RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 LARGE2Q8N3Y3 721 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 TPCN2Q8NHX9 752 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 SIRT1Q96EB6 747 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 PRIMPOLQ96LW4 560 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 SFI1A8K8P3 1242 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 GIGYF1O75420 1035 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-209ENST00000559100 LGR5O75473 907 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 ADH1BP00325 375 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 MYCP01106 439 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-209ENST00000559100 ITGB2P05107 769 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 VSIG8P0DPA2 414 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 SEC13P55735 322 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 SWI5Q1ZZU3 235 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 TSGA10IPQ3SY00 556 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 CCDC102BQ68D86 513 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 BPHLQ86WA6 291 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-209ENST00000559100 BAP1Q92560 729 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 CCDC85AQ96PX6 553 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-209ENST00000559100 OCSTAMPQ9BR26 566 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 BCL2L13Q9BXK5 485 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 SLC6A16Q9GZN6 736 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 ANO2Q9NQ90 1003 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 PCDHB11Q9Y5F2 797 aa3.7□□□□□ -1.82
GABPB1-209ENST00000559100 H3BRB1 525 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 PPEF1O14829 653 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-209ENST00000559100 ZPR1O75312 459 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 ERCC3P19447 782 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 FAM69CQ0P6D2 419 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 USP4Q13107 963 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 ZNF211Q13398 564 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-209ENST00000559100 NBPF20Q3BBV1 942 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 PTCRAQ6ISU1 281 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-209ENST00000559100 SH3BP5LQ7L8J4 393 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 GLYCTKQ8IVS8 523 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 PHTF2Q8N3S3 785 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 MKNK1Q9BUB5 465 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 BCL11AQ9H165 835 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 TUT1Q9H6E5 874 aaKnown RBP3.69□□□□□ -1.82
GABPB1-209ENST00000559100 SLAIN2Q9P270 581 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 USP35Q9P2H5 1018 aa3.69□□□□□ -1.82
GABPB1-209ENST00000559100 YBX3P16989 372 aaKnown RBP eCLIP3.68□□□□□ -1.82
GABPB1-209ENST00000559100 MAPK1P28482 360 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 ERFEQ4G0M1 354 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 ZNF511Q8NB15 262 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 GIPC2Q8TF65 315 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 FOXJ1Q92949 421 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 KIAA1024Q9UPX6 916 aa3.68□□□□□ -1.82
GABPB1-209ENST00000559100 RBM47A0AV96 593 aaKnown RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 ANKRD33BA6NCL7 494 aa3.67□□□□□ -1.82
GABPB1-209ENST00000559100 UNCXA6NJT0 531 aa3.67□□□□□ -1.82
GABPB1-209ENST00000559100 ZBTB24O43167 697 aaPredicted RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 FURINP09958 794 aa3.67□□□□□ -1.82
GABPB1-209ENST00000559100 ZNF326Q5BKZ1 582 aaKnown RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 SIX5Q8N196 739 aa3.67□□□□□ -1.82
GABPB1-209ENST00000559100 MRRFQ96E11 262 aaKnown RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 CXXC1Q9P0U4 656 aaPredicted RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 CHIC2Q9UKJ5 165 aa3.67□□□□□ -1.82
GABPB1-209ENST00000559100 FCF1Q9Y324 198 aaKnown RBP3.67□□□□□ -1.82
GABPB1-209ENST00000559100 ZBTB7BO15156 539 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-209ENST00000559100 IGSF3O75054 1194 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 S1PR4O95977 384 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 BAG6P46379 1132 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 ARID5BQ14865 1188 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-209ENST00000559100 TSEN2Q8NCE0 465 aaKnown RBP3.66□□□□□ -1.82
GABPB1-209ENST00000559100 C1orf216Q8TAB5 229 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 GTF3C2Q8WUA4 911 aaPredicted RBP3.66□□□□□ -1.82
GABPB1-209ENST00000559100 VTI1AQ96AJ9 217 aa3.66□□□□□ -1.82
GABPB1-209ENST00000559100 CDV3Q9UKY7 258 aaKnown RBP3.66□□□□□ -1.82
GABPB1-209ENST00000559100 ZNF16P17020 682 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 MTMR3Q13615 1198 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 AAMPQ13685 434 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 NAA30Q147X3 362 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 OCLNQ16625 522 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 VASH1Q7L8A9 365 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 SH3RF1Q7Z6J0 888 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 TMC1Q8TDI8 760 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 SCARF2Q96GP6 870 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 KCTD15Q96SI1 283 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-209ENST00000559100 SEPT3Q9UH03 358 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 EGFL7Q9UHF1 273 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 PCDHGA11Q9Y5H2 935 aa3.65□□□□□ -1.83
GABPB1-209ENST00000559100 TTC24A2A3L6 582 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-209ENST00000559100 C21orf2O43822 256 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 ICMTO60725 284 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 PTCD1O75127 700 aaKnown RBP3.64□□□□□ -1.83
GABPB1-209ENST00000559100 SF3B2Q13435 895 aaKnown RBP3.64□□□□□ -1.83
GABPB1-209ENST00000559100 C4orf48Q5BLP8 95 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 TAS1R3Q7RTX0 852 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 CCDC125Q86Z20 511 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 ZSCAN29Q8IWY8 852 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-209ENST00000559100 SEPT12Q8IYM1 358 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 SVOPQ8N4V2 548 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 GAS2L2Q8NHY3 880 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 CHMP7Q8WUX9 453 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-209ENST00000559100 TRIM52Q96A61 297 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 DCAF5Q96JK2 942 aa3.64□□□□□ -1.83
GABPB1-209ENST00000559100 SHROOM4Q9ULL8 1493 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 ESPNB1AK53 854 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms