RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
TMED3-205ENST00000558562 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
TMED3-205ENST00000558562 APLP1P51693 650 aa18.16■□□□□ 0.5
TMED3-205ENST00000558562 ITPK1Q13572 414 aa18.16■□□□□ 0.5
TMED3-205ENST00000558562 RALBP1Q15311 655 aa18.16■□□□□ 0.5
TMED3-205ENST00000558562 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
TMED3-205ENST00000558562 MMP10P09238 476 aa18.15■□□□□ 0.5
TMED3-205ENST00000558562 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
TMED3-205ENST00000558562 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
TMED3-205ENST00000558562 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
TMED3-205ENST00000558562 DNAJC5GQ8N7S2 189 aa18.14■□□□□ 0.49
TMED3-205ENST00000558562 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
TMED3-205ENST00000558562 EMILIN1Q9Y6C2 1016 aa18.14■□□□□ 0.49
TMED3-205ENST00000558562 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.49
TMED3-205ENST00000558562 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.49
TMED3-205ENST00000558562 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
TMED3-205ENST00000558562 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
TMED3-205ENST00000558562 NKX1-1Q15270 411 aaPredicted RBP18.13■□□□□ 0.49
TMED3-205ENST00000558562 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
TMED3-205ENST00000558562 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
TMED3-205ENST00000558562 KIF20BQ96Q89 1820 aa18.12■□□□□ 0.49
TMED3-205ENST00000558562 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
TMED3-205ENST00000558562 TOMM70O94826 608 aa18.12■□□□□ 0.49
TMED3-205ENST00000558562 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
TMED3-205ENST00000558562 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
TMED3-205ENST00000558562 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
TMED3-205ENST00000558562 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
TMED3-205ENST00000558562 CCDC184Q52MB2 194 aa18.11■□□□□ 0.49
TMED3-205ENST00000558562 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
TMED3-205ENST00000558562 KIAA1551Q9HCM1 1747 aa18.11■□□□□ 0.49
TMED3-205ENST00000558562 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
TMED3-205ENST00000558562 TGFB2P61812 414 aa18.09■□□□□ 0.49
TMED3-205ENST00000558562 HTRA3P83110 453 aa18.09■□□□□ 0.49
TMED3-205ENST00000558562 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
TMED3-205ENST00000558562 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
TMED3-205ENST00000558562 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
TMED3-205ENST00000558562 DPEP1P16444 411 aa18.08■□□□□ 0.48
TMED3-205ENST00000558562 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
TMED3-205ENST00000558562 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
TMED3-205ENST00000558562 FCHSD2O94868 740 aa18.07■□□□□ 0.48
TMED3-205ENST00000558562 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
TMED3-205ENST00000558562 EYA1Q99502 592 aa18.07■□□□□ 0.48
TMED3-205ENST00000558562 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
TMED3-205ENST00000558562 PHKG2P15735 406 aa18.06■□□□□ 0.48
TMED3-205ENST00000558562 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
TMED3-205ENST00000558562 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
TMED3-205ENST00000558562 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
TMED3-205ENST00000558562 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
TMED3-205ENST00000558562 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
TMED3-205ENST00000558562 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
TMED3-205ENST00000558562 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
TMED3-205ENST00000558562 WDR90Q96KV7 1748 aa18.04■□□□□ 0.48
TMED3-205ENST00000558562 C9orf131Q5VYM1 1079 aa18.04■□□□□ 0.48
TMED3-205ENST00000558562 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
TMED3-205ENST00000558562 CCDC87Q9NVE4 849 aa18.04■□□□□ 0.48
TMED3-205ENST00000558562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.04■□□□□ 0.48
TMED3-205ENST00000558562 GYS1P13807 737 aa18.03■□□□□ 0.48
TMED3-205ENST00000558562 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
TMED3-205ENST00000558562 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
TMED3-205ENST00000558562 KDRP35968 1356 aa18.03■□□□□ 0.48
TMED3-205ENST00000558562 PCNTO95613 3336 aa18.02■□□□□ 0.48
TMED3-205ENST00000558562 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
TMED3-205ENST00000558562 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
TMED3-205ENST00000558562 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
TMED3-205ENST00000558562 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
TMED3-205ENST00000558562 CAPN15O75808 1086 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 KCNA3P22001 575 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 RFC4P35249 363 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 KLRG1Q96E93 195 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
TMED3-205ENST00000558562 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
TMED3-205ENST00000558562 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 ADRA2BP18089 450 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
TMED3-205ENST00000558562 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 PIM2Q9P1W9 311 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
TMED3-205ENST00000558562 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
TMED3-205ENST00000558562 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
TMED3-205ENST00000558562 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
TMED3-205ENST00000558562 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMED3-205ENST00000558562 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
TMED3-205ENST00000558562 JMYQ8N9B5 988 aa17.97■□□□□ 0.47
TMED3-205ENST00000558562 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
TMED3-205ENST00000558562 ARFGEF1Q9Y6D6 1849 aa17.97■□□□□ 0.47
TMED3-205ENST00000558562 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
TMED3-205ENST00000558562 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
TMED3-205ENST00000558562 FSTL1Q12841 308 aa17.96■□□□□ 0.47
TMED3-205ENST00000558562 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
TMED3-205ENST00000558562 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
TMED3-205ENST00000558562 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
TMED3-205ENST00000558562 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
TMED3-205ENST00000558562 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
TMED3-205ENST00000558562 CHRNA5P30532 468 aa17.95■□□□□ 0.46
TMED3-205ENST00000558562 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
TMED3-205ENST00000558562 CABP4P57796 275 aa17.94■□□□□ 0.46
TMED3-205ENST00000558562 DDR1Q08345 913 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms