RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
PRKCH-225ENST00000557559 SIN3AQ96ST3 1273 aa10.29□□□□□ -0.76
PRKCH-225ENST00000557559 WWC3Q9ULE0 1092 aa10.29□□□□□ -0.76
PRKCH-225ENST00000557559 CYP27B1O15528 508 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 MMP10P09238 476 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 FSTL1Q12841 308 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 ZNF831Q5JPB2 1677 aa10.28□□□□□ -0.76
PRKCH-225ENST00000557559 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
PRKCH-225ENST00000557559 N4BP2Q86UW6 1770 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-225ENST00000557559 NCAPD2Q15021 1401 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-225ENST00000557559 AMIGO3Q86WK7 504 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 PIGBQ92521 554 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 KDM2BQ8NHM5 1336 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 C4AP0C0L4 1744 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.77
PRKCH-225ENST00000557559 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
PRKCH-225ENST00000557559 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
PRKCH-225ENST00000557559 BRCA1P38398 1863 aaKnown RBP10.26□□□□□ -0.77
PRKCH-225ENST00000557559 FBLN1P23142 703 aa10.26□□□□□ -0.77
PRKCH-225ENST00000557559 JMYQ8N9B5 988 aa10.26□□□□□ -0.77
PRKCH-225ENST00000557559 FYB1O15117 783 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 FCHSD2O94868 740 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 HSP90AB2PQ58FF8 381 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 ARHGAP27Q6ZUM4 889 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 TESK2Q96S53 571 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 GGNBP2Q9H3C7 697 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 NMRK2Q9NPI5 230 aa10.25□□□□□ -0.77
PRKCH-225ENST00000557559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRKCH-225ENST00000557559 RTCBQ9Y3I0 505 aaKnown RBP10.25□□□□□ -0.77
PRKCH-225ENST00000557559 TMF1P82094 1093 aa10.24□□□□□ -0.77
PRKCH-225ENST00000557559 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
PRKCH-225ENST00000557559 TNS4Q8IZW8 715 aa10.24□□□□□ -0.77
PRKCH-225ENST00000557559 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
PRKCH-225ENST00000557559 KDRP35968 1356 aa10.24□□□□□ -0.77
PRKCH-225ENST00000557559 A0A0G2JLW4 131 aa10.23□□□□□ -0.77
PRKCH-225ENST00000557559 ITPK1Q13572 414 aa10.23□□□□□ -0.77
PRKCH-225ENST00000557559 C9orf131Q5VYM1 1079 aa10.23□□□□□ -0.77
PRKCH-225ENST00000557559 COL5A3P25940 1745 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-225ENST00000557559 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
PRKCH-225ENST00000557559 KCPQ6ZWJ8 1503 aa10.23□□□□□ -0.77
PRKCH-225ENST00000557559 ST20-MTHFSA0A0A6YYL1 179 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 DPEP1P16444 411 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 PRELPP51888 382 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 CDCA8Q53HL2 280 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 COL13A1Q5TAT6 717 aaPredicted RBP10.22□□□□□ -0.77
PRKCH-225ENST00000557559 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 IFNL2Q8IZJ0 200 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 SMC1BQ8NDV3 1235 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 PIM2Q9P1W9 311 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 CNTNAP4Q9C0A0 1308 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 PCNTO95613 3336 aa10.22□□□□□ -0.77
PRKCH-225ENST00000557559 RFC4P35249 363 aa10.21□□□□□ -0.77
PRKCH-225ENST00000557559 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
PRKCH-225ENST00000557559 CAPN15O75808 1086 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 GYS1P13807 737 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 PHKG2P15735 406 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 DALRD3Q5D0E6 543 aaKnown RBP10.2□□□□□ -0.78
PRKCH-225ENST00000557559 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 RNF181Q9P0P0 153 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
PRKCH-225ENST00000557559 WASHC2AQ641Q2 1341 aa10.19□□□□□ -0.78
PRKCH-225ENST00000557559 RPS6KA4O75676 772 aa10.19□□□□□ -0.78
PRKCH-225ENST00000557559 HSP90AB1P08238 724 aaKnown RBP10.19□□□□□ -0.78
PRKCH-225ENST00000557559 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-225ENST00000557559 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
PRKCH-225ENST00000557559 ERVV-2B6SEH9 535 aa10.18□□□□□ -0.78
PRKCH-225ENST00000557559 PPM1GO15355 546 aaPredicted RBP10.18□□□□□ -0.78
PRKCH-225ENST00000557559 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
PRKCH-225ENST00000557559 HTRA3P83110 453 aa10.17□□□□□ -0.78
PRKCH-225ENST00000557559 EYA1Q99502 592 aa10.17□□□□□ -0.78
PRKCH-225ENST00000557559 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
PRKCH-225ENST00000557559 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-225ENST00000557559 KDM6AO15550 1401 aaPredicted RBP10.16□□□□□ -0.78
PRKCH-225ENST00000557559 TIAM2Q8IVF5 1701 aa10.16□□□□□ -0.78
PRKCH-225ENST00000557559 KCNA3P22001 575 aa10.16□□□□□ -0.78
PRKCH-225ENST00000557559 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
PRKCH-225ENST00000557559 SBF1O95248 1867 aa10.15□□□□□ -0.78
PRKCH-225ENST00000557559 USP42Q9H9J4 1324 aaKnown RBP10.15□□□□□ -0.78
PRKCH-225ENST00000557559 HSPA1AP0DMV8 641 aaKnown RBP10.15□□□□□ -0.78
PRKCH-225ENST00000557559 HSPA1BP0DMV9 641 aaKnown RBP10.15□□□□□ -0.78
PRKCH-225ENST00000557559 VEGFAP15692 232 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-225ENST00000557559 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
PRKCH-225ENST00000557559 SLC4A9Q96Q91 983 aa10.14□□□□□ -0.79
PRKCH-225ENST00000557559 MYH14Q7Z406 1995 aaKnown RBP10.14□□□□□ -0.79
PRKCH-225ENST00000557559 TJP1Q07157 1748 aa10.13□□□□□ -0.79
PRKCH-225ENST00000557559 GLTPD2A6NH11 291 aa10.13□□□□□ -0.79
PRKCH-225ENST00000557559 LMNB1P20700 586 aa10.13□□□□□ -0.79
PRKCH-225ENST00000557559 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
PRKCH-225ENST00000557559 CABP4P57796 275 aa10.13□□□□□ -0.79
PRKCH-225ENST00000557559 AMOTQ4VCS5 1084 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms