RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
CPSF2-205ENST00000556622 AP1G2O75843 785 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 NANOS1Q8WY41 292 aaKnown RBP8.72□□□□□ -1.01
CPSF2-205ENST00000556622 TSC1Q92574 1164 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 CCNB3Q8WWL7 1395 aa8.72□□□□□ -1.01
CPSF2-205ENST00000556622 FIGNL2A6NMB9 653 aa8.71□□□□□ -1.02
CPSF2-205ENST00000556622 TTLL8A6PVC2 850 aa8.71□□□□□ -1.02
CPSF2-205ENST00000556622 USP17L8P0C7I0 530 aa8.71□□□□□ -1.02
CPSF2-205ENST00000556622 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.02
CPSF2-205ENST00000556622 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.02
CPSF2-205ENST00000556622 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
CPSF2-205ENST00000556622 CCDC18Q5T9S5 1454 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPSF2-205ENST00000556622 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
CPSF2-205ENST00000556622 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
CPSF2-205ENST00000556622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPSF2-205ENST00000556622 PLCH2O75038 1416 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 FYCO1Q9BQS8 1478 aa8.7□□□□□ -1.02
CPSF2-205ENST00000556622 ADAM23O75077 832 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 FOXK2Q01167 660 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
CPSF2-205ENST00000556622 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 FANCAO15360 1455 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 NEO1Q92859 1461 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 ARAP3Q8WWN8 1544 aa8.69□□□□□ -1.02
CPSF2-205ENST00000556622 FSHRP23945 695 aa8.68□□□□□ -1.02
CPSF2-205ENST00000556622 SH3RF1Q7Z6J0 888 aa8.68□□□□□ -1.02
CPSF2-205ENST00000556622 VWA5B2Q8N398 1253 aa8.68□□□□□ -1.02
CPSF2-205ENST00000556622 GJD4Q96KN9 370 aaPredicted RBP8.68□□□□□ -1.02
CPSF2-205ENST00000556622 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
CPSF2-205ENST00000556622 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
CPSF2-205ENST00000556622 PCF11O94913 1555 aaKnown RBP8.68□□□□□ -1.02
CPSF2-205ENST00000556622 ITGB2P05107 769 aa8.67□□□□□ -1.02
CPSF2-205ENST00000556622 LRRIQ1Q96JM4 1722 aa8.67□□□□□ -1.02
CPSF2-205ENST00000556622 TSEN34Q9BSV6 310 aaKnown RBP8.67□□□□□ -1.02
CPSF2-205ENST00000556622 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
CPSF2-205ENST00000556622 CFDP1Q9UEE9 299 aaPredicted RBP8.67□□□□□ -1.02
CPSF2-205ENST00000556622 DENND4BO75064 1496 aaPredicted RBP8.66□□□□□ -1.02
CPSF2-205ENST00000556622 SCAPERQ9BY12 1400 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 CDC14CA4D256 554 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 AGERQ15109 404 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 NR6A1Q15406 480 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 AFAP1Q8N556 730 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 FKBPLQ9UIM3 349 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 GPSM3Q9Y4H4 160 aa8.66□□□□□ -1.02
CPSF2-205ENST00000556622 TTC37Q6PGP7 1564 aa8.65□□□□□ -1.02
CPSF2-205ENST00000556622 SLC35F4A4IF30 521 aa8.65□□□□□ -1.02
CPSF2-205ENST00000556622 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
CPSF2-205ENST00000556622 SCARF2Q96GP6 870 aaPredicted RBP8.65□□□□□ -1.02
CPSF2-205ENST00000556622 KIF14Q15058 1648 aa8.65□□□□□ -1.03
CPSF2-205ENST00000556622 DHX57Q6P158 1386 aaKnown RBP8.64□□□□□ -1.03
CPSF2-205ENST00000556622 ITGA6P23229 1130 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 HNRNPMP52272 730 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPSF2-205ENST00000556622 PLA2G4EQ3MJ16 856 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 BPHLQ86WA6 291 aaPredicted RBP8.64□□□□□ -1.03
CPSF2-205ENST00000556622 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 SPOCK3Q9BQ16 436 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 TIAM1Q13009 1591 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 ADGRL1O94910 1474 aa8.64□□□□□ -1.03
CPSF2-205ENST00000556622 CBLBQ13191 982 aa8.63□□□□□ -1.03
CPSF2-205ENST00000556622 NEUROD1Q13562 356 aa8.63□□□□□ -1.03
CPSF2-205ENST00000556622 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
CPSF2-205ENST00000556622 MYO5CQ9NQX4 1742 aa8.63□□□□□ -1.03
CPSF2-205ENST00000556622 CFAP74Q9C0B2 1584 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 MSTNO14793 375 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 KANK4Q5T7N3 995 aaPredicted RBP8.62□□□□□ -1.03
CPSF2-205ENST00000556622 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 LRRC9Q6ZRR7 1453 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 SETD5Q9C0A6 1442 aa8.62□□□□□ -1.03
CPSF2-205ENST00000556622 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CPSF2-205ENST00000556622 MLECQ14165 292 aa8.61□□□□□ -1.03
CPSF2-205ENST00000556622 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
CPSF2-205ENST00000556622 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
CPSF2-205ENST00000556622 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
CPSF2-205ENST00000556622 GPATCH8Q9UKJ3 1502 aaKnown RBP8.6□□□□□ -1.03
CPSF2-205ENST00000556622 SPINT1O43278 529 aa8.6□□□□□ -1.03
CPSF2-205ENST00000556622 GPR37L1O60883 481 aa8.6□□□□□ -1.03
CPSF2-205ENST00000556622 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
CPSF2-205ENST00000556622 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
CPSF2-205ENST00000556622 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
CPSF2-205ENST00000556622 ZNF644Q9H582 1327 aaPredicted RBP8.59□□□□□ -1.03
CPSF2-205ENST00000556622 APBB1O00213 710 aa8.59□□□□□ -1.03
CPSF2-205ENST00000556622 PROCP04070 461 aa8.59□□□□□ -1.03
CPSF2-205ENST00000556622 CCDC116Q8IYX3 515 aa8.59□□□□□ -1.03
CPSF2-205ENST00000556622 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
CPSF2-205ENST00000556622 CDC42BPBQ9Y5S2 1711 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms