RNA–Protein interactions for RNA: ENST00000556736.5

MEG3-227, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 1,689 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-227ENST00000556736 TNNQ9UQP3 1299 aa23.22■■□□□ 1.31
MEG3-227ENST00000556736 KDM6AO15550 1401 aaPredicted RBP23.22■■□□□ 1.31
MEG3-227ENST00000556736 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
MEG3-227ENST00000556736 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
MEG3-227ENST00000556736 HOXB7P09629 217 aa23.21■■□□□ 1.31
MEG3-227ENST00000556736 JCADQ9P266 1359 aa23.21■■□□□ 1.31
MEG3-227ENST00000556736 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
MEG3-227ENST00000556736 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
MEG3-227ENST00000556736 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
MEG3-227ENST00000556736 CCDC30Q5VVM6 783 aa23.2■■□□□ 1.3
MEG3-227ENST00000556736 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
MEG3-227ENST00000556736 SIPA1L3O60292 1781 aaPredicted RBP23.19■■□□□ 1.3
MEG3-227ENST00000556736 EIF4A1P60842 406 aaKnown RBP23.19■■□□□ 1.3
MEG3-227ENST00000556736 STK31Q9BXU1 1019 aa23.19■■□□□ 1.3
MEG3-227ENST00000556736 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
MEG3-227ENST00000556736 PLCH1Q4KWH8 1693 aa23.19■■□□□ 1.3
MEG3-227ENST00000556736 MRC1P22897 1456 aa23.19■■□□□ 1.3
MEG3-227ENST00000556736 PTPRCP08575 1304 aa23.18■■□□□ 1.3
MEG3-227ENST00000556736 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
MEG3-227ENST00000556736 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
MEG3-227ENST00000556736 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
MEG3-227ENST00000556736 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
MEG3-227ENST00000556736 ITPRIPQ8IWB1 547 aa23.16■■□□□ 1.3
MEG3-227ENST00000556736 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
MEG3-227ENST00000556736 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
MEG3-227ENST00000556736 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
MEG3-227ENST00000556736 ABCC4O15439 1325 aa23.15■■□□□ 1.3
MEG3-227ENST00000556736 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
MEG3-227ENST00000556736 DISP2A7MBM2 1401 aa23.14■■□□□ 1.3
MEG3-227ENST00000556736 NWD2Q9ULI1 1742 aa23.14■■□□□ 1.29
MEG3-227ENST00000556736 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
MEG3-227ENST00000556736 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
MEG3-227ENST00000556736 NRAPQ86VF7 1730 aa23.13■■□□□ 1.29
MEG3-227ENST00000556736 KCNQ3O43525 872 aa23.13■■□□□ 1.29
MEG3-227ENST00000556736 CENPQQ7L2Z9 268 aaPredicted RBP23.13■■□□□ 1.29
MEG3-227ENST00000556736 CDCA7Q9BWT1 371 aaPredicted RBP23.13■■□□□ 1.29
MEG3-227ENST00000556736 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 SLIT2O94813 1529 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 ERVV-2B6SEH9 535 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 CABP4P57796 275 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 ZNF790Q6PG37 636 aa23.12■■□□□ 1.29
MEG3-227ENST00000556736 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
MEG3-227ENST00000556736 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
MEG3-227ENST00000556736 DDX54Q8TDD1 881 aaKnown RBP23.1■■□□□ 1.29
MEG3-227ENST00000556736 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
MEG3-227ENST00000556736 SPATA31A1Q5TZJ5 1347 aa23.09■■□□□ 1.29
MEG3-227ENST00000556736 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
MEG3-227ENST00000556736 CACNA1FO60840 1977 aa23.09■■□□□ 1.29
MEG3-227ENST00000556736 TTC5Q8N0Z6 440 aa23.08■■□□□ 1.29
MEG3-227ENST00000556736 RGS12O14924 1447 aa23.07■■□□□ 1.28
MEG3-227ENST00000556736 FLIIQ13045 1269 aa23.06■■□□□ 1.28
MEG3-227ENST00000556736 INTS3Q68E01 1043 aaKnown RBP23.06■■□□□ 1.28
MEG3-227ENST00000556736 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
MEG3-227ENST00000556736 ZBTB40Q9NUA8 1239 aa23.06■■□□□ 1.28
MEG3-227ENST00000556736 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
MEG3-227ENST00000556736 EXOC5O00471 708 aa23.06■■□□□ 1.28
MEG3-227ENST00000556736 EIF2S2P20042 333 aaKnown RBP23.06■■□□□ 1.28
MEG3-227ENST00000556736 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
MEG3-227ENST00000556736 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
MEG3-227ENST00000556736 SLC39A6Q13433 755 aa23.05■■□□□ 1.28
MEG3-227ENST00000556736 G2E3Q7L622 706 aa23.05■■□□□ 1.28
MEG3-227ENST00000556736 UNC5CLQ8IV45 518 aa23.04■■□□□ 1.28
MEG3-227ENST00000556736 TNS2Q63HR2 1409 aa23.04■■□□□ 1.28
MEG3-227ENST00000556736 ZBTB7BO15156 539 aaPredicted RBP23.03■■□□□ 1.28
MEG3-227ENST00000556736 NGLY1Q96IV0 654 aa23.03■■□□□ 1.28
MEG3-227ENST00000556736 FMNL2Q96PY5 1086 aa23.03■■□□□ 1.28
MEG3-227ENST00000556736 DBF4Q9UBU7 674 aaPredicted RBP23.03■■□□□ 1.28
MEG3-227ENST00000556736 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
MEG3-227ENST00000556736 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
MEG3-227ENST00000556736 RWDD1Q9H446 243 aaPredicted RBP23.03■■□□□ 1.28
MEG3-227ENST00000556736 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
MEG3-227ENST00000556736 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
MEG3-227ENST00000556736 CHPF2Q9P2E5 772 aa23.02■■□□□ 1.28
MEG3-227ENST00000556736 CCT4P50991 539 aaKnown RBP23.01■■□□□ 1.27
MEG3-227ENST00000556736 ZNF496Q96IT1 587 aaPredicted RBP23.01■■□□□ 1.27
MEG3-227ENST00000556736 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
MEG3-227ENST00000556736 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
MEG3-227ENST00000556736 HSPA1LP34931 641 aa23■■□□□ 1.27
MEG3-227ENST00000556736 FNBP4Q8N3X1 1017 aaPredicted RBP23■■□□□ 1.27
MEG3-227ENST00000556736 LRP6O75581 1613 aa23■■□□□ 1.27
MEG3-227ENST00000556736 IGHDP01880 384 aa22.99■■□□□ 1.27
MEG3-227ENST00000556736 TMOD3Q9NYL9 352 aa22.99■■□□□ 1.27
MEG3-227ENST00000556736 PXDNLA1KZ92 1463 aa22.98■■□□□ 1.27
MEG3-227ENST00000556736 VPS72Q15906 364 aa22.98■■□□□ 1.27
MEG3-227ENST00000556736 DDB1Q16531 1140 aa22.98■■□□□ 1.27
MEG3-227ENST00000556736 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
MEG3-227ENST00000556736 HDAC1Q13547 482 aaPredicted RBP22.97■■□□□ 1.27
MEG3-227ENST00000556736 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
MEG3-227ENST00000556736 TOGARAM1Q9Y4F4 1720 aa22.97■■□□□ 1.27
MEG3-227ENST00000556736 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
MEG3-227ENST00000556736 PAPPAQ13219 1627 aa22.96■■□□□ 1.27
MEG3-227ENST00000556736 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
MEG3-227ENST00000556736 F6X3S4 739 aa22.96■■□□□ 1.27
MEG3-227ENST00000556736 SLC4A10Q6U841 1118 aa22.96■■□□□ 1.27
MEG3-227ENST00000556736 DDX21Q9NR30 783 aaKnown RBP eCLIP22.96■■□□□ 1.27
MEG3-227ENST00000556736 C5P01031 1676 aa22.94■■□□□ 1.26
MEG3-227ENST00000556736 UBR2Q8IWV8 1755 aa22.94■■□□□ 1.26
MEG3-227ENST00000556736 MEX3CQ5U5Q3 659 aaKnown RBP22.93■■□□□ 1.26
MEG3-227ENST00000556736 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms