RNA–Protein interactions for RNA: ENST00000556882.1

NEMF-212, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-212ENST00000556882 RNFT1Q5M7Z0 435 aa11.63□□□□□ -0.55
NEMF-212ENST00000556882 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
NEMF-212ENST00000556882 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
NEMF-212ENST00000556882 TIMMDC1Q9NPL8 285 aa11.63□□□□□ -0.55
NEMF-212ENST00000556882 DYRK1BQ9Y463 629 aa11.63□□□□□ -0.55
NEMF-212ENST00000556882 USP17L5A8MUK1 530 aa11.62□□□□□ -0.55
NEMF-212ENST00000556882 INHAP05111 366 aa11.62□□□□□ -0.55
NEMF-212ENST00000556882 TLR1Q15399 786 aa11.62□□□□□ -0.55
NEMF-212ENST00000556882 TMEM214Q6NUQ4 689 aaKnown RBP11.62□□□□□ -0.55
NEMF-212ENST00000556882 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
NEMF-212ENST00000556882 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
NEMF-212ENST00000556882 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
NEMF-212ENST00000556882 NOD1Q9Y239 953 aa11.61□□□□□ -0.55
NEMF-212ENST00000556882 TMEM229AB2RXF0 380 aa11.6□□□□□ -0.55
NEMF-212ENST00000556882 DBN1Q16643 649 aa11.6□□□□□ -0.55
NEMF-212ENST00000556882 C4orf17Q53FE4 359 aa11.6□□□□□ -0.55
NEMF-212ENST00000556882 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
NEMF-212ENST00000556882 ZNF837Q96EG3 531 aaPredicted RBP11.6□□□□□ -0.55
NEMF-212ENST00000556882 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
NEMF-212ENST00000556882 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
NEMF-212ENST00000556882 GTF2IP78347 998 aa11.59□□□□□ -0.55
NEMF-212ENST00000556882 GNASQ5JWF2 1037 aa11.59□□□□□ -0.55
NEMF-212ENST00000556882 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
NEMF-212ENST00000556882 GLMNQ92990 594 aa11.59□□□□□ -0.55
NEMF-212ENST00000556882 GPAMQ9HCL2 828 aa11.58□□□□□ -0.56
NEMF-212ENST00000556882 A6NJR5 290 aa11.57□□□□□ -0.56
NEMF-212ENST00000556882 GPR25O00155 361 aa11.57□□□□□ -0.56
NEMF-212ENST00000556882 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
NEMF-212ENST00000556882 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
NEMF-212ENST00000556882 USP17L3A6NCW0 530 aa11.56□□□□□ -0.56
NEMF-212ENST00000556882 USP17L4A6NCW7 530 aa11.56□□□□□ -0.56
NEMF-212ENST00000556882 USP17L2Q6R6M4 530 aa11.56□□□□□ -0.56
NEMF-212ENST00000556882 USP17L1Q7RTZ2 530 aa11.56□□□□□ -0.56
NEMF-212ENST00000556882 RHBDD1Q8TEB9 315 aa11.56□□□□□ -0.56
NEMF-212ENST00000556882 ATP9BO43861 1147 aa11.55□□□□□ -0.56
NEMF-212ENST00000556882 F11P03951 625 aa11.55□□□□□ -0.56
NEMF-212ENST00000556882 SMTNP53814 917 aa11.55□□□□□ -0.56
NEMF-212ENST00000556882 PSME1Q06323 249 aa11.55□□□□□ -0.56
NEMF-212ENST00000556882 GAS6Q14393 721 aa11.55□□□□□ -0.56
NEMF-212ENST00000556882 H7C1W4 665 aa11.54□□□□□ -0.56
NEMF-212ENST00000556882 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
NEMF-212ENST00000556882 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
NEMF-212ENST00000556882 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 THBS1P07996 1170 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 PLA2G4AP47712 749 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
NEMF-212ENST00000556882 USP3Q9Y6I4 520 aa11.53□□□□□ -0.56
NEMF-212ENST00000556882 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
NEMF-212ENST00000556882 A6NJY4 79 aa11.51□□□□□ -0.57
NEMF-212ENST00000556882 MSX1P28360 303 aa11.51□□□□□ -0.57
NEMF-212ENST00000556882 RUBCNLQ9H714 662 aa11.51□□□□□ -0.57
NEMF-212ENST00000556882 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
NEMF-212ENST00000556882 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
NEMF-212ENST00000556882 KIAA1024Q9UPX6 916 aa11.51□□□□□ -0.57
NEMF-212ENST00000556882 FAM181BA6NEQ2 426 aa11.5□□□□□ -0.57
NEMF-212ENST00000556882 CLDN10P78369 228 aa11.5□□□□□ -0.57
NEMF-212ENST00000556882 MTFR1Q15390 333 aa11.5□□□□□ -0.57
NEMF-212ENST00000556882 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
NEMF-212ENST00000556882 ARID3AQ99856 593 aa11.5□□□□□ -0.57
NEMF-212ENST00000556882 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
NEMF-212ENST00000556882 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
NEMF-212ENST00000556882 FOXR1Q6PIV2 292 aa11.49□□□□□ -0.57
NEMF-212ENST00000556882 TRIM50Q86XT4 487 aa11.49□□□□□ -0.57
NEMF-212ENST00000556882 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
NEMF-212ENST00000556882 IQSEC3Q9UPP2 1182 aaPredicted RBP11.49□□□□□ -0.57
NEMF-212ENST00000556882 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
NEMF-212ENST00000556882 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
NEMF-212ENST00000556882 WHAMMQ8TF30 809 aa11.48□□□□□ -0.57
NEMF-212ENST00000556882 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
NEMF-212ENST00000556882 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 CDK2AP1O14519 115 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 BACH1O14867 736 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
NEMF-212ENST00000556882 MAFBQ9Y5Q3 323 aaPredicted RBP11.47□□□□□ -0.57
NEMF-212ENST00000556882 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
NEMF-212ENST00000556882 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 ATP1A2P50993 1020 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
NEMF-212ENST00000556882 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 PGBD3Q8N328 593 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 DNAAF2Q9NVR5 837 aaKnown RBP11.46□□□□□ -0.57
NEMF-212ENST00000556882 CABP1Q9NZU7 370 aa11.46□□□□□ -0.57
NEMF-212ENST00000556882 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
NEMF-212ENST00000556882 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
NEMF-212ENST00000556882 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
NEMF-212ENST00000556882 MBIPQ9NS73 344 aa11.45□□□□□ -0.58
NEMF-212ENST00000556882 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
NEMF-212ENST00000556882 ATP4AP20648 1035 aa11.44□□□□□ -0.58
NEMF-212ENST00000556882 SRSF11Q05519 484 aaKnown RBP11.44□□□□□ -0.58
NEMF-212ENST00000556882 UBAP2LQ14157 1087 aaKnown RBP11.44□□□□□ -0.58
NEMF-212ENST00000556882 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
NEMF-212ENST00000556882 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
NEMF-212ENST00000556882 SCHIP1Q9P0W5 487 aaPredicted RBP11.44□□□□□ -0.58
NEMF-212ENST00000556882 EPHA4P54764 986 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms