RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CABP4P57796 275 aa21.16■□□□□ 0.98
TPM1-211ENST00000558314 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
TPM1-211ENST00000558314 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
TPM1-211ENST00000558314 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
TPM1-211ENST00000558314 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
TPM1-211ENST00000558314 WWC3Q9ULE0 1092 aa21.15■□□□□ 0.98
TPM1-211ENST00000558314 MTHFSP49914 203 aa21.14■□□□□ 0.97
TPM1-211ENST00000558314 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
TPM1-211ENST00000558314 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
TPM1-211ENST00000558314 ERVV-2B6SEH9 535 aa21.12■□□□□ 0.97
TPM1-211ENST00000558314 YBX3P16989 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
TPM1-211ENST00000558314 SSFA2P28290 1259 aa21.12■□□□□ 0.97
TPM1-211ENST00000558314 AMER1Q5JTC6 1135 aaPredicted RBP21.11■□□□□ 0.97
TPM1-211ENST00000558314 UTRNP46939 3433 aa21.11■□□□□ 0.97
TPM1-211ENST00000558314 PTCD1O75127 700 aaKnown RBP21.1■□□□□ 0.97
TPM1-211ENST00000558314 IL13P35225 146 aa21.1■□□□□ 0.97
TPM1-211ENST00000558314 CHD4Q14839 1912 aa21.1■□□□□ 0.97
TPM1-211ENST00000558314 HMOX1P09601 288 aa21.09■□□□□ 0.97
TPM1-211ENST00000558314 CD2APQ9Y5K6 639 aa21.09■□□□□ 0.97
TPM1-211ENST00000558314 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
TPM1-211ENST00000558314 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
TPM1-211ENST00000558314 GRIN3BO60391 1043 aa21.08■□□□□ 0.97
TPM1-211ENST00000558314 RTCBQ9Y3I0 505 aaKnown RBP21.08■□□□□ 0.97
TPM1-211ENST00000558314 TRAPPC3LQ5T215 181 aa21.07■□□□□ 0.96
TPM1-211ENST00000558314 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
TPM1-211ENST00000558314 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
TPM1-211ENST00000558314 PLEKHG2Q9H7P9 1386 aa21.06■□□□□ 0.96
TPM1-211ENST00000558314 KDRP35968 1356 aa21.05■□□□□ 0.96
TPM1-211ENST00000558314 MMP10P09238 476 aa21.04■□□□□ 0.96
TPM1-211ENST00000558314 DIAPH1O60610 1272 aaKnown RBP21.02■□□□□ 0.96
TPM1-211ENST00000558314 RFC4P35249 363 aa21.02■□□□□ 0.96
TPM1-211ENST00000558314 ARHGEF1Q92888 912 aaKnown RBP21.02■□□□□ 0.96
TPM1-211ENST00000558314 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
TPM1-211ENST00000558314 PER1O15534 1290 aaPredicted RBP21.01■□□□□ 0.95
TPM1-211ENST00000558314 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
TPM1-211ENST00000558314 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
TPM1-211ENST00000558314 CNTNAP4Q9C0A0 1308 aa21■□□□□ 0.95
TPM1-211ENST00000558314 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
TPM1-211ENST00000558314 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
TPM1-211ENST00000558314 RC3H1Q5TC82 1133 aaKnown RBP20.99■□□□□ 0.95
TPM1-211ENST00000558314 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
TPM1-211ENST00000558314 NLGN1Q8N2Q7 840 aa20.98■□□□□ 0.95
TPM1-211ENST00000558314 RNMTO43148 476 aaKnown RBP20.97■□□□□ 0.95
TPM1-211ENST00000558314 SLC39A6Q13433 755 aa20.97■□□□□ 0.95
TPM1-211ENST00000558314 MTHFSDQ2M296 383 aaKnown RBP20.97■□□□□ 0.95
TPM1-211ENST00000558314 SLC52A2Q9HAB3 445 aa20.97■□□□□ 0.95
TPM1-211ENST00000558314 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
TPM1-211ENST00000558314 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
TPM1-211ENST00000558314 GYS1P13807 737 aa20.96■□□□□ 0.95
TPM1-211ENST00000558314 ADRA2BP18089 450 aa20.96■□□□□ 0.95
TPM1-211ENST00000558314 ZNF526Q8TF50 670 aaPredicted RBP20.96■□□□□ 0.95
TPM1-211ENST00000558314 SRP68Q9UHB9 627 aaKnown RBP20.96■□□□□ 0.95
TPM1-211ENST00000558314 PARP3Q9Y6F1 533 aa20.96■□□□□ 0.95
TPM1-211ENST00000558314 C1QTNF8P60827 252 aa20.95■□□□□ 0.94
TPM1-211ENST00000558314 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
TPM1-211ENST00000558314 CICQ96RK0 1608 aaPredicted RBP20.94■□□□□ 0.94
TPM1-211ENST00000558314 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
TPM1-211ENST00000558314 COL5A3P25940 1745 aaPredicted RBP20.93■□□□□ 0.94
TPM1-211ENST00000558314 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
TPM1-211ENST00000558314 BCS1LQ9Y276 419 aa20.93■□□□□ 0.94
TPM1-211ENST00000558314 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
TPM1-211ENST00000558314 SCN11AQ9UI33 1791 aa20.92■□□□□ 0.94
TPM1-211ENST00000558314 ZNF831Q5JPB2 1677 aa20.9■□□□□ 0.94
TPM1-211ENST00000558314 FKBP8Q14318 412 aa20.9■□□□□ 0.94
TPM1-211ENST00000558314 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
TPM1-211ENST00000558314 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
TPM1-211ENST00000558314 ZPR1O75312 459 aa20.89■□□□□ 0.93
TPM1-211ENST00000558314 DPEP1P16444 411 aa20.89■□□□□ 0.93
TPM1-211ENST00000558314 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
TPM1-211ENST00000558314 GPBP1L1Q9HC44 474 aaPredicted RBP20.89■□□□□ 0.93
TPM1-211ENST00000558314 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
TPM1-211ENST00000558314 TJP1Q07157 1748 aa20.88■□□□□ 0.93
TPM1-211ENST00000558314 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
TPM1-211ENST00000558314 USP42Q9H9J4 1324 aaKnown RBP20.87■□□□□ 0.93
TPM1-211ENST00000558314 FCHSD2O94868 740 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 TGFB2P61812 414 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 TEFQ10587 303 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 USPL1Q5W0Q7 1092 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
TPM1-211ENST00000558314 CANXP27824 592 aaKnown RBP20.86■□□□□ 0.93
TPM1-211ENST00000558314 ARHGAP27Q6ZUM4 889 aa20.86■□□□□ 0.93
TPM1-211ENST00000558314 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
TPM1-211ENST00000558314 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
TPM1-211ENST00000558314 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
TPM1-211ENST00000558314 GNAT3A8MTJ3 354 aa20.85■□□□□ 0.93
TPM1-211ENST00000558314 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
TPM1-211ENST00000558314 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
TPM1-211ENST00000558314 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
TPM1-211ENST00000558314 COL3A1P02461 1466 aaPredicted RBP20.85■□□□□ 0.93
TPM1-211ENST00000558314 MRC1P22897 1456 aa20.84■□□□□ 0.93
TPM1-211ENST00000558314 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
TPM1-211ENST00000558314 DDR1Q08345 913 aa20.84■□□□□ 0.93
TPM1-211ENST00000558314 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.93
TPM1-211ENST00000558314 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
TPM1-211ENST00000558314 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
TPM1-211ENST00000558314 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
TPM1-211ENST00000558314 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
TPM1-211ENST00000558314 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
TPM1-211ENST00000558314 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms