RNA–Protein interactions for RNA: ENST00000556882.1

NEMF-212, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-212ENST00000556882 AEBP2Q6ZN18 517 aaPredicted RBP33.87■■■■□ 3.01
NEMF-212ENST00000556882 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
NEMF-212ENST00000556882 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
NEMF-212ENST00000556882 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
NEMF-212ENST00000556882 FOXD1Q16676 465 aa26.76■■□□□ 1.87
NEMF-212ENST00000556882 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
NEMF-212ENST00000556882 PPP6R1Q9UPN7 881 aa25.49■■□□□ 1.67
NEMF-212ENST00000556882 ADRA2BP18089 450 aa25.45■■□□□ 1.66
NEMF-212ENST00000556882 PIAS4Q8N2W9 510 aaPredicted RBP25.14■■□□□ 1.62
NEMF-212ENST00000556882 MSH5O43196 834 aa24.75■■□□□ 1.55
NEMF-212ENST00000556882 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
NEMF-212ENST00000556882 MAPK8IP2Q13387 824 aaPredicted RBP23.22■■□□□ 1.31
NEMF-212ENST00000556882 PPP4R3CPQ6ZMV5 832 aa23.2■■□□□ 1.3
NEMF-212ENST00000556882 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
NEMF-212ENST00000556882 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
NEMF-212ENST00000556882 CNKSR2Q8WXI2 1034 aa22.6■■□□□ 1.21
NEMF-212ENST00000556882 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
NEMF-212ENST00000556882 KCNA4P22459 653 aa22.28■■□□□ 1.16
NEMF-212ENST00000556882 HOXD11P31277 338 aaPredicted RBP22.26■■□□□ 1.15
NEMF-212ENST00000556882 RNF216Q9NWF9 866 aaPredicted RBP22.24■■□□□ 1.15
NEMF-212ENST00000556882 NPM3O75607 178 aaKnown RBP22.17■■□□□ 1.14
NEMF-212ENST00000556882 DCAF8L1A6NGE4 600 aa21.97■■□□□ 1.11
NEMF-212ENST00000556882 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
NEMF-212ENST00000556882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
NEMF-212ENST00000556882 RNF39Q9H2S5 420 aa21.2■□□□□ 0.98
NEMF-212ENST00000556882 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
NEMF-212ENST00000556882 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
NEMF-212ENST00000556882 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
NEMF-212ENST00000556882 C1QBPQ07021 282 aaKnown RBP20.89■□□□□ 0.93
NEMF-212ENST00000556882 U3KPZ7 1027 aaPredicted RBP20.88■□□□□ 0.93
NEMF-212ENST00000556882 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
NEMF-212ENST00000556882 ZBTB22O15209 634 aa20.51■□□□□ 0.87
NEMF-212ENST00000556882 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
NEMF-212ENST00000556882 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
NEMF-212ENST00000556882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.39■□□□□ 0.85
NEMF-212ENST00000556882 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.85
NEMF-212ENST00000556882 CAPN15O75808 1086 aa20.34■□□□□ 0.85
NEMF-212ENST00000556882 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
NEMF-212ENST00000556882 APLP2Q06481 763 aa20.25■□□□□ 0.83
NEMF-212ENST00000556882 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
NEMF-212ENST00000556882 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
NEMF-212ENST00000556882 ZNF219Q9P2Y4 722 aaPredicted RBP20.08■□□□□ 0.81
NEMF-212ENST00000556882 DSG3P32926 999 aa20.07■□□□□ 0.8
NEMF-212ENST00000556882 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
NEMF-212ENST00000556882 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
NEMF-212ENST00000556882 ABCB7O75027 752 aa19.95■□□□□ 0.78
NEMF-212ENST00000556882 ATXN8OSP0DMR3 200 aa19.82■□□□□ 0.76
NEMF-212ENST00000556882 POLA2Q14181 598 aa19.74■□□□□ 0.75
NEMF-212ENST00000556882 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
NEMF-212ENST00000556882 FBLN2P98095 1184 aa19.11■□□□□ 0.65
NEMF-212ENST00000556882 MKRN4PQ13434 485 aaPredicted RBP19.1■□□□□ 0.65
NEMF-212ENST00000556882 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
NEMF-212ENST00000556882 RBM42Q9BTD8 480 aaKnown RBP19.07■□□□□ 0.64
NEMF-212ENST00000556882 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
NEMF-212ENST00000556882 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
NEMF-212ENST00000556882 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
NEMF-212ENST00000556882 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
NEMF-212ENST00000556882 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
NEMF-212ENST00000556882 REM2Q8IYK8 340 aaPredicted RBP18.63■□□□□ 0.57
NEMF-212ENST00000556882 SSUH2Q9Y2M2 353 aa18.62■□□□□ 0.57
NEMF-212ENST00000556882 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
NEMF-212ENST00000556882 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
NEMF-212ENST00000556882 PITPNM1O00562 1244 aa18.45■□□□□ 0.54
NEMF-212ENST00000556882 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
NEMF-212ENST00000556882 POTEHQ6S545 545 aa18.32■□□□□ 0.52
NEMF-212ENST00000556882 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
NEMF-212ENST00000556882 CLEC11AQ9Y240 323 aa18.32■□□□□ 0.52
NEMF-212ENST00000556882 PIP4P2Q8N4L2 257 aa18.18■□□□□ 0.5
NEMF-212ENST00000556882 FKBP8Q14318 412 aa18.17■□□□□ 0.5
NEMF-212ENST00000556882 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.49
NEMF-212ENST00000556882 PROM2Q8N271 834 aa18.08■□□□□ 0.48
NEMF-212ENST00000556882 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
NEMF-212ENST00000556882 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
NEMF-212ENST00000556882 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
NEMF-212ENST00000556882 CHADLQ6NUI6 762 aa17.94■□□□□ 0.46
NEMF-212ENST00000556882 CREBZFQ9NS37 354 aa17.77■□□□□ 0.44
NEMF-212ENST00000556882 HAX1O00165 279 aa17.69■□□□□ 0.42
NEMF-212ENST00000556882 FARP1Q9Y4F1 1045 aaPredicted RBP17.68■□□□□ 0.42
NEMF-212ENST00000556882 EVX2Q03828 476 aa17.57■□□□□ 0.4
NEMF-212ENST00000556882 MIER1Q8N108 512 aa17.56■□□□□ 0.4
NEMF-212ENST00000556882 C19orf67A6NJJ6 358 aa17.54■□□□□ 0.4
NEMF-212ENST00000556882 MNX1P50219 401 aaPredicted RBP17.54■□□□□ 0.4
NEMF-212ENST00000556882 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
NEMF-212ENST00000556882 PLCD3Q8N3E9 789 aa17.49■□□□□ 0.39
NEMF-212ENST00000556882 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
NEMF-212ENST00000556882 SP7Q8TDD2 431 aaPredicted RBP17.44■□□□□ 0.38
NEMF-212ENST00000556882 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
NEMF-212ENST00000556882 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
NEMF-212ENST00000556882 VASPP50552 380 aaPredicted RBP17.36■□□□□ 0.37
NEMF-212ENST00000556882 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
NEMF-212ENST00000556882 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
NEMF-212ENST00000556882 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
NEMF-212ENST00000556882 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
NEMF-212ENST00000556882 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
NEMF-212ENST00000556882 GABBR2O75899 941 aa17.16■□□□□ 0.34
NEMF-212ENST00000556882 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
NEMF-212ENST00000556882 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
NEMF-212ENST00000556882 NUBP1P53384 320 aa17.15■□□□□ 0.34
NEMF-212ENST00000556882 IFNLR1Q8IU57 520 aaPredicted RBP17.13■□□□□ 0.33
NEMF-212ENST00000556882 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms