RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 DACT1Q9NYF0 836 aa13.56□□□□□ -0.24
RPGRIP1-213ENST00000557771 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
RPGRIP1-213ENST00000557771 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
RPGRIP1-213ENST00000557771 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 ABCC2Q92887 1545 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 USP27XA6NNY8 438 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 SMC2O95347 1197 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 SYT1P21579 422 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
RPGRIP1-213ENST00000557771 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 MYO1CO00159 1063 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 KRT85P78386 507 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 F13A1P00488 732 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 ZSWIM4Q9H7M6 989 aa13.54□□□□□ -0.24
RPGRIP1-213ENST00000557771 ZNF75DP51815 510 aa13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 GJB2P29033 226 aa13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 TTC31Q49AM3 519 aaPredicted RBP13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPGRIP1-213ENST00000557771 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 DNAI1Q9UI46 699 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.24
RPGRIP1-213ENST00000557771 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 NECAB1Q8N987 351 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 IL1RAPL2Q9NP60 686 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 FBLN1P23142 703 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 CASQ1P31415 396 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 CYP2C19P33261 490 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 STK3Q13188 491 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.25
RPGRIP1-213ENST00000557771 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 CLCN6P51797 869 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 FAM193AP78312 1265 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 ST5P78524 1137 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 E9PCH4 1651 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 LIG1P18858 919 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 EP400NLQ6ZTU2 488 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
RPGRIP1-213ENST00000557771 A0A087WWV3 80 aa13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 EFCC1Q9HA90 598 aa13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 PNMA6AP0CW24 399 aaPredicted RBP13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 MYCBPQ99417 103 aaPredicted RBP13.5□□□□□ -0.25
RPGRIP1-213ENST00000557771 PHACTR2O75167 634 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 PDE1AP54750 535 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 MCM6Q14566 821 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 SYCP1Q15431 976 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 ICE2Q659A1 982 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 MEIS3Q99687 375 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 H3BQV1 296 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 GNAI1P63096 354 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 EPC1Q9H2F5 836 aa13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 RRP15Q9Y3B9 282 aaKnown RBP13.49□□□□□ -0.25
RPGRIP1-213ENST00000557771 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 LCMT1Q9UIC8 334 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 AK2P54819 239 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 LIMCH1Q9UPQ0 1083 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
RPGRIP1-213ENST00000557771 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
RPGRIP1-213ENST00000557771 VAMP4O75379 141 aa13.47□□□□□ -0.25
RPGRIP1-213ENST00000557771 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
RPGRIP1-213ENST00000557771 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
RPGRIP1-213ENST00000557771 TCEANC2Q96MN5 208 aa13.47□□□□□ -0.25
RPGRIP1-213ENST00000557771 VPS18Q9P253 973 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms