RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 ASXL1Q8IXJ9 1541 aa10.16□□□□□ -0.78
TRPM1-206ENST00000558212 EP400Q96L91 3159 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 BCAMP50895 628 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 APLP1P51693 650 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 RRP7BPQ9NSQ0 103 aa10.15□□□□□ -0.78
TRPM1-206ENST00000558212 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
TRPM1-206ENST00000558212 SALL2Q9Y467 1007 aaPredicted RBP10.15□□□□□ -0.78
TRPM1-206ENST00000558212 RPRD2Q5VT52 1461 aaKnown RBP10.15□□□□□ -0.78
TRPM1-206ENST00000558212 NHSL1Q5SYE7 1610 aa10.15□□□□□ -0.79
TRPM1-206ENST00000558212 MYO5BQ9ULV0 1848 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
TRPM1-206ENST00000558212 DESI1Q6ICB0 168 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 RETREG3Q86VR2 466 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRPM1-206ENST00000558212 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
TRPM1-206ENST00000558212 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
TRPM1-206ENST00000558212 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 TRIM34Q9BYJ4 488 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
TRPM1-206ENST00000558212 GCC2Q8IWJ2 1684 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 ABCC5O15440 1437 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 ADAMTS13Q76LX8 1427 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
TRPM1-206ENST00000558212 SYMPKQ92797 1274 aaKnown RBP10.13□□□□□ -0.79
TRPM1-206ENST00000558212 WNT2BQ93097 391 aa10.13□□□□□ -0.79
TRPM1-206ENST00000558212 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
TRPM1-206ENST00000558212 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
TRPM1-206ENST00000558212 TMEM131LA2VDJ0 1609 aa10.13□□□□□ -0.79
TRPM1-206ENST00000558212 PNPLA6Q8IY17 1366 aa10.13□□□□□ -0.79
TRPM1-206ENST00000558212 TRPM2O94759 1503 aa10.12□□□□□ -0.79
TRPM1-206ENST00000558212 PPP4CP60510 307 aa10.12□□□□□ -0.79
TRPM1-206ENST00000558212 Q3C1V9 767 aa10.12□□□□□ -0.79
TRPM1-206ENST00000558212 TBC1D2BQ9UPU7 963 aa10.12□□□□□ -0.79
TRPM1-206ENST00000558212 DAPK1P53355 1430 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 MST1RQ04912 1400 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 PRR7Q8TB68 274 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 ANKRD30AQ9BXX3 1397 aa10.11□□□□□ -0.79
TRPM1-206ENST00000558212 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
TRPM1-206ENST00000558212 RNF19BQ6ZMZ0 732 aa10.1□□□□□ -0.79
TRPM1-206ENST00000558212 STAC3Q96MF2 364 aa10.1□□□□□ -0.79
TRPM1-206ENST00000558212 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
TRPM1-206ENST00000558212 PTPN23Q9H3S7 1636 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 BLOC1S3Q6QNY0 202 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 PRM3Q9NNZ6 103 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
TRPM1-206ENST00000558212 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
TRPM1-206ENST00000558212 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
TRPM1-206ENST00000558212 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
TRPM1-206ENST00000558212 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
TRPM1-206ENST00000558212 IRF5Q13568 498 aa10.08□□□□□ -0.8
TRPM1-206ENST00000558212 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
TRPM1-206ENST00000558212 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
TRPM1-206ENST00000558212 UNC13BO14795 1591 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
TRPM1-206ENST00000558212 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
TRPM1-206ENST00000558212 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 USP21Q9UK80 565 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 LRP5O75197 1615 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 ATRNO75882 1429 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
TRPM1-206ENST00000558212 ADAMTS2O95450 1211 aa10.06□□□□□ -0.8
TRPM1-206ENST00000558212 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
TRPM1-206ENST00000558212 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
TRPM1-206ENST00000558212 LAMC1P11047 1609 aa10.06□□□□□ -0.8
TRPM1-206ENST00000558212 ADGRL3Q9HAR2 1447 aa10.06□□□□□ -0.8
TRPM1-206ENST00000558212 ABL2P42684 1182 aa10.05□□□□□ -0.8
TRPM1-206ENST00000558212 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
TRPM1-206ENST00000558212 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
TRPM1-206ENST00000558212 NR1I2O75469 434 aa10.04□□□□□ -0.8
TRPM1-206ENST00000558212 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
TRPM1-206ENST00000558212 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
TRPM1-206ENST00000558212 DDX17Q92841 729 aaKnown RBP10.04□□□□□ -0.8
TRPM1-206ENST00000558212 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
TRPM1-206ENST00000558212 POTEMA6NI47 508 aa10.03□□□□□ -0.8
TRPM1-206ENST00000558212 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
TRPM1-206ENST00000558212 TSC1Q92574 1164 aa10.03□□□□□ -0.8
TRPM1-206ENST00000558212 COL22A1Q8NFW1 1626 aaPredicted RBP10.03□□□□□ -0.8
TRPM1-206ENST00000558212 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
TRPM1-206ENST00000558212 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
TRPM1-206ENST00000558212 ANKRD50Q9ULJ7 1429 aa10.02□□□□□ -0.81
TRPM1-206ENST00000558212 MSS51Q4VC12 460 aa10.02□□□□□ -0.81
TRPM1-206ENST00000558212 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
TRPM1-206ENST00000558212 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
TRPM1-206ENST00000558212 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
TRPM1-206ENST00000558212 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.81
TRPM1-206ENST00000558212 POM121CA8CG34 1229 aa10.01□□□□□ -0.81
TRPM1-206ENST00000558212 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
TRPM1-206ENST00000558212 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
TRPM1-206ENST00000558212 E9PCH4 1651 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms