RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
LRRC28-208ENST00000558771 TNS1Q9HBL0 1735 aaKnown RBP8.18□□□□□ -1.1
LRRC28-208ENST00000558771 GNPATO15228 680 aa8.18□□□□□ -1.1
LRRC28-208ENST00000558771 BCAMP50895 628 aa8.18□□□□□ -1.1
LRRC28-208ENST00000558771 EZH2Q15910 746 aaKnown RBP8.18□□□□□ -1.1
LRRC28-208ENST00000558771 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-208ENST00000558771 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
LRRC28-208ENST00000558771 DISP2A7MBM2 1401 aa8.18□□□□□ -1.1
LRRC28-208ENST00000558771 FECHP22830 423 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 SIRT1Q96EB6 747 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 ADGRG1Q9Y653 693 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 ANKRD30BQ9BXX2 1392 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 SPATA31E1Q6ZUB1 1445 aa8.17□□□□□ -1.1
LRRC28-208ENST00000558771 YY1P25490 414 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 COL14A1Q05707 1796 aaKnown RBP8.16□□□□□ -1.1
LRRC28-208ENST00000558771 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 RBM46Q8TBY0 533 aaKnown RBP8.16□□□□□ -1.1
LRRC28-208ENST00000558771 THSD7AQ9UPZ6 1657 aa8.16□□□□□ -1.1
LRRC28-208ENST00000558771 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-208ENST00000558771 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
LRRC28-208ENST00000558771 CAMKK2Q96RR4 588 aa8.15□□□□□ -1.1
LRRC28-208ENST00000558771 ALS2Q96Q42 1657 aa8.14□□□□□ -1.11
LRRC28-208ENST00000558771 ADGRB2O60241 1585 aa8.14□□□□□ -1.11
LRRC28-208ENST00000558771 TRIM37O94972 964 aa8.14□□□□□ -1.11
LRRC28-208ENST00000558771 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
LRRC28-208ENST00000558771 C14orf93Q9H972 538 aaKnown RBP8.14□□□□□ -1.11
LRRC28-208ENST00000558771 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 DHX57Q6P158 1386 aaKnown RBP8.13□□□□□ -1.11
LRRC28-208ENST00000558771 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 APBA3O96018 575 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 OATP04181 439 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 TSR3Q9UJK0 312 aaKnown RBP8.13□□□□□ -1.11
LRRC28-208ENST00000558771 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
LRRC28-208ENST00000558771 RREB1Q92766 1687 aa8.12□□□□□ -1.11
LRRC28-208ENST00000558771 SPATA31A1Q5TZJ5 1347 aa8.12□□□□□ -1.11
LRRC28-208ENST00000558771 PPP4CP60510 307 aa8.12□□□□□ -1.11
LRRC28-208ENST00000558771 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
LRRC28-208ENST00000558771 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
LRRC28-208ENST00000558771 NUP188Q5SRE5 1749 aa8.12□□□□□ -1.11
LRRC28-208ENST00000558771 GPRASP1Q5JY77 1395 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 PARD3Q8TEW0 1356 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 ACIN1Q9UKV3 1341 aaKnown RBP8.11□□□□□ -1.11
LRRC28-208ENST00000558771 RCCD1A6NED2 376 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 DNAJB2P25686 324 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 HIRIP3Q9BW71 556 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-208ENST00000558771 POGKQ9P215 609 aa8.11□□□□□ -1.11
LRRC28-208ENST00000558771 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 DLC1Q96QB1 1528 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 NBPF8Q3BBV2 869 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-208ENST00000558771 UTRNP46939 3433 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
LRRC28-208ENST00000558771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
LRRC28-208ENST00000558771 NYAP1Q6ZVC0 841 aa8.09□□□□□ -1.11
LRRC28-208ENST00000558771 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
LRRC28-208ENST00000558771 MPHOSPH9Q99550 1183 aa8.09□□□□□ -1.11
LRRC28-208ENST00000558771 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
LRRC28-208ENST00000558771 SPON1Q9HCB6 807 aa8.09□□□□□ -1.11
LRRC28-208ENST00000558771 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
LRRC28-208ENST00000558771 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 MINK1Q8N4C8 1332 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-208ENST00000558771 PHRF1Q9P1Y6 1649 aaKnown RBP8.08□□□□□ -1.12
LRRC28-208ENST00000558771 KCNQ2O43526 872 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 ZC3H6P61129 1189 aaKnown RBP8.08□□□□□ -1.12
LRRC28-208ENST00000558771 PDE3BQ13370 1112 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 SLF2Q8IX21 1173 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 NGDNQ8NEJ9 315 aaKnown RBP8.08□□□□□ -1.12
LRRC28-208ENST00000558771 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 TRAK1Q9UPV9 953 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 EIF3AQ14152 1382 aaKnown RBP8.08□□□□□ -1.12
LRRC28-208ENST00000558771 NINLQ9Y2I6 1382 aa8.08□□□□□ -1.12
LRRC28-208ENST00000558771 ADGRB1O14514 1584 aa8.07□□□□□ -1.12
LRRC28-208ENST00000558771 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-208ENST00000558771 RNF40O75150 1001 aa8.07□□□□□ -1.12
LRRC28-208ENST00000558771 BARGINQ6ZT62 677 aa8.07□□□□□ -1.12
LRRC28-208ENST00000558771 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
LRRC28-208ENST00000558771 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
LRRC28-208ENST00000558771 IRF6O14896 467 aa8.06□□□□□ -1.12
LRRC28-208ENST00000558771 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
LRRC28-208ENST00000558771 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
LRRC28-208ENST00000558771 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
LRRC28-208ENST00000558771 EVA1CP58658 441 aa8.05□□□□□ -1.12
LRRC28-208ENST00000558771 LARP1Q6PKG0 1096 aaKnown RBP8.05□□□□□ -1.12
LRRC28-208ENST00000558771 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
LRRC28-208ENST00000558771 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
LRRC28-208ENST00000558771 NECTIN2Q92692 538 aa8.05□□□□□ -1.12
LRRC28-208ENST00000558771 ATP7BP35670 1465 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms