RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SOX11P35716 441 aa8.24□□□□□ -1.09
ATXN3-243ENST00000556671 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
ATXN3-243ENST00000556671 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-243ENST00000556671 FHDC1Q9C0D6 1143 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-243ENST00000556671 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
ATXN3-243ENST00000556671 KIF21AQ7Z4S6 1674 aa8.24□□□□□ -1.09
ATXN3-243ENST00000556671 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
ATXN3-243ENST00000556671 SRSF11Q05519 484 aaKnown RBP8.23□□□□□ -1.09
ATXN3-243ENST00000556671 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
ATXN3-243ENST00000556671 OXLD1Q5BKU9 147 aa8.23□□□□□ -1.09
ATXN3-243ENST00000556671 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
ATXN3-243ENST00000556671 WHAMMQ8TF30 809 aa8.23□□□□□ -1.09
ATXN3-243ENST00000556671 SIRT1Q96EB6 747 aa8.23□□□□□ -1.09
ATXN3-243ENST00000556671 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-243ENST00000556671 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
ATXN3-243ENST00000556671 MAP7D1Q3KQU3 841 aa8.22□□□□□ -1.09
ATXN3-243ENST00000556671 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
ATXN3-243ENST00000556671 ETNK1Q9HBU6 452 aa8.22□□□□□ -1.09
ATXN3-243ENST00000556671 GPR25O00155 361 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
ATXN3-243ENST00000556671 F11P03951 625 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 PLPP7Q8NBV4 271 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
ATXN3-243ENST00000556671 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
ATXN3-243ENST00000556671 KCNMA1Q12791 1236 aa8.2□□□□□ -1.1
ATXN3-243ENST00000556671 GTPBP3Q969Y2 492 aaKnown RBP8.2□□□□□ -1.1
ATXN3-243ENST00000556671 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
ATXN3-243ENST00000556671 SCNN1DP51172 638 aa8.19□□□□□ -1.1
ATXN3-243ENST00000556671 C4orf17Q53FE4 359 aa8.19□□□□□ -1.1
ATXN3-243ENST00000556671 GNASQ5JWF2 1037 aa8.19□□□□□ -1.1
ATXN3-243ENST00000556671 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
ATXN3-243ENST00000556671 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
ATXN3-243ENST00000556671 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 THBS1P07996 1170 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-243ENST00000556671 PHKA2P46019 1235 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 GSK3AP49840 483 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
ATXN3-243ENST00000556671 RHBDD1Q8TEB9 315 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 POM121Q96HA1 1249 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 TRERF1Q96PN7 1200 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
ATXN3-243ENST00000556671 PIK3CDO00329 1044 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 INHAP05111 366 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 GDF10P55107 478 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 TLR1Q15399 786 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
ATXN3-243ENST00000556671 ALG2Q9H553 416 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
ATXN3-243ENST00000556671 IGF1RP08069 1367 aa8.16□□□□□ -1.1
ATXN3-243ENST00000556671 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-243ENST00000556671 FLIIQ13045 1269 aa8.16□□□□□ -1.1
ATXN3-243ENST00000556671 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
ATXN3-243ENST00000556671 PDS5BQ9NTI5 1447 aa8.16□□□□□ -1.1
ATXN3-243ENST00000556671 RNF225M0QZC1 329 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-243ENST00000556671 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
ATXN3-243ENST00000556671 WWC1Q8IX03 1113 aa8.15□□□□□ -1.1
ATXN3-243ENST00000556671 RAD21O60216 631 aa8.14□□□□□ -1.11
ATXN3-243ENST00000556671 MSX1P28360 303 aa8.14□□□□□ -1.11
ATXN3-243ENST00000556671 MAP3K10Q02779 954 aa8.14□□□□□ -1.11
ATXN3-243ENST00000556671 UBAP2LQ14157 1087 aaKnown RBP8.14□□□□□ -1.11
ATXN3-243ENST00000556671 CFHR5Q9BXR6 569 aa8.14□□□□□ -1.11
ATXN3-243ENST00000556671 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 SKIP12755 728 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 MX2P20592 715 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 SMTNP53814 917 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 NFATC2IPQ8NCF5 419 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 PCDHGA11Q9Y5H2 935 aa8.13□□□□□ -1.11
ATXN3-243ENST00000556671 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-243ENST00000556671 CSB-PGBD3P0DP91 1061 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
ATXN3-243ENST00000556671 RASSF7Q02833 373 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 EML3Q32P44 896 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 PGBD3Q8N328 593 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
ATXN3-243ENST00000556671 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 MARSP56192 900 aaKnown RBP8.11□□□□□ -1.11
ATXN3-243ENST00000556671 MTFR1Q15390 333 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 ACDQ96AP0 544 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 CRISPLD1Q9H336 500 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 ENAMQ9NRM1 1142 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 NSFL1CQ9UNZ2 370 aaKnown RBP8.11□□□□□ -1.11
ATXN3-243ENST00000556671 NOD1Q9Y239 953 aa8.11□□□□□ -1.11
ATXN3-243ENST00000556671 BCRP11274 1271 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 EFHC2Q5JST6 749 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 TMEM151AQ8N4L1 468 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 NIFKQ9BYG3 293 aaKnown RBP8.1□□□□□ -1.11
ATXN3-243ENST00000556671 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-243ENST00000556671 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
ATXN3-243ENST00000556671 CFTRP13569 1480 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 A6NJY4 79 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms