127 PRELPP51888 382 aa17.93■□□□□ 0.46
RABGGTA-213ENST00000560127 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
RABGGTA-213ENST00000560127 EYA1Q99502 592 aa17.93■□□□□ 0.46
RABGGTA-213ENST00000560127 ADRA2BP18089 450 aa17.92■□□□□ 0.46
RABGGTA-213ENST00000560127 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
RABGGTA-213ENST00000560127 RRAGCQ9HB90 399 aa17.92■□□□□ 0.46
RABGGTA-213ENST00000560127 PARP3Q9Y6F1 533 aa17.92■□□□□ 0.46
RABGGTA-213ENST00000560127 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
RABGGTA-213ENST00000560127 RC3H1Q5TC82 1133 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-213ENST00000560127 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
RABGGTA-213ENST00000560127 PPM1GO15355 546 aaPredicted RBP17.9■□□□□ 0.46
RABGGTA-213ENST00000560127 RFC4P35249 363 aa17.9■□□□□ 0.46
RABGGTA-213ENST00000560127 RNF181Q9P0P0 153 aa17.9■□□□□ 0.46
RABGGTA-213ENST00000560127 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
RABGGTA-213ENST00000560127 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
RABGGTA-213ENST00000560127 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.45
RABGGTA-213ENST00000560127 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
RABGGTA-213ENST00000560127 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-213ENST00000560127 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-213ENST00000560127 AFDNP55196 1824 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-213ENST00000560127 SMC1BQ8NDV3 1235 aa17.87■□□□□ 0.45
RABGGTA-213ENST00000560127 DDR1Q08345 913 aa17.86■□□□□ 0.45
RABGGTA-213ENST00000560127 ADAMTS7Q9UKP4 1686 aa17.86■□□□□ 0.45
RABGGTA-213ENST00000560127 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
RABGGTA-213ENST00000560127 CHRNA5P30532 468 aa17.85■□□□□ 0.45
RABGGTA-213ENST00000560127 TJP1Q07157 1748 aa17.84■□□□□ 0.45
RABGGTA-213ENST00000560127 FKBP8Q14318 412 aa17.84■□□□□ 0.45
RABGGTA-213ENST00000560127 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-213ENST00000560127 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
RABGGTA-213ENST00000560127 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-213ENST00000560127 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-213ENST00000560127 TIAM2Q8IVF5 1701 aa17.83■□□□□ 0.44
RABGGTA-213ENST00000560127 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-213ENST00000560127 USP42Q9H9J4 1324 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-213ENST00000560127 POLKQ9UBT6 870 aa17.82■□□□□ 0.44
RABGGTA-213ENST00000560127 RASSF7Q02833 373 aa17.81■□□□□ 0.44
RABGGTA-213ENST00000560127 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-213ENST00000560127 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-213ENST00000560127 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-213ENST00000560127 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-213ENST00000560127 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
RABGGTA-213ENST00000560127 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-213ENST00000560127 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-213ENST00000560127 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
RABGGTA-213ENST00000560127 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
RABGGTA-213ENST00000560127 VIRMAQ69YN4 1812 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-213ENST00000560127 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
RABGGTA-213ENST00000560127 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-213ENST00000560127 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-213ENST00000560127 TM4SF1P30408 202 aa17.78■□□□□ 0.44
RABGGTA-213ENST00000560127 CABP4P57796 275 aa17.77■□□□□ 0.44
RABGGTA-213ENST00000560127 LMNB1P20700 586 aa17.76■□□□□ 0.43
RABGGTA-213ENST00000560127 PLEKHO1Q53GL0 409 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-213ENST00000560127 ZNF530Q6P9A1 599 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-213ENST00000560127 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-213ENST00000560127 POTECB2RU33 542 aa17.74■□□□□ 0.43
RABGGTA-213ENST00000560127 FER1L6Q2WGJ9 1857 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms