RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 USP6P35125 1406 aa18.77■□□□□ 0.6
TMEM55B-207ENST00000557041 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.59
TMEM55B-207ENST00000557041 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
TMEM55B-207ENST00000557041 ERC2O15083 957 aa18.76■□□□□ 0.59
TMEM55B-207ENST00000557041 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
TMEM55B-207ENST00000557041 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
TMEM55B-207ENST00000557041 RICTORQ6R327 1708 aa18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 MX1P20591 662 aa18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 PPP1R42Q7Z4L9 355 aa18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 COL3A1P02461 1466 aaPredicted RBP18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 PDE1AP54750 535 aa18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 RIC3Q7Z5B4 369 aa18.75■□□□□ 0.59
TMEM55B-207ENST00000557041 SIRT1Q96EB6 747 aa18.74■□□□□ 0.59
TMEM55B-207ENST00000557041 ATF3P18847 181 aa18.74■□□□□ 0.59
TMEM55B-207ENST00000557041 PIK3R4Q99570 1358 aa18.74■□□□□ 0.59
TMEM55B-207ENST00000557041 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 RABEP1Q15276 862 aa18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 CWC27Q6UX04 472 aaKnown RBP18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
TMEM55B-207ENST00000557041 GCP02774 474 aa18.72■□□□□ 0.59
TMEM55B-207ENST00000557041 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
TMEM55B-207ENST00000557041 NAP1L2Q9ULW6 460 aaPredicted RBP18.72■□□□□ 0.59
TMEM55B-207ENST00000557041 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 PRPF40AO75400 957 aaKnown RBP18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 PLEKHG1Q9ULL1 1385 aa18.71■□□□□ 0.59
TMEM55B-207ENST00000557041 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 RBM25P49756 843 aaKnown RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 CAVIN1Q6NZI2 390 aaKnown RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 DIAPH3Q9NSV4 1193 aa18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
TMEM55B-207ENST00000557041 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
TMEM55B-207ENST00000557041 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
TMEM55B-207ENST00000557041 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
TMEM55B-207ENST00000557041 SPG7Q9UQ90 795 aa18.69■□□□□ 0.58
TMEM55B-207ENST00000557041 MED14O60244 1454 aa18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 NAP1L5Q96NT1 182 aaPredicted RBP18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
TMEM55B-207ENST00000557041 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
TMEM55B-207ENST00000557041 PKP1Q13835 747 aa18.67■□□□□ 0.58
TMEM55B-207ENST00000557041 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 IP6K1Q92551 441 aa18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 FGD1P98174 961 aa18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
TMEM55B-207ENST00000557041 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
TMEM55B-207ENST00000557041 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
TMEM55B-207ENST00000557041 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
TMEM55B-207ENST00000557041 HSPA2P54652 639 aa18.65■□□□□ 0.58
TMEM55B-207ENST00000557041 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
TMEM55B-207ENST00000557041 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
TMEM55B-207ENST00000557041 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
TMEM55B-207ENST00000557041 XRCC6P12956 609 aaKnown RBP eCLIP18.64■□□□□ 0.57
TMEM55B-207ENST00000557041 AACSQ86V21 672 aa18.64■□□□□ 0.57
TMEM55B-207ENST00000557041 UNC5CLQ8IV45 518 aa18.64■□□□□ 0.57
TMEM55B-207ENST00000557041 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
TMEM55B-207ENST00000557041 KLHDC4Q8TBB5 520 aa18.63■□□□□ 0.57
TMEM55B-207ENST00000557041 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
TMEM55B-207ENST00000557041 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
TMEM55B-207ENST00000557041 RHPN1Q8TCX5 695 aa18.63■□□□□ 0.57
TMEM55B-207ENST00000557041 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 NUCB2P80303 420 aa18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 MPNDQ8N594 471 aa18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 SNX21Q969T3 373 aa18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 DBF4Q9UBU7 674 aaPredicted RBP18.62■□□□□ 0.57
TMEM55B-207ENST00000557041 CPA1P15085 419 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 KIAA0232Q92628 1395 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 BOLA2Q9H3K6 86 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 GRPEL1Q9HAV7 217 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 KIF2CQ99661 725 aa18.61■□□□□ 0.57
TMEM55B-207ENST00000557041 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
TMEM55B-207ENST00000557041 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
TMEM55B-207ENST00000557041 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
TMEM55B-207ENST00000557041 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
TMEM55B-207ENST00000557041 KAT6BQ8WYB5 2073 aa18.6■□□□□ 0.57
TMEM55B-207ENST00000557041 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
TMEM55B-207ENST00000557041 MYD88Q99836 296 aa18.59■□□□□ 0.57
TMEM55B-207ENST00000557041 RBM27Q9P2N5 1060 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms