RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 TMF1P82094 1093 aa12.38□□□□□ -0.43
RORA-208ENST00000558904 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
RORA-208ENST00000558904 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
RORA-208ENST00000558904 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
RORA-208ENST00000558904 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
RORA-208ENST00000558904 GNPATO15228 680 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 CYP27B1O15528 508 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
RORA-208ENST00000558904 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 PIGBQ92521 554 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
RORA-208ENST00000558904 UBR3Q6ZT12 1888 aa12.37□□□□□ -0.43
RORA-208ENST00000558904 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
RORA-208ENST00000558904 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
RORA-208ENST00000558904 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
RORA-208ENST00000558904 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
RORA-208ENST00000558904 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
RORA-208ENST00000558904 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 FBLN1P23142 703 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 HTRA3P83110 453 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
RORA-208ENST00000558904 INSRP06213 1382 aa12.34□□□□□ -0.43
RORA-208ENST00000558904 DPEP1P16444 411 aa12.34□□□□□ -0.43
RORA-208ENST00000558904 RRS1Q15050 365 aaKnown RBP12.34□□□□□ -0.43
RORA-208ENST00000558904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.34□□□□□ -0.43
RORA-208ENST00000558904 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
RORA-208ENST00000558904 RFC4P35249 363 aa12.33□□□□□ -0.44
RORA-208ENST00000558904 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
RORA-208ENST00000558904 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
RORA-208ENST00000558904 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
RORA-208ENST00000558904 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
RORA-208ENST00000558904 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
RORA-208ENST00000558904 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
RORA-208ENST00000558904 HSPA1AP0DMV8 641 aaKnown RBP12.32□□□□□ -0.44
RORA-208ENST00000558904 HSPA1BP0DMV9 641 aaKnown RBP12.32□□□□□ -0.44
RORA-208ENST00000558904 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
RORA-208ENST00000558904 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
RORA-208ENST00000558904 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
RORA-208ENST00000558904 ITGB4P16144 1822 aa12.32□□□□□ -0.44
RORA-208ENST00000558904 FLT4P35916 1363 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 FYB1O15117 783 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
RORA-208ENST00000558904 ITPK1Q13572 414 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
RORA-208ENST00000558904 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
RORA-208ENST00000558904 KCNA3P22001 575 aa12.3□□□□□ -0.44
RORA-208ENST00000558904 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
RORA-208ENST00000558904 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
RORA-208ENST00000558904 RPS6KA4O75676 772 aa12.29□□□□□ -0.44
RORA-208ENST00000558904 GYS1P13807 737 aa12.29□□□□□ -0.44
RORA-208ENST00000558904 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
RORA-208ENST00000558904 GGNBP2Q9H3C7 697 aa12.29□□□□□ -0.44
RORA-208ENST00000558904 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
RORA-208ENST00000558904 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
RORA-208ENST00000558904 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.44
RORA-208ENST00000558904 TNRC6CQ9HCJ0 1690 aaKnown RBP12.27□□□□□ -0.45
RORA-208ENST00000558904 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
RORA-208ENST00000558904 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
RORA-208ENST00000558904 KIAA1551Q9HCM1 1747 aa12.27□□□□□ -0.45
RORA-208ENST00000558904 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
RORA-208ENST00000558904 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
RORA-208ENST00000558904 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
RORA-208ENST00000558904 PHKG2P15735 406 aa12.26□□□□□ -0.45
RORA-208ENST00000558904 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
RORA-208ENST00000558904 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
RORA-208ENST00000558904 SLC34A2O95436 690 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 LMNB1P20700 586 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 POLA2Q14181 598 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
RORA-208ENST00000558904 PCNTO95613 3336 aa12.24□□□□□ -0.45
RORA-208ENST00000558904 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
RORA-208ENST00000558904 CDCA8Q53HL2 280 aa12.24□□□□□ -0.45
RORA-208ENST00000558904 TESK2Q96S53 571 aa12.24□□□□□ -0.45
RORA-208ENST00000558904 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
RORA-208ENST00000558904 PRDM10Q9NQV6 1147 aa12.23□□□□□ -0.45
RORA-208ENST00000558904 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
RORA-208ENST00000558904 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
RORA-208ENST00000558904 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
RORA-208ENST00000558904 EYA1Q99502 592 aa12.22□□□□□ -0.45
RORA-208ENST00000558904 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
RORA-208ENST00000558904 SBF1O95248 1867 aa12.22□□□□□ -0.45
RORA-208ENST00000558904 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
RORA-208ENST00000558904 KDRP35968 1356 aa12.21□□□□□ -0.45
RORA-208ENST00000558904 CHRNA5P30532 468 aa12.21□□□□□ -0.45
RORA-208ENST00000558904 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
RORA-208ENST00000558904 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
RORA-208ENST00000558904 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
RORA-208ENST00000558904 ZPR1O75312 459 aa12.2□□□□□ -0.46
RORA-208ENST00000558904 TM4SF1P30408 202 aa12.2□□□□□ -0.46
RORA-208ENST00000558904 CABP4P57796 275 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms