RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 HTRA3P83110 453 aa17.63■□□□□ 0.41
PSEN1-221ENST00000557293 COL13A1Q5TAT6 717 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-221ENST00000557293 ARHGAP27Q6ZUM4 889 aa17.63■□□□□ 0.41
PSEN1-221ENST00000557293 N4BP2Q86UW6 1770 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-221ENST00000557293 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
PSEN1-221ENST00000557293 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
PSEN1-221ENST00000557293 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
PSEN1-221ENST00000557293 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 RBM46Q8TBY0 533 aaKnown RBP17.61■□□□□ 0.41
PSEN1-221ENST00000557293 EYA1Q99502 592 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.416e-6■□□□□ 8.9
PSEN1-221ENST00000557293 TMOD3Q9NYL9 352 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
PSEN1-221ENST00000557293 PHKG2P15735 406 aa17.6■□□□□ 0.41
PSEN1-221ENST00000557293 TMF1P82094 1093 aa17.6■□□□□ 0.41
PSEN1-221ENST00000557293 ARHGEF1Q92888 912 aaKnown RBP17.6■□□□□ 0.41
PSEN1-221ENST00000557293 GYS1P13807 737 aa17.59■□□□□ 0.41
PSEN1-221ENST00000557293 TRAPPC3LQ5T215 181 aa17.59■□□□□ 0.41
PSEN1-221ENST00000557293 KLRG1Q96E93 195 aa17.59■□□□□ 0.41
PSEN1-221ENST00000557293 KDRP35968 1356 aa17.58■□□□□ 0.4
PSEN1-221ENST00000557293 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.4
PSEN1-221ENST00000557293 FCHSD2O94868 740 aa17.58■□□□□ 0.4
PSEN1-221ENST00000557293 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
PSEN1-221ENST00000557293 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
PSEN1-221ENST00000557293 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
PSEN1-221ENST00000557293 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
PSEN1-221ENST00000557293 WDR90Q96KV7 1748 aa17.57■□□□□ 0.4
PSEN1-221ENST00000557293 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
PSEN1-221ENST00000557293 BRCA1P38398 1863 aaKnown RBP17.55■□□□□ 0.4
PSEN1-221ENST00000557293 FSTL1Q12841 308 aa17.55■□□□□ 0.4
PSEN1-221ENST00000557293 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
PSEN1-221ENST00000557293 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
PSEN1-221ENST00000557293 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
PSEN1-221ENST00000557293 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-221ENST00000557293 ADRA2BP18089 450 aa17.53■□□□□ 0.4
PSEN1-221ENST00000557293 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
PSEN1-221ENST00000557293 RRAGCQ9HB90 399 aa17.53■□□□□ 0.4
PSEN1-221ENST00000557293 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
PSEN1-221ENST00000557293 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
PSEN1-221ENST00000557293 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
PSEN1-221ENST00000557293 PIM2Q9P1W9 311 aa17.52■□□□□ 0.4
PSEN1-221ENST00000557293 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
PSEN1-221ENST00000557293 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
PSEN1-221ENST00000557293 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
PSEN1-221ENST00000557293 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
PSEN1-221ENST00000557293 RFC4P35249 363 aa17.51■□□□□ 0.39
PSEN1-221ENST00000557293 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
PSEN1-221ENST00000557293 DDR1Q08345 913 aa17.5■□□□□ 0.39
PSEN1-221ENST00000557293 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
PSEN1-221ENST00000557293 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
PSEN1-221ENST00000557293 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
PSEN1-221ENST00000557293 EIF4A2Q14240 407 aaKnown RBP17.49■□□□□ 0.39
PSEN1-221ENST00000557293 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
PSEN1-221ENST00000557293 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
PSEN1-221ENST00000557293 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
PSEN1-221ENST00000557293 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-221ENST00000557293 CAPN15O75808 1086 aa17.48■□□□□ 0.39
PSEN1-221ENST00000557293 CHRNA5P30532 468 aa17.48■□□□□ 0.39
PSEN1-221ENST00000557293 FKBP8Q14318 412 aa17.48■□□□□ 0.39
PSEN1-221ENST00000557293 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
PSEN1-221ENST00000557293 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
PSEN1-221ENST00000557293 TM4SF1P30408 202 aa17.47■□□□□ 0.39
PSEN1-221ENST00000557293 PRELPP51888 382 aa17.47■□□□□ 0.39
PSEN1-221ENST00000557293 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
PSEN1-221ENST00000557293 SBF1O95248 1867 aa17.46■□□□□ 0.39
PSEN1-221ENST00000557293 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
PSEN1-221ENST00000557293 CRKLP46109 303 aaKnown RBP17.45■□□□□ 0.38
PSEN1-221ENST00000557293 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
PSEN1-221ENST00000557293 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
PSEN1-221ENST00000557293 POLRMTO00411 1230 aaKnown RBP17.43■□□□□ 0.38
PSEN1-221ENST00000557293 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
PSEN1-221ENST00000557293 CABP4P57796 275 aa17.43■□□□□ 0.38
PSEN1-221ENST00000557293 INTS5Q6P9B9 1019 aaKnown RBP17.43■□□□□ 0.38
PSEN1-221ENST00000557293 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
PSEN1-221ENST00000557293 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
PSEN1-221ENST00000557293 RASSF7Q02833 373 aa17.41■□□□□ 0.38
PSEN1-221ENST00000557293 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-221ENST00000557293 NFATC2IPQ8NCF5 419 aa17.41■□□□□ 0.38
PSEN1-221ENST00000557293 ADAMTS7Q9UKP4 1686 aa17.41■□□□□ 0.38
PSEN1-221ENST00000557293 POTECB2RU33 542 aa17.4■□□□□ 0.38
PSEN1-221ENST00000557293 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
PSEN1-221ENST00000557293 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
PSEN1-221ENST00000557293 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
PSEN1-221ENST00000557293 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
PSEN1-221ENST00000557293 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
PSEN1-221ENST00000557293 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-221ENST00000557293 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-221ENST00000557293 MTHFSP49914 203 aa17.38■□□□□ 0.37
PSEN1-221ENST00000557293 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
PSEN1-221ENST00000557293 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
PSEN1-221ENST00000557293 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
PSEN1-221ENST00000557293 TJP1Q07157 1748 aa17.36■□□□□ 0.37
PSEN1-221ENST00000557293 LMNB1P20700 586 aa17.36■□□□□ 0.37
PSEN1-221ENST00000557293 NFIXQ14938 502 aa17.36■□□□□ 0.37
PSEN1-221ENST00000557293 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
PSEN1-221ENST00000557293 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
PSEN1-221ENST00000557293 DNAJC10Q8IXB1 793 aa17.35■□□□□ 0.37
PSEN1-221ENST00000557293 NFKBIEO00221 500 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms