RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
CHRNA3-205ENST00000559080 SIK1P57059 783 aa15.61■□□□□ 0.09
CHRNA3-205ENST00000559080 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
CHRNA3-205ENST00000559080 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
CHRNA3-205ENST00000559080 APLP1P51693 650 aa15.6■□□□□ 0.09
CHRNA3-205ENST00000559080 ITPK1Q13572 414 aa15.6■□□□□ 0.09
CHRNA3-205ENST00000559080 TOMM70O94826 608 aa15.58■□□□□ 0.08
CHRNA3-205ENST00000559080 GNPATO15228 680 aa15.57■□□□□ 0.08
CHRNA3-205ENST00000559080 MMP10P09238 476 aa15.57■□□□□ 0.08
CHRNA3-205ENST00000559080 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
CHRNA3-205ENST00000559080 C10orf71Q711Q0 1435 aa15.57■□□□□ 0.08
CHRNA3-205ENST00000559080 EMILIN1Q9Y6C2 1016 aa15.56■□□□□ 0.08
CHRNA3-205ENST00000559080 KDRP35968 1356 aa15.55■□□□□ 0.08
CHRNA3-205ENST00000559080 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
CHRNA3-205ENST00000559080 TGFB2P61812 414 aa15.55■□□□□ 0.08
CHRNA3-205ENST00000559080 NMRK2Q9NPI5 230 aa15.55■□□□□ 0.08
CHRNA3-205ENST00000559080 A0A0G2JLW4 131 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 ATG3Q9NT62 314 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 SPG7Q9UQ90 795 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 BCS1LQ9Y276 419 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
CHRNA3-205ENST00000559080 SLC4A9Q96Q91 983 aa15.53■□□□□ 0.08
CHRNA3-205ENST00000559080 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
CHRNA3-205ENST00000559080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHRNA3-205ENST00000559080 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.08
CHRNA3-205ENST00000559080 PHKG2P15735 406 aa15.52■□□□□ 0.08
CHRNA3-205ENST00000559080 EYA1Q99502 592 aa15.52■□□□□ 0.08
CHRNA3-205ENST00000559080 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
CHRNA3-205ENST00000559080 DPEP1P16444 411 aa15.51■□□□□ 0.07
CHRNA3-205ENST00000559080 KCNA3P22001 575 aa15.51■□□□□ 0.07
CHRNA3-205ENST00000559080 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
CHRNA3-205ENST00000559080 NLGN1Q8N2Q7 840 aa15.51■□□□□ 0.07
CHRNA3-205ENST00000559080 GYS1P13807 737 aa15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 HTRA3P83110 453 aa15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 TRAPPC3LQ5T215 181 aa15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 IFNL2Q8IZJ0 200 aa15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 RBM46Q8TBY0 533 aaKnown RBP15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 RTCBQ9Y3I0 505 aaKnown RBP15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 ADAMTS7Q9UKP4 1686 aa15.5■□□□□ 0.07
CHRNA3-205ENST00000559080 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
CHRNA3-205ENST00000559080 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
CHRNA3-205ENST00000559080 VIRMAQ69YN4 1812 aaKnown RBP15.49■□□□□ 0.07
CHRNA3-205ENST00000559080 TJP1Q07157 1748 aa15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 FCHSD2O94868 740 aa15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 COL13A1Q5TAT6 717 aaPredicted RBP15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 RC3H1Q5TC82 1133 aaKnown RBP15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 KLRG1Q96E93 195 aa15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 POLR3GLQ9BT43 218 aa15.48■□□□□ 0.07
CHRNA3-205ENST00000559080 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 ADRA2BP18089 450 aa15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 C9orf131Q5VYM1 1079 aa15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 PLEKHG2Q9H7P9 1386 aa15.47■□□□□ 0.07
CHRNA3-205ENST00000559080 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
CHRNA3-205ENST00000559080 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
CHRNA3-205ENST00000559080 DLEC1Q9Y238 1755 aa15.46■□□□□ 0.07
CHRNA3-205ENST00000559080 SCN11AQ9UI33 1791 aa15.45■□□□□ 0.06
CHRNA3-205ENST00000559080 FSTL1Q12841 308 aa15.45■□□□□ 0.06
CHRNA3-205ENST00000559080 DCAF5Q96JK2 942 aa15.45■□□□□ 0.06
CHRNA3-205ENST00000559080 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
CHRNA3-205ENST00000559080 ERVV-2B6SEH9 535 aa15.44■□□□□ 0.06
CHRNA3-205ENST00000559080 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
CHRNA3-205ENST00000559080 PARP3Q9Y6F1 533 aa15.44■□□□□ 0.06
CHRNA3-205ENST00000559080 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
CHRNA3-205ENST00000559080 RFC4P35249 363 aa15.43■□□□□ 0.06
CHRNA3-205ENST00000559080 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
CHRNA3-205ENST00000559080 PIM2Q9P1W9 311 aa15.43■□□□□ 0.06
CHRNA3-205ENST00000559080 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
CHRNA3-205ENST00000559080 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
CHRNA3-205ENST00000559080 PCNTO95613 3336 aa15.42■□□□□ 0.06
CHRNA3-205ENST00000559080 TIAM2Q8IVF5 1701 aa15.42■□□□□ 0.06
CHRNA3-205ENST00000559080 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
CHRNA3-205ENST00000559080 DDR1Q08345 913 aa15.41■□□□□ 0.06
CHRNA3-205ENST00000559080 RRAGCQ9HB90 399 aa15.41■□□□□ 0.06
CHRNA3-205ENST00000559080 RNF181Q9P0P0 153 aa15.41■□□□□ 0.06
CHRNA3-205ENST00000559080 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
CHRNA3-205ENST00000559080 FKBP8Q14318 412 aa15.4■□□□□ 0.06
CHRNA3-205ENST00000559080 SRP68Q9UHB9 627 aaKnown RBP15.4■□□□□ 0.06
CHRNA3-205ENST00000559080 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
CHRNA3-205ENST00000559080 CHRNA5P30532 468 aa15.39■□□□□ 0.05
CHRNA3-205ENST00000559080 CRKLP46109 303 aaKnown RBP15.39■□□□□ 0.05
CHRNA3-205ENST00000559080 DALRD3Q5D0E6 543 aaKnown RBP15.39■□□□□ 0.05
CHRNA3-205ENST00000559080 HSP90AB1P08238 724 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-205ENST00000559080 TM4SF1P30408 202 aa15.37■□□□□ 0.05
CHRNA3-205ENST00000559080 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 CAPN15O75808 1086 aa15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 PRELPP51888 382 aa15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 CABP4P57796 275 aa15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 TNS4Q8IZW8 715 aa15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
CHRNA3-205ENST00000559080 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
CHRNA3-205ENST00000559080 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
CHRNA3-205ENST00000559080 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
CHRNA3-205ENST00000559080 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms